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Herpesvirus infection reduces Pol II occupancy of host promoters but spares viral promoters
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/wrna.1188openalex-snapshot
Virus‐encoded endonucleases: expected and novel functions
inferredcites →https://doi.org/10.1006/viro.1999.9986openalex-snapshot
The Virion Host Shutoff Function of Herpes Simplex Virus Degrades the 5′ End of a Target mRNA before the 3′ End
inferredcites →https://doi.org/10.1016/j.cell.2013.05.012openalex-snapshot
Gene Expression Is Circular: Factors for mRNA Degradation Also Foster mRNA Synthesis
inferredcites →https://doi.org/10.1016/j.cell.2015.03.027openalex-snapshot
Mammalian NET-Seq Reveals Genome-wide Nascent Transcription Coupled to RNA Processing
inferredcites →https://doi.org/10.1016/j.chom.2015.06.019openalex-snapshot
Viral Nucleases Induce an mRNA Degradation-Transcription Feedback Loop in Mammalian Cells
inferredcites →https://doi.org/10.1016/j.molcel.2010.05.004openalex-snapshot
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
inferredcites →https://doi.org/10.1016/j.molcel.2015.07.023openalex-snapshot
Tracking Distinct RNA Populations Using Efficient and Reversible Covalent Chemistry
inferredcites →https://doi.org/10.1016/j.virol.2015.02.007openalex-snapshot
Emerging roles for RNA degradation in viral replication and antiviral defense
inferredcites →https://doi.org/10.1016/s0042-6822(03)00107-7openalex-snapshot
Herpes simplex virus replication compartments can form by coalescence of smaller compartments
inferredcites →https://doi.org/10.1038/35023615openalex-snapshot
Annexation of the interchromosomal space during viral infection
inferredcites →https://doi.org/10.1038/emboj.2013.136openalex-snapshot
A DIStinctively novel exoribonuclease that really likes U
inferredcites →https://doi.org/10.1038/msb.2008.59openalex-snapshot
Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation
inferredcites →https://doi.org/10.1038/ncomms8126openalex-snapshot
Widespread disruption of host transcription termination in HSV-1 infection
inferredcites →https://doi.org/10.1038/nsmb.1680openalex-snapshot
A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein
inferredcites →https://doi.org/10.1038/nsmb1280openalex-snapshot
In vivo dynamics of RNA polymerase II transcription
inferredcites →https://doi.org/10.1073/pnas.1103411108openalex-snapshot
Herpesviral replication compartments move and coalesce at nuclear speckles to enhance export of viral late mRNA
inferredcites →https://doi.org/10.1073/pnas.82.23.8090openalex-snapshot
Cellular and viral DNA hypomethylation associated with induction of Epstein-Barr virus lytic cycle.
inferredcites →https://doi.org/10.1101/gr.130161.111openalex-snapshot
Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation
inferredcites →https://doi.org/10.1126/science.1222213openalex-snapshot
An Overlapping Protein-Coding Region in Influenza A Virus Segment 3 Modulates the Host Response
inferredcites →https://doi.org/10.1128/jvi.00930-17openalex-snapshot
Localization of Double-Strand Break Repair Proteins to Viral Replication Compartments following Lytic Reactivation of Kaposi's Sarcoma-Associated Herpesvirus
inferredcites →https://doi.org/10.1128/jvi.01019-12openalex-snapshot
Construction and Manipulation of a New Kaposi's Sarcoma-Associated Herpesvirus Bacterial Artificial Chromosome Clone
inferredcites →https://doi.org/10.1128/jvi.01230-12openalex-snapshot
A Common Strategy for Host RNA Degradation by Divergent Viruses
inferredcites →https://doi.org/10.1128/jvi.01374-13openalex-snapshot
Unconventional Sequence Requirement for Viral Late Gene Core Promoters of Murine Gammaherpesvirus 68
inferredcites →https://doi.org/10.1128/jvi.01685-13openalex-snapshot
The Open Chromatin Landscape of Kaposi's Sarcoma-Associated Herpesvirus
inferredcites →https://doi.org/10.1128/jvi.02046-13openalex-snapshot
DNA Virus Replication Compartments
inferredcites →https://doi.org/10.1128/jvi.02426-13openalex-snapshot
The D10 Decapping Enzyme of Vaccinia Virus Contributes to Decay of Cellular and Viral mRNAs and to Virulence in Mice
inferredcites →https://doi.org/10.1128/jvi.02665-15openalex-snapshot
Infection by Herpes Simplex Virus 1 Causes Near-Complete Loss of RNA Polymerase II Occupancy on the Host Cell Genome
inferredcites →https://doi.org/10.1128/jvi.03180-15openalex-snapshot
The Herpes Simplex Virus Virion Host Shutoff Protein Enhances Translation of Viral True Late mRNAs Independently of Suppressing Protein Kinase R and Stress Granule Formation
inferredcites →https://doi.org/10.1128/jvi.61.8.2368-2377.1987openalex-snapshot
Expression of a cellular gene cloned in herpes simplex virus: rabbit beta-globin is regulated as an early viral gene in infected fibroblasts
inferredcites →https://doi.org/10.1128/jvi.64.8.3882-3894.1990openalex-snapshot
Differential regulation of endogenous and transduced beta-globin genes during infection of erythroid cells with a herpes simplex virus type 1 recombinant
inferredcites →https://doi.org/10.1128/jvi.68.2.988-1001.1994openalex-snapshot
RNA polymerase II is aberrantly phosphorylated and localized to viral replication compartments following herpes simplex virus infection
inferredcites →https://doi.org/10.1128/jvi.71.3.2031-2040.1997openalex-snapshot
Repression of host RNA polymerase II transcription by herpes simplex virus type 1
inferredcites →https://doi.org/10.1128/jvi.74.15.6964-6974.2000openalex-snapshot
Cloning and Mutagenesis of the Murine Gammaherpesvirus 68 Genome as an Infectious Bacterial Artificial Chromosome
inferredcites →https://doi.org/10.1128/jvi.75.4.1798-1807.2001openalex-snapshot
Differential Regulation of the Overlapping Kaposi's Sarcoma-Associated Herpesvirus vGCR (orf74) and LANA (orf73) Promoters
inferredcites →https://doi.org/10.1128/jvi.78.3.1063-1068.2004openalex-snapshot
Herpes Simplex Virus Virion Host Shutoff Protein: Immune Evasion Mediated by a Viral RNase?
inferredcites →https://doi.org/10.1128/jvi.79.12.7396-7401.2005openalex-snapshot
The Exonuclease and Host Shutoff Functions of the SOX Protein of Kaposi's Sarcoma-Associated Herpesvirus Are Genetically Separable
inferredcites →https://doi.org/10.1128/jvi.80.2.553-561.2006openalex-snapshot
Characterization of a Vaccinia Virus Mutant with a Deletion of the D10R Gene Encoding a Putative Negative Regulator of Gene Expression
inferredcites →https://doi.org/10.1128/jvi.80.7.3567-3581.2006openalex-snapshot
ICP27 Interacts with the C-Terminal Domain of RNA Polymerase II and Facilitates Its Recruitment to Herpes Simplex Virus 1 Transcription Sites, Where It Undergoes Proteasomal Degradation during Infection
inferredcites →https://doi.org/10.1186/gb-2012-13-12-r114openalex-snapshot
Widespread promoter-mediated coordination of transcription and mRNA degradation
inferredcites →https://doi.org/10.1371/journal.pgen.1002273openalex-snapshot
Transcriptome Kinetics Is Governed by a Genome-Wide Coupling of mRNA Production and Degradation: A Role for RNA Pol II
inferredcites →https://doi.org/10.1371/journal.ppat.1000935openalex-snapshot
The Epigenetic Landscape of Latent Kaposi Sarcoma-Associated Herpesvirus Genomes
inferredcites →https://doi.org/10.1371/journal.ppat.1001013openalex-snapshot
Epigenetic Analysis of KSHV Latent and Lytic Genomes
inferredcites →https://doi.org/10.1371/journal.ppat.1002150openalex-snapshot
Global mRNA Degradation during Lytic Gammaherpesvirus Infection Contributes to Establishment of Viral Latency
inferredcites →https://doi.org/10.1371/journal.ppat.1002339openalex-snapshot
Coordinated Destruction of Cellular Messages in Translation Complexes by the Gammaherpesvirus Host Shutoff Factor and the Mammalian Exonuclease Xrn1
inferredcites →https://doi.org/10.1371/journal.ppat.1002433openalex-snapshot
SARS Coronavirus nsp1 Protein Induces Template-Dependent Endonucleolytic Cleavage of mRNAs: Viral mRNAs Are Resistant to nsp1-Induced RNA Cleavage
inferredcites →https://doi.org/10.1371/journal.ppat.1003882openalex-snapshot
Gammaherpesviral Gene Expression and Virion Composition Are Broadly Controlled by Accelerated mRNA Degradation
inferredcites →https://doi.org/10.1371/journal.ppat.1004939openalex-snapshot
Selective Recruitment of Nuclear Factors to Productively Replicating Herpes Simplex Virus Genomes
inferredcites →https://doi.org/10.1371/journal.ppat.1007070openalex-snapshot
Continuous DNA replication is required for late gene transcription and maintenance of replication compartments in gammaherpesviruses
inferredcites →https://doi.org/10.7554/elife.37663openalex-snapshot
Changes in mRNA abundance drive shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.semcdb.2020.05.010openalex-snapshot
Fated for decay: RNA elements targeted by viral endonucleases
inferred← citeshttps://doi.org/10.1080/10409238.2019.1679083openalex-snapshot
Feedback to the central dogma: cytoplasmic mRNA decay and transcription are interdependent processes
inferred← citeshttps://doi.org/10.1101/2019.12.22.886382openalex-snapshot
Alteration of the premature tRNA landscape by gammaherpesvirus infection
inferred← citeshttps://doi.org/10.1128/mbio.02664-20openalex-snapshot
Alteration of the Premature tRNA Landscape by Gammaherpesvirus Infection
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