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Moving microbes: the dynamics of transient microbial residence on human skin

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Probiotics for the Prevention and Treatment of Antibiotic-Associated Diarrhea
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Interaction frequency, network position, and the temporal persistence of interactions in a plant–pollinator network
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Short‐term direct contact with soil and plant materials leads to an immediate increase in diversity of skin microbiota
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Ecology of the Root-Nodule Bacteria of Legumes
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The Role of the Skin Microbiome in Atopic Dermatitis
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Temporal Stability of the Human Skin Microbiome
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Evidence that Human Skin Microbiome Dysbiosis Promotes Atopic Dermatitis
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Soil microbes and community coalescence
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Functions of the skin microbiota in health and disease
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Functional and phylogenetic assembly of microbial communities in the human microbiome
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Evolution of the indoor biome
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Interchange of entire communities: microbial community coalescence
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Removal of PCR inhibitors from soil DNA by chemical flocculation
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Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data
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Quantitative real-time PCR using TaqMan and SYBR Green forActinobacillus actinomycetemcomitans,Porphyromonas gingivalis,Prevotella intermedia,tetQgene and total bacteria
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Microbial Inhabitants of Humans
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Nodulation of legumes by members of the β-subclass of Proteobacteria
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Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere
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Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents
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Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils
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Structure, function and diversity of the healthy human microbiome
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Skin microbiota–host interactions
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DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/nrmicro.2017.157openalex-snapshot
The human skin microbiome
inferredcites →https://doi.org/10.1038/nrmicro2537openalex-snapshot
The skin microbiome
inferredcites →https://doi.org/10.1038/s41396-018-0082-4openalex-snapshot
Soil pH mediates the balance between stochastic and deterministic assembly of bacteria
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The National Human Activity Pattern Survey (NHAPS): a resource for assessing exposure to environmental pollutants
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Transient dynamics and persistence of ecological systems
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The influence of sex, handedness, and washing on the diversity of hand surface bacteria
inferredcites →https://doi.org/10.1073/pnas.1505204112openalex-snapshot
Dynamics of an experimental microbial invasion
inferredcites →https://doi.org/10.1073/pnas.1700688114openalex-snapshot
Cleaning up the hygiene hypothesis
inferredcites →https://doi.org/10.1080/0266476042000214501openalex-snapshot
Beta Regression for Modelling Rates and Proportions
inferredcites →https://doi.org/10.1093/bioinformatics/btq166openalex-snapshot
Picante: R tools for integrating phylogenies and ecology
inferredcites →https://doi.org/10.1093/cid/cir899openalex-snapshot
Infection Control in the Multidrug-Resistant Era: Tending the Human Microbiome
inferredcites →https://doi.org/10.1093/nar/gks1219openalex-snapshot
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
inferredcites →https://doi.org/10.1093/oso/9780198545996.001.0001openalex-snapshot
Infectious Diseases of Humans
inferredcites →https://doi.org/10.1097/aci.0b013e328364ebebopenalex-snapshot
Microbiome and skin diseases
inferredcites →https://doi.org/10.1098/rspb.2018.0789openalex-snapshot
The distribution of bacterial doubling times in the wild
inferredcites →https://doi.org/10.1099/00221287-15-3-492openalex-snapshot
Growth Rate and Generation Time of Bacteria, with Special Reference to Continuous Culture
inferredcites →https://doi.org/10.1101/282723openalex-snapshot
Cohesiveness in microbial community coalescence
inferredcites →https://doi.org/10.1101/586008openalex-snapshot
Moving microbes: the dynamics of transient microbial residence on human skin
inferredcites →https://doi.org/10.1101/gr.075549.107openalex-snapshot
A diversity profile of the human skin microbiota
inferredcites →https://doi.org/10.1101/gr.159467.113openalex-snapshot
The altered landscape of the human skin microbiome in patients with primary immunodeficiencies
inferredcites →https://doi.org/10.1111/1462-2920.13701openalex-snapshot
Integrating gut microbiota immaturity and disease‐discriminatory taxa to diagnose the initiation and severity of shrimp disease
inferredcites →https://doi.org/10.1111/apt.15001openalex-snapshot
Systematic review with meta‐analysis: the efficacy of prebiotics, probiotics, synbiotics and antibiotics in irritable bowel syndrome
inferredcites →https://doi.org/10.1111/bjd.15390openalex-snapshot
The role of the skin microbiome in atopic dermatitis: a systematic review
inferredcites →https://doi.org/10.1111/j.1365-2699.2006.01578.xopenalex-snapshot
The biogeography of naturalization in alien plants
inferredcites →https://doi.org/10.1111/nph.12923openalex-snapshot
Parsing ecological signal from noise in next generation amplicon sequencing
inferredcites →https://doi.org/10.1126/science.1171700openalex-snapshot
Topographical and Temporal Diversity of the Human Skin Microbiome
inferredcites →https://doi.org/10.1126/science.1177486openalex-snapshot
Bacterial Community Variation in Human Body Habitats Across Space and Time
inferredcites →https://doi.org/10.1126/science.1254529openalex-snapshot
Longitudinal analysis of microbial interaction between humans and the indoor environment
inferredcites →https://doi.org/10.1126/science.296.5567.490openalex-snapshot
Allergy, Parasites, and the Hygiene Hypothesis
inferredcites →https://doi.org/10.1128/aem.33.3.603-608.1977openalex-snapshot
The Environment and the Microbial Ecology of Human Skin
inferredcites →https://doi.org/10.1128/aem.71.12.8228-8235.2005openalex-snapshot
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/mbio.00782-13openalex-snapshot
Microbiome Assembly across Multiple Body Sites in Low-Birthweight Infants
inferredcites →https://doi.org/10.1128/msystems.00083-16openalex-snapshot
What Have We Learned about the Microbiomes of Indoor Environments?
inferredcites →https://doi.org/10.1136/bmj.299.6710.1259openalex-snapshot
Hay fever, hygiene, and household size.
inferredcites →https://doi.org/10.1146/annurev.ecolsys.110308.120304openalex-snapshot
The Role of Propagule Pressure in Biological Invasions
inferredcites →https://doi.org/10.1146/annurev.es.14.110183.001201openalex-snapshot
Null Models in Ecology
inferredcites →https://doi.org/10.1172/jci.insight.120608openalex-snapshot
First-in-human topical microbiome transplantation with Roseomonas mucosa for atopic dermatitis
inferredcites →https://doi.org/10.1172/jci.insight.86955openalex-snapshot
Transplantation of human skin microbiota in models of atopic dermatitis
inferredcites →https://doi.org/10.1186/2049-2618-2-7openalex-snapshot
Bacterial communities on classroom surfaces vary with human contact
inferredcites →https://doi.org/10.1186/gb-2011-12-5-r50openalex-snapshot
Moving pictures of the human microbiome
inferredcites →https://doi.org/10.1186/gb-2013-14-1-r1openalex-snapshot
Biogeography of the ecosystems of the healthy human body
inferredcites →https://doi.org/10.1186/gb-2014-15-1-r1openalex-snapshot
Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis
inferredcites →https://doi.org/10.1186/s13059-014-0531-yopenalex-snapshot
Temporal variability is a personalized feature of the human microbiome
inferredcites →https://doi.org/10.1186/s13073-016-0300-5openalex-snapshot
Alterations in fecal microbiota composition by probiotic supplementation in healthy adults: a systematic review of randomized controlled trials
inferredcites →https://doi.org/10.1186/s40168-017-0294-2openalex-snapshot
Cleanliness in context: reconciling hygiene with a modern microbial perspective
inferredcites →https://doi.org/10.1186/s40168-018-0559-4openalex-snapshot
Daylight exposure modulates bacterial communities associated with household dust
inferredcites →https://doi.org/10.12688/f1000research.8986.1openalex-snapshot
Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses
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Dissecting the null model for biological invasions: A meta-analysis of the propagule pressure effect
inferredcites →https://doi.org/10.1371/journal.pcbi.1005706openalex-snapshot
Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment
inferredcites →https://doi.org/10.1371/journal.pone.0009490openalex-snapshot
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
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ALTERNATIVES TO RESILIENCE FOR MEASURING THE RESPONSES OF ECOLOGICAL SYSTEMS TO PERTURBATIONS
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DISENTANGLING SAMPLING AND ECOLOGICAL EXPLANATIONS UNDERLYING SPECIES–AREA RELATIONSHIPS
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PHYLOGENETIC CLUSTERING AND OVERDISPERSION IN BACTERIAL COMMUNITIES
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Timescales, dynamics, and ecological understanding
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glmmTMB: Generalized Linear Mixed Models using Template Model Builder
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fmicb.2016.00772openalex-snapshot
Molecular Evidence for Metabolically Active Bacteria in the Atmosphere
inferredcites →https://doi.org/10.4161/psb.2.2.4073openalex-snapshot
Plant-Associated Methylobacteria as Co-Evolved Phytosymbionts
inferredcites →https://doi.org/10.7326/0003-4819-117-2-174_4openalex-snapshot
Infectious Diseases of Humans: Dynamics and Control
inferredcites →https://doi.org/10.7717/peerj.1258openalex-snapshot
Humans differ in their personal microbial cloud
inferredcites →https://doi.org/10.7717/peerj.2823openalex-snapshot
An extensive comparison of species-abundance distribution models
inferredcites →https://doi.org/10.7717/peerj.3454openalex-snapshot
Ecophylogeny of the endospheric root fungal microbiome of co-occurring Agrostis stolonifera
inferredcites →https://doi.org/10.7717/peerj.36openalex-snapshot
Why sauropods had long necks; and why giraffes have short necks
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Significant changes in the skin microbiome mediated by the sport of roller derby

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/ajhb.23584openalex-snapshot
Comparing different sample collection and storage methods for field‐based skin microbiome research
inferred← citeshttps://doi.org/10.1007/s00248-021-01884-8openalex-snapshot
Ecological Processes and Human Behavior Provide a Framework for Studying the Skin Microbial Metacommunity
inferred← citeshttps://doi.org/10.1007/s13370-021-00900-xopenalex-snapshot
Modelling Covid-19 mitigation and control strategies in the presence of migration and vaccination: the case of South Africa
inferred← citeshttps://doi.org/10.1016/j.endeavour.2022.100814openalex-snapshot
Living through multispecies societies: Approaching the microbiome with Imanishi Kinji
inferred← citeshttps://doi.org/10.1021/acsestengg.4c00001openalex-snapshot
Vulnerable Methanogenic Community in Microbial Electrolysis Cells Alters Electron Allocation in Response to Community Coalescence
inferred← citeshttps://doi.org/10.1073/pnas.2111261119openalex-snapshot
Top-down and bottom-up cohesiveness in microbial community coalescence
inferred← citeshttps://doi.org/10.1080/24725579.2020.1790698openalex-snapshot
Optimal sensor placement in a hospital operating room
inferred← citeshttps://doi.org/10.1093/ismeco/ycag016openalex-snapshot
The fungal pathogen Batrachochytrium dendrobatidis drives the relationship between environmental and amphibian skin microbiota
inferred← citeshttps://doi.org/10.1098/rstb.2019.0252openalex-snapshot
Community coalescence: an eco-evolutionary perspective
inferred← citeshttps://doi.org/10.1111/1462-2920.15945openalex-snapshot
Towards standardized and reproducible research in skin microbiomes
inferred← citeshttps://doi.org/10.1128/msystems.00245-20openalex-snapshot
2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission
inferred← citeshttps://doi.org/10.1128/msystems.00471-21openalex-snapshot
Introducing the Microbes and Social Equity Working Group: Considering the Microbial Components of Social, Environmental, and Health Justice
inferred← citeshttps://doi.org/10.1177/09710973251316379openalex-snapshot
Isolation of Pure Cultures of Skin Micro-organisms to Revolutionize Criminal Investigations—A Pilot Study
inferred← citeshttps://doi.org/10.14427/jipai.2019.3.48openalex-snapshot
Evolving concepts and emerging solutions to the problem of staphylococcal infection in dermatology
inferred← citeshttps://doi.org/10.33448/rsd-v11i4.27859openalex-snapshot
Impacto da COVID-19 nos moradores de condomínio residencial vertical na Região Sul, Brasil: prevenção e automedicação
inferred← citeshttps://doi.org/10.3389/fevo.2019.00276openalex-snapshot
Life Between Patches: Incorporating Microbiome Biology Alters the Predictions of Metacommunity Models
inferred← citeshttps://doi.org/10.3390/ijerph17186748openalex-snapshot
How do Rural Second Homes Affect Human Health and Well-being? Review of Potential Impacts
inferred← citeshttps://doi.org/10.3390/microorganisms8071023openalex-snapshot
Extrinsic Factors Shaping the Skin Microbiome
inferred← citeshttps://doi.org/10.37521/25203openalex-snapshot
Review of the efficacy of HEPA filtered air to control coronavirus risks in cleanrooms
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