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Why did the Tc1 -like elements of mollusks acquired the spliceosomal introns?

https://doi.org/10.1101/656579
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00018-009-8376-3openalex-snapshot
Molecular domestication of transposable elements: From detrimental parasites to useful host genes
inferredcites →https://doi.org/10.1007/s00239-018-9868-2openalex-snapshot
An Analysis of IS630/Tc1/mariner Transposons in the Genome of a Pacific Oyster, Crassostrea gigas
inferredcites →https://doi.org/10.1007/s00412-014-0464-yopenalex-snapshot
Transposons, environmental changes, and heritable induced phenotypic variability
inferredcites →https://doi.org/10.1007/s10709-006-0025-2openalex-snapshot
Assembly of the Tc1 and mariner transposition initiation complexes depends on the origins of their transposase DNA binding domains
inferredcites →https://doi.org/10.1007/s13258-015-0356-4openalex-snapshot
Identification and evolutionary history of the DD41D transposons in insects
inferredcites →https://doi.org/10.1016/0092-8674(86)90480-0openalex-snapshot
Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing
inferredcites →https://doi.org/10.1016/j.bbrc.2008.02.097openalex-snapshot
Molluscan mobile elements similar to the vertebrate Recombination-Activating Genes
inferredcites →https://doi.org/10.1016/j.tig.2017.07.011openalex-snapshot
Transposable Element Domestication As an Adaptation to Evolutionary Conflicts
inferredcites →https://doi.org/10.1016/s0092-8674(00)80436-5openalex-snapshot
Molecular Reconstruction of Sleeping Beauty, a Tc1-like Transposon from Fish, and Its Transposition in Human Cells
inferredcites →https://doi.org/10.1016/s0168-9525(99)01777-1openalex-snapshot
Resident aliens: the Tc1/ mariner superfamily of transposable elements
inferredcites →https://doi.org/10.1073/pnas.1104208108openalex-snapshot
The catalytic domain of all eukaryotic cut-and-paste transposase superfamilies
inferredcites →https://doi.org/10.1073/pnas.1605113113openalex-snapshot
Spliceosomal intronogenesis
inferredcites →https://doi.org/10.1074/jbc.m113.533216openalex-snapshot
The DDN Catalytic Motif Is Required for Metnase Functions in Non-homologous End Joining (NHEJ) Repair and Replication Restart
inferredcites →https://doi.org/10.1089/10665270050081478openalex-snapshot
A Greedy Algorithm for Aligning DNA Sequences
inferredcites →https://doi.org/10.1093/gbe/evu153openalex-snapshot
Pogo-like Transposases Have Been Repeatedly Domesticated into CENP-B-Related Proteins
inferredcites →https://doi.org/10.1093/gbe/evw213openalex-snapshot
TRT, a Vertebrate and ProtozoanTc1-Like Transposon: Current Activity and Horizontal Transfer
inferredcites →https://doi.org/10.1093/gbe/evw292openalex-snapshot
Molecular evolution of piggyBac superfamily: from selfishness to domestication
inferredcites →https://doi.org/10.1093/gbe/evx010openalex-snapshot
Causes and Consequences of Rapidly Evolving mtDNA in a Plant Lineage
inferredcites →https://doi.org/10.1093/gbe/evx211openalex-snapshot
Origin and Spread of Spliceosomal Introns: Insights from the Fungal Clade Zymoseptoria
inferredcites →https://doi.org/10.1093/genetics/159.3.1103openalex-snapshot
Expanding the Diversity of the IS630-Tc1-mariner Superfamily: Discovery of a Unique DD37E Transposon and Reclassification of the DD37D and DD39D Transposons
inferredcites →https://doi.org/10.1093/molbev/mst197openalex-snapshot
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
inferredcites →https://doi.org/10.1093/molbev/msv341openalex-snapshot
VHICA, a New Method to Discriminate between Vertical and Horizontal Transposon Transfer: Application to the Mariner Family within Drosophila
inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
inferredcites →https://doi.org/10.1093/nar/22.3.262openalex-snapshot
Target site choice of the related transposable elements Tc1 and Tc3 ofCaenorhabditis elegans
inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/nar/gkl124openalex-snapshot
ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins
inferredcites →https://doi.org/10.1093/nar/gkt292openalex-snapshot
CNA web server: rigidity theory-based thermal unfolding simulations of proteins for linking structure, (thermo-)stability, and function
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004035openalex-snapshot
maT—A Clade of Transposons Intermediate Between mariner and Tc1
inferredcites →https://doi.org/10.1098/rspb.2014.2332openalex-snapshot
A phylogenetic backbone for Bivalvia: an RNA-seq approach
inferredcites →https://doi.org/10.1099/mic.0.062901-0openalex-snapshot
Boto, a class II transposon in Moniliophthora perniciosa, is the first representative of the PIF/Harbinger superfamily in a phytopathogenic fungus
inferredcites →https://doi.org/10.1101/cshperspect.a016071openalex-snapshot
Origin of Spliceosomal Introns and Alternative Splicing
inferredcites →https://doi.org/10.1128/microbiolspec.mdna3-0033-2014openalex-snapshot
Mariner and the ITm Superfamily of Transposons
inferredcites →https://doi.org/10.1128/microbiolspec.mdna3-0042-2014openalex-snapshot
Sleeping Beauty Transposition
inferredcites →https://doi.org/10.1134/s2079059711060086openalex-snapshot
Transposable elements and plant genome evolution
inferredcites →https://doi.org/10.1134/s2079059711060141openalex-snapshot
Transposable elements: Instability of genes and genomes
inferredcites →https://doi.org/10.1146/annurev-genet-110711-155621openalex-snapshot
Transposable Elements: An Abundant and Natural Source of Regulatory Sequences for Host Genes
inferredcites →https://doi.org/10.1146/annurev.genet.40.110405.090448openalex-snapshot
DNA Transposons and the Evolution of Eukaryotic Genomes
inferredcites →https://doi.org/10.1159/000107609openalex-snapshot
Exaptation of Protein Coding Sequences from Transposable Elements
inferredcites →https://doi.org/10.1186/1471-2164-11-396openalex-snapshot
Genome size evolution in pufferfish: an insight from BAC clone-based Diodon holocanthus genome sequencing
inferredcites →https://doi.org/10.1186/1745-6150-7-11openalex-snapshot
Origin and evolution of spliceosomal introns
inferredcites →https://doi.org/10.1186/1759-8753-4-23openalex-snapshot
PGBD5: a neural-specific intron-containing piggyBac transposase domesticated over 500 million years ago and conserved from cephalochordates to humans
inferredcites →https://doi.org/10.1186/1759-8753-5-4openalex-snapshot
Horizontal transfer of transposons between and within crustaceans and insects
inferredcites →https://doi.org/10.1186/s12864-018-4714-xopenalex-snapshot
Mobilization of retrotransposons as a cause of chromosomal diversification and rapid speciation: the case for the Antarctic teleost genus Trematomus
inferredcites →https://doi.org/10.1186/s12866-014-0256-9openalex-snapshot
Analysis of Tc1-Mariner elements in Sclerotinia sclerotiorum suggests recent activity and flexible transposases
inferredcites →https://doi.org/10.1186/s13059-018-1577-zopenalex-snapshot
Ten things you should know about transposable elements
inferredcites →https://doi.org/10.1266/ggs.18-00024openalex-snapshot
Structural and sequence diversity of eukaryotic transposable elements
inferredcites →https://doi.org/10.1371/journal.pbio.0030181openalex-snapshot
RAG1 Core and V(D)J Recombination Signal Sequences Were Derived from Transib Transposons
inferredcites →https://doi.org/10.1371/journal.pgen.1002384openalex-snapshot
Repetitive Elements May Comprise Over Two-Thirds of the Human Genome
inferredcites →https://doi.org/10.1371/journal.pone.0129302openalex-snapshot
Novel Introner-Like Elements in fungi Are Involved in Parallel Gains of Spliceosomal Introns
inferredcites →https://doi.org/10.14284/170openalex-snapshot
World Register of Marine Species
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