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Fundamental Theory of the Evolution Force (FTEF): Gene Engineering utilizing Synthetic Evolution Artificial Intelligence (SYN-AI)
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/pro.288openalex-snapshot
Sequence periodicity and secondary structure propensity in model proteins
inferredcites →https://doi.org/10.1006/jtbi.2002.3102openalex-snapshot
Predicting Out-of-Sequence Reassembly in DNA Shuffling
inferredcites →https://doi.org/10.1007/s00239-004-0224-3openalex-snapshot
Evolution of the Genetic Triplet Code via Two Types of Doublet Codons
inferredcites →https://doi.org/10.1016/0022-2836(68)90392-6openalex-snapshot
The origin of the genetic code
inferredcites →https://doi.org/10.1016/0022-2836(68)90414-2openalex-snapshot
Kinetics of renaturation of DNA
inferredcites →https://doi.org/10.1016/j.biosystems.2011.11.006openalex-snapshot
On the origin of three base periodicity in genomes
inferredcites →https://doi.org/10.1016/j.biosystems.2014.06.007openalex-snapshot
Engineering cellulosic bioreactors by template assisted DNA shuffling and in vitro recombination (TADSir)
inferredcites →https://doi.org/10.1016/j.gene.2004.02.028openalex-snapshot
Anticodon and wobble evolution
inferredcites →https://doi.org/10.1016/j.gene.2004.11.019openalex-snapshot
Mutation and selection on the anticodon of tRNA genes in vertebrate mitochondrial genomes
inferredcites →https://doi.org/10.1016/j.str.2011.04.006openalex-snapshot
Protein-Protein Complex Structure Predictions by Multimeric Threading and Template Recombination
inferredcites →https://doi.org/10.1016/j.tig.2004.09.001openalex-snapshot
The altered evolutionary trajectories of gene duplicates
inferredcites →https://doi.org/10.1016/j.tig.2014.02.002openalex-snapshot
Comparative population genomics: power and principles for the inference of functionality
inferredcites →https://doi.org/10.1016/s0022-2836(66)80022-0openalex-snapshot
Codon—anticodon pairing: The wobble hypothesis
inferredcites →https://doi.org/10.1016/s0168-9525(02)02755-5openalex-snapshot
Adaptive evolution after gene duplication
inferredcites →https://doi.org/10.1016/s0169-5347(03)00033-8openalex-snapshot
Evolution by gene duplication: an update
inferredcites →https://doi.org/10.1021/bi8007559openalex-snapshot
Variations in Clique and Community Patterns in Protein Structures during Allosteric Communication: Investigation of Dynamically Equilibrated Structures of Methionyl tRNA Synthetase Complexes
inferredcites →https://doi.org/10.1021/ja010041aopenalex-snapshot
A Simple, High-Resolution Method for Establishing DNA Binding Affinity and Sequence Selectivity
inferredcites →https://doi.org/10.1038/325728a0openalex-snapshot
Coevolution of codon usage and transfer RNA abundance
inferredcites →https://doi.org/10.1038/nmeth.3213openalex-snapshot
The I-TASSER Suite: protein structure and function prediction
inferredcites →https://doi.org/10.1073/pnas.0505425102openalex-snapshot
Conservation and relative importance of residues across protein-protein interfaces
inferredcites →https://doi.org/10.1073/pnas.051631498openalex-snapshot
Predicting crossover generation in DNA shuffling
inferredcites →https://doi.org/10.1073/pnas.92.14.6349openalex-snapshot
Periodicity of polar and nonpolar amino acids is the major determinant of secondary structure in self-assembling oligomeric peptides.
inferredcites →https://doi.org/10.1073/pnas.95.4.1460openalex-snapshot
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
inferredcites →https://doi.org/10.1093/bioinformatics/bti369openalex-snapshot
A periodicity analysis of transmembrane helices
inferredcites →https://doi.org/10.1093/bioinformatics/btl448openalex-snapshot
Anisotropic network model: systematic evaluation and a new web interface
inferredcites →https://doi.org/10.1093/bioinformatics/btm270openalex-snapshot
Predicting functionally important residues from sequence conservation
inferredcites →https://doi.org/10.1093/bioinformatics/btu847openalex-snapshot
The anisotropic network model web server at 2015 (ANM 2.0)
inferredcites →https://doi.org/10.1093/genetics/129.3.897openalex-snapshot
The selection-mutation-drift theory of synonymous codon usage.
inferredcites →https://doi.org/10.1093/molbev/msv110openalex-snapshot
Evolution ofCONSTANSRegulation and Function after Gene Duplication Produced a Photoperiodic Flowering Switch in the Brassicaceae
inferredcites →https://doi.org/10.1093/molbev/msy110openalex-snapshot
Wobbling Forth and Drifting Back: The Evolutionary History and Impact of Bacterial tRNA Modifications
inferredcites →https://doi.org/10.1093/nar/27.5.1223openalex-snapshot
Conserved domains in DNA repair proteins and evolution of repair systems
inferredcites →https://doi.org/10.1093/nar/gkh368openalex-snapshot
ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement
inferredcites →https://doi.org/10.1103/physrevlett.92.168102openalex-snapshot
Phyllotactic Patterns on Plants
inferredcites →https://doi.org/10.1107/s0907444904001982openalex-snapshot
On the potential of normal-mode analysis for solving difficult molecular-replacement problems
inferredcites →https://doi.org/10.1126/science.278.5338.609openalex-snapshot
Gene Families: The Taxonomy of Protein Paralogs and Chimeras
inferredcites →https://doi.org/10.1146/annurev.bi.64.070195.001443openalex-snapshot
THE MULTIPLICITY OF DOMAINS IN PROTEINS
inferredcites →https://doi.org/10.1186/1471-2105-11-550openalex-snapshot
Localizing triplet periodicity in DNA and cDNA sequences
inferredcites →https://doi.org/10.1186/1471-2105-9-53openalex-snapshot
TOBFAC: the database of tobacco transcription factors
inferredcites →https://doi.org/10.1186/1471-2105-9-s6-s3openalex-snapshot
Evolutionary conservation of DNA-contact residues in DNA-binding domains
inferredcites →https://doi.org/10.1186/1745-6150-3-29openalex-snapshot
The Last Universal Common Ancestor: emergence, constitution and genetic legacy of an elusive forerunner
inferredcites →https://doi.org/10.1186/s12915-017-0411-5openalex-snapshot
Biological function in the twilight zone of sequence conservation
inferredcites →https://doi.org/10.1261/rna.2760703openalex-snapshot
Mechanism of molecular interactions for tRNAVal recognition by valyl-tRNA synthetase
inferredcites →https://doi.org/10.1371/journal.pcbi.1000105openalex-snapshot
Local Function Conservation in Sequence and Structure Space
inferredcites →https://doi.org/10.1371/journal.pcbi.1000585openalex-snapshot
Predicting Protein Ligand Binding Sites by Combining Evolutionary Sequence Conservation and 3D Structure
inferredcites →https://doi.org/10.1371/journal.pone.0016147openalex-snapshot
Mutation and Selection on the Wobble Nucleotide in tRNA Anticodons in Marine Bivalve Mitochondrial Genomes
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1101/683466openalex-snapshot
Dancing Molecules: Rewiring Cooperative Communications within 14-3-3 ζ Docking Proteins
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