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Antibiotic collateral sensitivity is contingent on the repeatability of evolution

https://doi.org/10.1101/185892
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Somatic clonal evolution: A selection-centric perspective
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Exploiting Temporal Collateral Sensitivity in Tumor Clonal Evolution
inferredcites →https://doi.org/10.1038/msb.2013.57openalex-snapshot
Bacterial evolution of antibiotic hypersensitivity
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Empirical fitness landscapes reveal accessible evolutionary paths
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Understanding the limits to generalizability of experimental evolutionary models
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Clonal evolution in cancer
inferredcites →https://doi.org/10.1038/ncomms6792openalex-snapshot
Prediction of antibiotic resistance by gene expression profiles
inferredcites →https://doi.org/10.1038/ncomms8385openalex-snapshot
Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes
inferredcites →https://doi.org/10.1038/ng.1034openalex-snapshot
Evolutionary paths to antibiotic resistance under dynamically sustained drug selection
inferredcites →https://doi.org/10.1038/ng.795openalex-snapshot
A systems analysis of mutational effects in HIV-1 protease and reverse transcriptase
inferredcites →https://doi.org/10.1038/nprot.2013.021openalex-snapshot
Building a morbidostat: an automated continuous-culture device for studying bacterial drug resistance under dynamically sustained drug inhibition
inferredcites →https://doi.org/10.1038/nrg2452openalex-snapshot
Epistasis — the essential role of gene interactions in the structure and evolution of genetic systems
inferredcites →https://doi.org/10.1038/nrg3744openalex-snapshot
Empirical fitness landscapes and the predictability of evolution
inferredcites →https://doi.org/10.1038/nrmicro3380openalex-snapshot
Molecular mechanisms of antibiotic resistance
inferredcites →https://doi.org/10.1038/s41598-017-00791-8openalex-snapshot
Collateral sensitivity networks reveal evolutionary instability and novel treatment strategies in ALK mutated non-small cell lung cancer
inferredcites →https://doi.org/10.1056/nejm2ra025195openalex-snapshot
HIV Drug Resistance
inferredcites →https://doi.org/10.1073/pnas.1409800111openalex-snapshot
Alternating antibiotic treatments constrain evolutionary paths to multidrug resistance
inferredcites →https://doi.org/10.1074/jbc.m110715200openalex-snapshot
EnvZ-OmpR Interaction and Osmoregulation in Escherichia coli
inferredcites →https://doi.org/10.1093/jac/dkv475openalex-snapshot
Combinations of mutations in envZ , ftsI , mrdA , acrB and acrR can cause high-level carbapenem resistance in Escherichia coli
inferredcites →https://doi.org/10.1093/molbev/msu191openalex-snapshot
Strength of Selection Pressure Is an Important Parameter Contributing to the Complexity of Antibiotic Resistance Evolution
inferredcites →https://doi.org/10.1093/molbev/msv006openalex-snapshot
Collateral Resistance and Sensitivity Modulate Evolution of High-Level Resistance to Drug Combination Treatment in Staphylococcus aureus
inferredcites →https://doi.org/10.1093/molbev/msx158openalex-snapshot
Alternative Evolutionary Paths to Bacterial Antibiotic Resistance Cause Distinct Collateral Effects
inferredcites →https://doi.org/10.1093/nar/gkj014openalex-snapshot
ISfinder: the reference centre for bacterial insertion sequences
inferredcites →https://doi.org/10.1099/mgen.0.000062openalex-snapshot
Quantitative assessment of insertion sequence impact on bacterial genome architecture
inferredcites →https://doi.org/10.1101/082107openalex-snapshot
Population diversity jeopardizes the efficacy of antibiotic cycling
inferredcites →https://doi.org/10.1101/gr.074492.107openalex-snapshot
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
inferredcites →https://doi.org/10.1101/gr.107524.110openalex-snapshot
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
inferredcites →https://doi.org/10.1103/physrevlett.106.198102openalex-snapshot
Hidden Randomness between Fitness Landscapes Limits Reverse Evolution
inferredcites →https://doi.org/10.1111/j.1365-2958.2005.04649.xopenalex-snapshot
Maintaining a healthy SPANC balance through regulatory and mutational adaptation
inferredcites →https://doi.org/10.1126/science.1123539openalex-snapshot
Darwinian Evolution Can Follow Only Very Few Mutational Paths to Fitter Proteins
inferredcites →https://doi.org/10.1126/scitranslmed.3006609openalex-snapshot
Use of Collateral Sensitivity Networks to Design Drug Cycling Protocols That Avoid Resistance Development
inferredcites →https://doi.org/10.1126/scitranslmed.3009940openalex-snapshot
Prediction of resistance development against drug combinations by collateral responses to component drugs
inferredcites →https://doi.org/10.1126/scitranslmed.aad7842openalex-snapshot
Exploiting evolutionary principles to prolong tumor control in preclinical models of breast cancer
inferredcites →https://doi.org/10.1128/aac.22.6.942openalex-snapshot
Role of porin proteins OmpF and OmpC in the permeation of beta-lactams
inferredcites →https://doi.org/10.1128/aac.44.2.362-367.2000openalex-snapshot
High-Level Expression of Chromosomally Encoded SHV-1 β-Lactamase and an Outer Membrane Protein Change Confer Resistance to Ceftazidime and Piperacillin- Tazobactam in a Clinical Isolate of Klebsiella pneumoniae
inferredcites →https://doi.org/10.1128/iai.06395-11openalex-snapshot
Loss of Outer Membrane Protein C in Escherichia coli Contributes to Both Antibiotic Resistance and Escaping Antibody-Dependent Bactericidal Activity
inferredcites →https://doi.org/10.1128/mmbr.00016-10openalex-snapshot
Origins and Evolution of Antibiotic Resistance
inferredcites →https://doi.org/10.1158/0008-5472.can-08-3658openalex-snapshot
Adaptive Therapy
inferredcites →https://doi.org/10.1158/1078-0432.ccr-12-2246openalex-snapshot
Analysis of Tumor Specimens at the Time of Acquired Resistance to EGFR-TKI Therapy in 155 Patients with EGFR -Mutant Lung Cancers
inferredcites →https://doi.org/10.1371/journal.pbio.1002104openalex-snapshot
Using a Sequential Regimen to Eliminate Bacteria at Sublethal Antibiotic Dosages
inferredcites →https://doi.org/10.1371/journal.pcbi.1004493openalex-snapshot
Steering Evolution with Sequential Therapy to Prevent the Emergence of Bacterial Antibiotic Resistance
inferredcites →https://doi.org/10.1371/journal.pgen.1002551openalex-snapshot
Exploring the Complexity of the HIV-1 Fitness Landscape
inferredcites →https://doi.org/10.1371/journal.pone.0122283openalex-snapshot
Rational Design of Antibiotic Treatment Plans: A Treatment Strategy for Managing Evolution and Reversing Resistance

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11538-018-0434-2openalex-snapshot
Optimal Therapy Scheduling Based on a Pair of Collaterally Sensitive Drugs
inferred← citeshttps://doi.org/10.1016/s1473-3099(18)30214-7openalex-snapshot
It's too soon to pull the plug on antibiotic cycling
inferred← citeshttps://doi.org/10.1093/molbev/msz303openalex-snapshot
Using Selection by Nonantibiotic Stressors to Sensitize Bacteria to Antibiotics
inferred← citeshttps://doi.org/10.1101/401059openalex-snapshot
Quantifying local malignant adaptation in tissue-specific evolutionary trajectories by harnessing cancer’s repeatability at the genetic level
inferred← citeshttps://doi.org/10.1101/566950openalex-snapshot
Exploiting evolutionary herding to control drug resistance in cancer
inferred← citeshttps://doi.org/10.2147/dddt.s164316openalex-snapshot
Pharmacodynamic considerations of collateral sensitivity in design of antibiotic treatment regimen
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