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Quantifying local malignant adaptation in tissue-specific evolutionary trajectories by harnessing cancer’s repeatability at the genetic level
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Genomic Evolution of Breast Cancer Metastasis and Relapse
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Cellular Pliancy and the Multistep Process of Tumorigenesis
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The Life History of 21 Breast Cancers
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Universal Patterns of Selection in Cancer and Somatic Tissues
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Multiclonal Invasion in Breast Tumors Identified by Topographic Single Cell Sequencing
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High-Definition Reconstruction of Clonal Composition in Cancer
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The Age Distribution of Cancer and a Multi-stage Theory of Carcinogenesis
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Integrative clinical genomics of metastatic cancer
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Cell plasticity in epithelial homeostasis and tumorigenesis
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Dynamic clonal equilibrium and predetermined cancer risk in Barrett’s oesophagus
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Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes
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Pan-cancer patterns of somatic copy number alteration
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Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications
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A stemness-related ZEB1–MSRB3 axis governs cellular pliancy and breast cancer genome stability
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IntOGen-mutations identifies cancer drivers across tumor types
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Cancer as a dysregulated epigenome allowing cellular growth advantage at the expense of the host
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Determinants and clinical implications of chromosomal instability in cancer
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Evolution of Barrett’s esophagus through space and time at single-crypt and whole-biopsy levels
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Mapping the in vivo fitness landscape of lung adenocarcinoma tumor suppression in mice
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Detecting repeated cancer evolution from multi-region tumor sequencing data
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Distinct Sets of Genetic Alterations in Melanoma
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Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing
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Effect of Mutation Order on Myeloproliferative Neoplasms
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The Genetic Evolution of Melanoma from Precursor Lesions
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Allele-specific copy number analysis of tumors
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Stochastic modeling reveals an evolutionary mechanism underlying elevated rates of childhood leukemia
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Cancer tumors as Metazoa 1.0: tapping genes of ancient ancestors
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CalMaTe: a method and software to improve allele-specific copy number of SNP arrays for downstream segmentation
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Cancer progression models and fitness landscapes: a many-to-many relationship
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Divergent and convergent evolution in metastases suggest treatment strategies based on specific metastatic sites
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The Effect of Selection Environment on the Probability of Parallel Evolution
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Functional impact bias reveals cancer drivers
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Antibiotic collateral sensitivity is contingent on the repeatability of evolution
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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
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Genetic Structure of Human Populations
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Diminishing Returns Epistasis Among Beneficial Mutations Decelerates Adaptation
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The Clonal Evolution of Tumor Cell Populations
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Clonal status of actionable driver events and the timing of mutational processes in cancer evolution
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Negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome
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Quantifying how constraints limit the diversity of viable routes to adaptation
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Wonderful life: the Burgess Shale and the nature of history
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