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Epigenome-wide meta-analysis of PTSD across 10 military and civilian cohorts identifies novel methylation loci

https://doi.org/10.1101/585109
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Genome-wide Association Studies of Posttraumatic Stress Disorder in 2 Cohorts of US Army Soldiers
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Differential immune system DNA methylation and cytokine regulation in post‐traumatic stress disorder
inferredcites →https://doi.org/10.1002/ajmg.b.32568openalex-snapshot
Epigenome‐wide association of PTSD from heterogeneous cohorts with a common multi‐site analysis pipeline
inferredcites →https://doi.org/10.1002/gepi.21789openalex-snapshot
Accounting for Population Stratification in DNA Methylation Studies
inferredcites →https://doi.org/10.1007/0-387-29362-0openalex-snapshot
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
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Genome-wide mapping and analysis of aryl hydrocarbon receptor (AHR)- and aryl hydrocarbon receptor repressor (AHRR)-binding sites in human breast cancer cells
inferredcites →https://doi.org/10.1007/s11126-009-9096-4openalex-snapshot
The Link Between Post-traumatic Stress Disorder and Physical Comorbidities: A Systematic Review
inferredcites →https://doi.org/10.1007/s11306-017-1264-1openalex-snapshot
A robust, single-injection method for targeted, broad-spectrum plasma metabolomics
inferredcites →https://doi.org/10.1007/s11920-018-0898-7openalex-snapshot
Recent Genetics and Epigenetics Approaches to PTSD
inferredcites →https://doi.org/10.1007/s12031-017-0909-xopenalex-snapshot
Single-Prolonged-Stress-Induced Changes in Autophagy-Related Proteins Beclin-1, LC3, and p62 in the Medial Prefrontal Cortex of Rats with Post-traumatic Stress Disorder
inferredcites →https://doi.org/10.1016/bs.pmbts.2018.04.001openalex-snapshot
Neuroepigenetics of Post-Traumatic Stress Disorder
inferredcites →https://doi.org/10.1016/j.bbi.2009.07.003openalex-snapshot
Substantial reduction of naïve and regulatory T cells following traumatic stress
inferredcites →https://doi.org/10.1016/j.bbr.2015.07.039openalex-snapshot
Rapastinel (GLYX-13) has therapeutic potential for the treatment of post-traumatic stress disorder: Characterization of a NMDA receptor-mediated metaplasticity process in the medial prefrontal cortex of rats
inferredcites →https://doi.org/10.1016/j.biopsych.2018.01.020openalex-snapshot
Genomic Approaches to Posttraumatic Stress Disorder: The Psychiatric Genomic Consortium Initiative
inferredcites →https://doi.org/10.1016/j.copsyc.2016.09.003openalex-snapshot
The genetics and epigenetics of PTSD: overview, recent advances, and future directions
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Aryl Hydrocarbon Receptor Controls Monocyte Differentiation into Dendritic Cells versus Macrophages
inferredcites →https://doi.org/10.1016/j.immuni.2017.12.012openalex-snapshot
Regulation of the Immune Response by the Aryl Hydrocarbon Receptor
inferredcites →https://doi.org/10.1016/j.jpsychires.2014.03.016openalex-snapshot
The effect of trauma-focused therapy on the altered T cell distribution in individuals with PTSD: Evidence from a randomized controlled trial
inferredcites →https://doi.org/10.1016/j.psychres.2010.07.042openalex-snapshot
Co-occurring mental and substance abuse disorders: A review on the potential predictors and clinical outcomes
inferredcites →https://doi.org/10.1016/j.psyneuen.2013.08.014openalex-snapshot
Genome-wide association study implicates a novel RNA gene, the lincRNA AC068718.1, as a risk factor for post-traumatic stress disorder in women
inferredcites →https://doi.org/10.1016/j.psyneuen.2015.09.020openalex-snapshot
Accelerated DNA methylation age: Associations with PTSD and neural integrity
inferredcites →https://doi.org/10.1016/j.taap.2009.07.011openalex-snapshot
Long-term exposure to nicotine markedly reduces kynurenic acid in rat brain — In vitro and ex vivo evidence
inferredcites →https://doi.org/10.1016/s2215-0366(15)00309-0openalex-snapshot
Inflammatory markers in post-traumatic stress disorder: a systematic review, meta-analysis, and meta-regression
inferredcites →https://doi.org/10.1021/ci5005459openalex-snapshot
Ligand Binding and Functional Selectivity of l -Tryptophan Metabolites at the Mouse Aryl Hydrocarbon Receptor (mAhR)
inferredcites →https://doi.org/10.1037//0022-006x.68.5.748openalex-snapshot
Meta-analysis of risk factors for posttraumatic stress disorder in trauma-exposed adults.
inferredcites →https://doi.org/10.1038/mp.2008.25openalex-snapshot
Genomewide association for schizophrenia in the CATIE study: results of stage 1
inferredcites →https://doi.org/10.1038/mp.2015.9openalex-snapshot
Gene networks specific for innate immunity define post-traumatic stress disorder
inferredcites →https://doi.org/10.1038/mp.2017.120openalex-snapshot
Longitudinal analyses of the DNA methylome in deployed military servicemen identify susceptibility loci for post-traumatic stress disorder
inferredcites →https://doi.org/10.1038/ncomms10106openalex-snapshot
DICER1 and microRNA regulation in post-traumatic stress disorder with comorbid depression
inferredcites →https://doi.org/10.1038/ncomms5757openalex-snapshot
Clozapine-induced agranulocytosis is associated with rare HLA-DQB1 and HLA-B alleles
inferredcites →https://doi.org/10.1038/npp.2015.118openalex-snapshot
The Psychiatric Genomics Consortium Posttraumatic Stress Disorder Workgroup: Posttraumatic Stress Disorder Enters the Age of Large-Scale Genomic Collaboration
inferredcites →https://doi.org/10.1038/srep31209openalex-snapshot
Dysregulated immune system networks in war veterans with PTSD is an outcome of altered miRNA expression and DNA methylation
inferredcites →https://doi.org/10.1038/tp.2017.130openalex-snapshot
An epigenome-wide DNA methylation study of PTSD and depression in World Trade Center responders
inferredcites →https://doi.org/10.1038/tpj.2012.18openalex-snapshot
Possible association of CUX1 gene polymorphisms with antidepressant response in major depressive disorder
inferredcites →https://doi.org/10.1073/pnas.0910794107openalex-snapshot
Epigenetic and immune function profiles associated with posttraumatic stress disorder
inferredcites →https://doi.org/10.1073/pnas.1217750110openalex-snapshot
Childhood maltreatment is associated with distinct genomic and epigenetic profiles in posttraumatic stress disorder
inferredcites →https://doi.org/10.1073/pnas.1607571113openalex-snapshot
Metabolic features of chronic fatigue syndrome
inferredcites →https://doi.org/10.1074/jbc.r116.767723openalex-snapshot
Control of immune-mediated pathology via the aryl hydrocarbon receptor
inferredcites →https://doi.org/10.1080/13546805.2017.1322502openalex-snapshot
Associations of NEUROD2 polymorphisms and change of cognitive dysfunctions in schizophrenia and schizoaffective disorder after eight weeks of antipsychotic treatment
inferredcites →https://doi.org/10.1093/bioinformatics/bts680openalex-snapshot
A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data
inferredcites →https://doi.org/10.1093/bioinformatics/btv560openalex-snapshot
missMethyl: an R package for analyzing data from Illumina’s HumanMethylation450 platform
inferredcites →https://doi.org/10.1093/biostatistics/kxj037openalex-snapshot
Adjusting batch effects in microarray expression data using empirical Bayes methods
inferredcites →https://doi.org/10.1093/toxsci/kfq265openalex-snapshot
An Integrated Genomic Analysis of Aryl Hydrocarbon Receptor-Mediated Inhibition of B-Cell Differentiation
inferredcites →https://doi.org/10.1096/fj.09-152611openalex-snapshot
Fine mapping of AHI1 as a schizophrenia susceptibility gene: from association to evolutionary evidence
inferredcites →https://doi.org/10.1111/j.1742-4658.2012.08551.xopenalex-snapshot
Kynurenines: from the perspective of major psychiatric disorders
inferredcites →https://doi.org/10.1111/j.2517-6161.1995.tb02031.xopenalex-snapshot
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
inferredcites →https://doi.org/10.1124/pr.114.009001openalex-snapshot
The Aryl Hydrocarbon Receptor in Barrier Organ Physiology, Immunology, and Toxicology
inferredcites →https://doi.org/10.1146/annurev.cellbio.12.1.55openalex-snapshot
AH RECEPTOR SIGNALING PATHWAYS
inferredcites →https://doi.org/10.1161/circgenetics.116.001506openalex-snapshot
Epigenetic Signatures of Cigarette Smoking
inferredcites →https://doi.org/10.1176/appi.ajp.2014.13101306openalex-snapshot
Cross-Disorder Genome-Wide Analyses Suggest a Complex Genetic Relationship Between Tourette’s Syndrome and OCD
inferredcites →https://doi.org/10.1176/appi.ajp.2017.17060693openalex-snapshot
Analysis of DNA Methylation in Young People: Limited Evidence for an Association Between Victimization Stress and Epigenetic Variation in Blood
inferredcites →https://doi.org/10.1186/1471-2105-11-587openalex-snapshot
Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
inferredcites →https://doi.org/10.1186/1471-2105-13-1openalex-snapshot
GuiTope: an application for mapping random-sequence peptides to protein sequences
inferredcites →https://doi.org/10.1186/1471-2105-13-86openalex-snapshot
DNA methylation arrays as surrogate measures of cell mixture distribution
inferredcites →https://doi.org/10.1186/1710-1492-10-43openalex-snapshot
Patients with posttraumatic stress disorder exhibit an altered phenotype of regulatory T cells
inferredcites →https://doi.org/10.1186/s12864-017-4198-0openalex-snapshot
The dynamics of smoking-related disturbed methylation: a two time-point study of methylation change in smokers, non-smokers and former smokers
inferredcites →https://doi.org/10.1196/annals.1314.011openalex-snapshot
Posttraumatic Stress Disorder and Physical Illness: Results from Clinical and Epidemiologic Studies
inferredcites →https://doi.org/10.1371/journal.pone.0041361openalex-snapshot
Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility
inferredcites →https://doi.org/10.1371/journal.pone.0094075openalex-snapshot
Dysregulation in microRNA Expression Is Associated with Alterations in Immune Functions in Combat Veterans with Post-Traumatic Stress Disorder
inferredcites →https://doi.org/10.1371/journal.pone.0167388openalex-snapshot
Genome-Wide Association of Heroin Dependence in Han Chinese
inferredcites →https://doi.org/10.1523/jneurosci.22-07-02718.2002openalex-snapshot
Gene Expression Profiling Reveals Alterations of Specific Metabolic Pathways in Schizophrenia
inferredcites →https://doi.org/10.17226/23677openalex-snapshot
Assessment of the Department of Veterans Affairs Airborne Hazards and Open Burn Pit Registry
inferredcites →https://doi.org/10.2217/epi.15.11openalex-snapshot
Traumatic Stress and Human DNA Methylation: A Critical Review
inferredcites →https://doi.org/10.3109/10408444.2015.1044601openalex-snapshot
Health effects of World Trade Center (WTC) Dust: An unprecedented disaster with inadequate risk management
inferredcites →https://doi.org/10.3389/fgene.2018.00137openalex-snapshot
Dose Response and Prediction Characteristics of a Methylation Sensitive Digital PCR Assay for Cigarette Consumption in Adults
inferredcites →https://doi.org/10.3389/fimmu.2014.00458openalex-snapshot
The Aryl Hydrocarbon Receptor Meets Immunology: Friend or Foe? A Little of Both
inferredcites →https://doi.org/10.3389/fimmu.2014.00551openalex-snapshot
Aryl Hydrocarbon Receptor and Kynurenine: Recent Advances in Autoimmune Disease Research
inferredcites →https://doi.org/10.4196/kjpp.2016.20.4.357openalex-snapshot
Effects of systemic administration of ibuprofen on stress response in a rat model of post-traumatic stress disorder
inferredcites →https://doi.org/10.7205/milmed-d-11-00299openalex-snapshot
Broad Exposure Screening of Air Pollutants in the Occupational Environment of Swedish Soldiers Deployed in Afghanistan
inferredcites →https://doi.org/10.7554/elife.14137openalex-snapshot
Cyclooxygenase-2 inhibition reduces stress-induced affective pathology

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-031-32035-4_148-1openalex-snapshot
Mental Disorders and DNA Methylation
inferred← citeshttps://doi.org/10.1007/978-3-031-73368-0_148openalex-snapshot
Mental Disorders and DNA Methylation
inferred← citeshttps://doi.org/10.1016/j.bbi.2020.10.023openalex-snapshot
PTSD is associated with increased DNA methylation across regions of HLA-DPB1 and SPATC1L
inferred← citeshttps://doi.org/10.1017/s0033291721000210openalex-snapshot
Posttraumatic stress disorder: from gene discovery to disease biology
inferred← citeshttps://doi.org/10.1021/acsptsci.4c00628openalex-snapshot
Surface Plasmon Resonance Imaging-Based Platform Enables Detection of Single, Site-Specific 5-Methylcytosine Associated with Post-traumatic Stress Disorder (PTSD)
inferred← citeshttps://doi.org/10.1038/s41398-021-01302-0openalex-snapshot
“GrimAge,” an epigenetic predictor of mortality, is accelerated in major depressive disorder
inferred← citeshttps://doi.org/10.1038/s41398-021-01608-zopenalex-snapshot
Genome-wide differentially methylated genes associated with posttraumatic stress disorder and longitudinal change in methylation in rape survivors
inferred← citeshttps://doi.org/10.1080/20008198.2019.1672948openalex-snapshot
A decennial review of psychotraumatology: what did we learn and where are we going?
inferred← citeshttps://doi.org/10.1101/2024.10.11.24315258openalex-snapshot
Mapping the epigenomic landscape of post-traumatic stress disorder in human cortical neurons
inferred← citeshttps://doi.org/10.1159/000529536openalex-snapshot
Cross-Species Convergence of Brain Transcriptomic and Epigenomic Findings in Posttraumatic Stress Disorder: A Systematic Review
inferred← citeshttps://doi.org/10.1186/s13148-019-0798-7openalex-snapshot
Longitudinal epigenome-wide association studies of three male military cohorts reveal multiple CpG sites associated with post-traumatic stress disorder
inferred← citeshttps://doi.org/10.1186/s13148-020-0820-0openalex-snapshot
An epigenome-wide association study of posttraumatic stress disorder in US veterans implicates several new DNA methylation loci
inferred← citeshttps://doi.org/10.25040/ntsh2023.01.11openalex-snapshot
POST-TRAUMATIC STRESS DISORDER: СLINICAL AND LABORATORY CHANGES AND POTENTIAL FOR IMMUNE DISORDERS
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The Molecular Biology of Susceptibility to Post-Traumatic Stress Disorder: Highlights of Epigenetics and Epigenomics
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