On the public citation graph

Intrahost speciations and host switches shaped the evolution of herpesviruses

https://doi.org/10.1101/418111
0 signed · 43 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/jmbi.1995.0152openalex-snapshot
Molecular Phylogeny and Evolutionary Timescale for the Family of Mammalian Herpesviruses
inferredcites →https://doi.org/10.1007/s00705-008-0278-4openalex-snapshot
The order Herpesvirales
inferredcites →https://doi.org/10.1007/s00705-018-3847-1openalex-snapshot
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018)
inferredcites →https://doi.org/10.1016/j.vetmic.2009.06.020openalex-snapshot
Herpesviruses—A zoonotic threat?
inferredcites →https://doi.org/10.1016/j.vetmic.2010.02.014openalex-snapshot
Herpesvirus systematics
inferredcites →https://doi.org/10.1016/j.virusres.2006.01.002openalex-snapshot
Topics in herpesvirus genomics and evolution
inferredcites →https://doi.org/10.1016/s0065-3527(03)62006-3openalex-snapshot
Coevolution of Viruses with Hosts and Vectors and Possible Paleontology
inferredcites →https://doi.org/10.1016/s0169-5347(03)00017-xopenalex-snapshot
‘Big bang’ for tertiary birds?
inferredcites →https://doi.org/10.1016/s0169-5347(98)01438-4openalex-snapshot
Trees within trees: phylogeny and historical associations
inferredcites →https://doi.org/10.1016/s0378-1135(01)00492-8openalex-snapshot
Evolution of the herpesviruses
inferredcites →https://doi.org/10.1017/pab.2015.39openalex-snapshot
The Paleobiology Database application programming interface
inferredcites →https://doi.org/10.1017/s1062798700000582openalex-snapshot
Extinction from a paleontological perspective
inferredcites →https://doi.org/10.1051/vetres:2005052openalex-snapshot
Ruminant alphaherpesviruses related to bovine herpesvirus 1
inferredcites →https://doi.org/10.1080/10635150390132704openalex-snapshot
When Do Parasites Fail to Speciate in Response to Host Speciation?
inferredcites →https://doi.org/10.1080/10635150590905911openalex-snapshot
The Effect of Paralogous Lineages on the Application of Reconciliation Analysis by Cophylogeny Mapping
inferredcites →https://doi.org/10.1093/bioinformatics/btr088openalex-snapshot
ProtTest 3: fast selection of best-fit models of protein evolution
inferredcites →https://doi.org/10.1093/molbev/msn083openalex-snapshot
jModelTest: Phylogenetic Model Averaging
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/molbev/msu185openalex-snapshot
Evolutionary Origins of Human Herpes Simplex Viruses 1 and 2
inferredcites →https://doi.org/10.1093/nar/gku1207openalex-snapshot
NCBI Viral Genomes Resource
inferredcites →https://doi.org/10.1093/oso/9780199535033.001.0001openalex-snapshot
The Timetree of Life
inferredcites →https://doi.org/10.1093/ve/veaa001openalex-snapshot
The evolution of protein domain repertoires: Shedding light on the origins of the Herpesviridae family
inferredcites →https://doi.org/10.1098/rspb.2012.0683openalex-snapshot
Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny
inferredcites →https://doi.org/10.1098/rstb.2011.0023openalex-snapshot
The historical biogeography of Mammalia
inferredcites →https://doi.org/10.1111/evo.12837openalex-snapshot
Host population bottlenecks drive parasite extinction during antagonistic coevolution
inferredcites →https://doi.org/10.1111/nph.12150openalex-snapshot
Cospeciation vs host‐shift speciation: methods for testing, evidence from natural associations and relation to coevolution
inferredcites →https://doi.org/10.1126/sciadv.1501005openalex-snapshot
A new time tree reveals Earth history’s imprint on the evolution of modern birds
inferredcites →https://doi.org/10.1127/0078-0421/2012/0020openalex-snapshot
On The Geologic Time Scale
inferredcites →https://doi.org/10.1128/genomea.00781-15openalex-snapshot
Complete Genome Sequences of Mandrillus leucophaeus and Papio ursinus Cytomegaloviruses
inferredcites →https://doi.org/10.1128/jvi.02646-07openalex-snapshot
Novel Mammalian Herpesviruses and Lineages within the Gammaherpesvirinae : Cospeciation and Interspecies Transfer
inferredcites →https://doi.org/10.1128/jvi.74.22.10401-10406.2000openalex-snapshot
Toward a Comprehensive Phylogeny for Mammalian and Avian Herpesviruses
inferredcites →https://doi.org/10.1128/jvi.79.2.725-731.2005openalex-snapshot
Integrating Reptilian Herpesviruses into the Family Herpesviridae
inferredcites →https://doi.org/10.1128/jvi.79.23.14967-14970.2005openalex-snapshot
Common Ancestry of Herpesviruses and Tailed DNA Bacteriophages
inferredcites →https://doi.org/10.1128/mbio.01425-16openalex-snapshot
Bats, Primates, and the Evolutionary Origins and Diversification of Mammalian Gammaherpesviruses
inferredcites →https://doi.org/10.1146/annurev-genet-110711-155522openalex-snapshot
Rules of Engagement: Molecular Insights from Host-Virus Arms Races
inferredcites →https://doi.org/10.1186/1748-7188-5-16openalex-snapshot
Jane: a new tool for the cophylogeny reconstruction problem
inferredcites →https://doi.org/10.1371/journal.pcbi.1003537openalex-snapshot
BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
inferredcites →https://doi.org/10.1371/journal.pone.0022136openalex-snapshot
Rise of the Earliest Tetrapods: An Early Devonian Origin from Marine Environment
inferredcites →https://doi.org/10.1371/journal.pone.0049521openalex-snapshot
Macroevolutionary Dynamics and Historical Biogeography of Primate Diversification Inferred from a Species Supermatrix
inferredcites →https://doi.org/10.1371/journal.ppat.1004395openalex-snapshot
The Evolution and Genetics of Virus Host Shifts
inferredcites →https://doi.org/10.1371/journal.ppat.1006215openalex-snapshot
Comparative analysis estimates the relative frequencies of co-divergence and cross-species transmission within viral families
inferredcites →https://doi.org/10.3389/fmicb.2017.01557openalex-snapshot
Protein–Protein Interactions in Virus–Host Systems

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.15252/embj.2021109217openalex-snapshot
Varicella‐Zoster virus ORF9 is an antagonist of the DNA sensor cGAS
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.