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The SiaABC threonine phosphorylation pathway controls biofilm formation in response to carbon availability in Pseudomonas aeruginosa

https://doi.org/10.1101/674879
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inferredcites →https://doi.org/10.1002/j.1460-2075.1996.tb01071.xopenalex-snapshot
Crystal structure of the protein serine/threonine phosphatase 2C at 2.0 A resolution.
inferredcites →https://doi.org/10.1002/pmic.200800655openalex-snapshot
Ser/Thr/Tyr phosphoproteome analysis of pathogenic and non‐pathogenic Pseudomonas species
inferredcites →https://doi.org/10.1002/ppul.21011openalex-snapshot
Pseudomonas aeruginosa biofilms in the respiratory tract of cystic fibrosis patients
inferredcites →https://doi.org/10.1006/bbrc.1996.0374openalex-snapshot
Inhibition of Protein Serine/Threonine Phosphatases by Fumonisin B1, a Mycotoxin
inferredcites →https://doi.org/10.1007/s00203-006-0111-yopenalex-snapshot
Cell aggregation of Pseudomonas aeruginosa strain PAO1 as an energy-dependent stress response during growth with sodium dodecyl sulfate
inferredcites →https://doi.org/10.1007/s00253-009-2245-8openalex-snapshot
The Escherichia coli rhamnose promoter rhaP BAD is in Pseudomonas putida KT2440 independent of Crp–cAMP activation
inferredcites →https://doi.org/10.1007/s00253-015-6726-7openalex-snapshot
Cells of Escherichia coli are protected against severe chemical stress by co-habiting cell aggregates formed by Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1016/0263-7855(96)00018-5openalex-snapshot
VMD: Visual molecular dynamics
inferredcites →https://doi.org/10.1016/0304-4165(65)90403-4openalex-snapshot
Use of coomassie brilliant blue R250 for the electrophoresis of microgram quantities of parotid saliva proteins on acrylamide-gel strips
inferredcites →https://doi.org/10.1016/0378-1119(95)00584-1openalex-snapshot
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
inferredcites →https://doi.org/10.1016/j.addr.2014.11.017openalex-snapshot
Antimicrobial resistance, respiratory tract infections and role of biofilms in lung infections in cystic fibrosis patients
inferredcites →https://doi.org/10.1016/j.chom.2018.11.008openalex-snapshot
A Surface-Induced Asymmetric Program Promotes Tissue Colonization by Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1016/j.ijantimicag.2009.12.011openalex-snapshot
Antibiotic resistance of bacterial biofilms
inferredcites →https://doi.org/10.1016/j.jhin.2009.04.020openalex-snapshot
Pseudomonas aeruginosa: a formidable and ever-present adversary
inferredcites →https://doi.org/10.1016/j.jsb.2010.06.008openalex-snapshot
High-throughput production of human proteins for crystallization: The SGC experience
inferredcites →https://doi.org/10.1016/j.mib.2009.01.007openalex-snapshot
Bacterial nucleotide-based second messengers
inferredcites →https://doi.org/10.1016/j.mib.2011.11.009openalex-snapshot
Histidine kinases and response regulators in networks
inferredcites →https://doi.org/10.1016/j.mib.2015.01.005openalex-snapshot
Ser/Thr phosphorylation as a regulatory mechanism in bacteria
inferredcites →https://doi.org/10.1016/j.resmic.2008.02.002openalex-snapshot
Pseudomonas aeruginosa, under DNA replication inhibition, tends to form biofilms via Arr
inferredcites →https://doi.org/10.1016/j.tim.2014.04.004openalex-snapshot
Chemosensory signaling systems that control bacterial survival
inferredcites →https://doi.org/10.1016/s0065-2911(02)46005-5openalex-snapshot
The physiology and collective recalcitrance of microbial biofilm communities
inferredcites →https://doi.org/10.1021/bi4005649openalex-snapshot
Binding of a Third Metal Ion by the Human Phosphatases PP2Cα and Wip1 Is Required for Phosphatase Activity
inferredcites →https://doi.org/10.1038/227680a0openalex-snapshot
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4
inferredcites →https://doi.org/10.1038/ismej.2013.229openalex-snapshot
Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation
inferredcites →https://doi.org/10.1038/ismej.2013.232openalex-snapshot
Metabolite transfer with the fermentation product 2,3-butanediol enhances virulence by Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1038/ismej.2016.76openalex-snapshot
The fermentation product 2,3-butanediol alters P. aeruginosa clearance, cytokine response and the lung microbiome
inferredcites →https://doi.org/10.1038/nature02122openalex-snapshot
A genetic basis for Pseudomonas aeruginosa biofilm antibiotic resistance
inferredcites →https://doi.org/10.1038/nature03912openalex-snapshot
Aminoglycoside antibiotics induce bacterial biofilm formation
inferredcites →https://doi.org/10.1038/nature12947openalex-snapshot
Sulphoglycolysis in Escherichia coli K-12 closes a gap in the biogeochemical sulphur cycle
inferredcites →https://doi.org/10.1038/nbt1183-784openalex-snapshot
A Broad Host Range Mobilization System for In Vivo Genetic Engineering: Transposon Mutagenesis in Gram Negative Bacteria
inferredcites →https://doi.org/10.1038/ncb1605openalex-snapshot
Threonine phosphorylation post-translationally regulates protein secretion in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1038/nrmicro.2016.89openalex-snapshot
Quorum sensing signal–response systems in Gram-negative bacteria
inferredcites →https://doi.org/10.1038/nrmicro.2016.94openalex-snapshot
Biofilms: an emergent form of bacterial life
inferredcites →https://doi.org/10.1038/nrmicro2415openalex-snapshot
The biofilm matrix
inferredcites →https://doi.org/10.1038/nrmicro2505openalex-snapshot
Signal processing in complex chemotaxis pathways
inferredcites →https://doi.org/10.1038/nrmicro2695openalex-snapshot
Should we stay or should we go: mechanisms and ecological consequences for biofilm dispersal
inferredcites →https://doi.org/10.1038/nrmicro821openalex-snapshot
Bacterial biofilms: from the Natural environment to infectious diseases
inferredcites →https://doi.org/10.1038/s41579-019-0158-9openalex-snapshot
Bacteria and archaea on Earth and their abundance in biofilms
inferredcites →https://doi.org/10.1038/s41598-018-34741-9openalex-snapshot
The development of a new parameter for tracking post-transcriptional regulation allows the detailed map of the Pseudomonas aeruginosa Crc regulon
inferredcites →https://doi.org/10.1038/srep10052openalex-snapshot
C-di-GMP regulates Pseudomonas aeruginosa stress response to tellurite during both planktonic and biofilm modes of growth
inferredcites →https://doi.org/10.1046/j.1462-2920.2002.00321.xopenalex-snapshot
Pseudomonas aeruginosa displays an epidemic population structure
inferredcites →https://doi.org/10.1073/pnas.1120087109openalex-snapshot
Structure of components of an intercellular channel complex in sporulating Bacillus subtilis
inferredcites →https://doi.org/10.1073/pnas.2036282100openalex-snapshot
Comprehensive transposon mutant library of Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1074/jbc.ra117.001213openalex-snapshot
A trapped human PPM1A–phosphopeptide complex reveals structural features critical for regulation of PPM protein phosphatase activity
inferredcites →https://doi.org/10.1079/pns2006499openalex-snapshot
Hyperglycaemia and pulmonary infection
inferredcites →https://doi.org/10.1080/08927014.2012.757308openalex-snapshot
Plumbing of hospital premises is a reservoir for opportunistically pathogenic microorganisms: a review
inferredcites →https://doi.org/10.1093/bioinformatics/btu097openalex-snapshot
ZDOCK server: interactive docking prediction of protein–protein complexes and symmetric multimers
inferredcites →https://doi.org/10.1093/nar/gky324openalex-snapshot
Genome-wide mapping of the RNA targets of the Pseudomonas aeruginosa riboregulatory protein RsmN
inferredcites →https://doi.org/10.1101/674879openalex-snapshot
The SiaABC threonine phosphorylation pathway controls biofilm formation in response to carbon availability in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1107/s0907444909052925openalex-snapshot
PHENIX : a comprehensive Python-based system for macromolecular structure solution
inferredcites →https://doi.org/10.1107/s0907444911056058openalex-snapshot
Exploiting structure similarity in refinement: automated NCS and target-structure restraints inBUSTER
inferredcites →https://doi.org/10.1111/1462-2920.14332openalex-snapshot
2,3‐Butanediol catabolism in Pseudomonas aeruginosa PAO1
inferredcites →https://doi.org/10.1111/1462-2920.14624openalex-snapshot
A partner‐switching system controls activation of mixed‐linkage β‐glucan synthesis by c‐di‐GMP in Sinorhizobium meliloti
inferredcites →https://doi.org/10.1111/1574-6968.12132openalex-snapshot
Rapid monitoring of Pseudomonas aeruginosa in hospital water systems: a key priority in prevention of nosocomial infection
inferredcites →https://doi.org/10.1111/apm.12099openalex-snapshot
The role of bacterial biofilms in chronic infections
inferredcites →https://doi.org/10.1111/j.1365-2958.2007.06042.xopenalex-snapshot
Gac/Rsm signal transduction pathway of γ‐proteobacteria: from RNA recognition to regulation of social behaviour
inferredcites →https://doi.org/10.1111/j.1365-2958.2009.06670.xopenalex-snapshot
Determination of the regulon and identification of novel mRNA targets of Pseudomonas aeruginosa RsmA
inferredcites →https://doi.org/10.1111/j.1462-2920.2005.00780.xopenalex-snapshot
Worldwide distribution of Pseudomonas aeruginosa clone C strains in the aquatic environment and cystic fibrosis patients
inferredcites →https://doi.org/10.1111/j.1462-2920.2007.01339.xopenalex-snapshot
Detergent‐induced cell aggregation in subpopulations of Pseudomonas aeruginosa as a preadaptive survival strategy
inferredcites →https://doi.org/10.1111/j.1462-2920.2009.02012.xopenalex-snapshot
SiaA and SiaD are essential for inducing autoaggregation as a specific response to detergent stress in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1111/j.1462-2920.2011.02495.xopenalex-snapshot
Key two‐component regulatory systems that control biofilm formation in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1126/science.1072047openalex-snapshot
Recent Segmental Duplications in the Human Genome
inferredcites →https://doi.org/10.1126/science.1128393openalex-snapshot
A Virulence Locus of Pseudomonas aeruginosa Encodes a Protein Secretion Apparatus
inferredcites →https://doi.org/10.1126/science.284.5418.1318openalex-snapshot
Bacterial Biofilms: A Common Cause of Persistent Infections
inferredcites →https://doi.org/10.1128/aac.00194-15openalex-snapshot
In Vivo Efficacy of Antimicrobials against Biofilm-Producing Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/aem.66.5.1911-1916.2000openalex-snapshot
An α-Proteobacterium Converts Linear Alkylbenzenesulfonate Surfactants into Sulfophenylcarboxylates and Linear Alkyldiphenyletherdisulfonate Surfactants into Sulfodiphenylethercarboxylates
inferredcites →https://doi.org/10.1128/cmr.00036-10openalex-snapshot
Clinical Significance of Microbial Infection and Adaptation in Cystic Fibrosis
inferredcites →https://doi.org/10.1128/cmr.19.2.403-434.2006openalex-snapshot
Burn Wound Infections
inferredcites →https://doi.org/10.1128/iai.00586-07openalex-snapshot
Pseudomonas aeruginosa forms biofilms in acute infection independent of cell-to-cell signaling.
inferredcites →https://doi.org/10.1128/iai.67.10.5386-5394.1999openalex-snapshot
Functional Characterization of a Serine/Threonine Protein Kinase of Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/jb.00539-15openalex-snapshot
FleQ DNA Binding Consensus Sequence Revealed by Studies of FleQ-Dependent Regulation of Biofilm Gene Expression in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/jb.00779-06openalex-snapshot
Involvement of Nitric Oxide in Biofilm Dispersal of Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/jb.139.1.137-140.1979openalex-snapshot
Transduction of Pseudomonas aeruginosa with a mutant of bacteriophage E79
inferredcites →https://doi.org/10.1128/jb.184.23.6481-6489.2002openalex-snapshot
Autolysis and Autoaggregation in Pseudomonas aeruginosa Colony Morphology Mutants
inferredcites →https://doi.org/10.1128/jcm.00501-08openalex-snapshot
Distribution, Organization, and Ecology of Bacteria in Chronic Wounds
inferredcites →https://doi.org/10.1128/mbio.00237-16openalex-snapshot
Role of Multicellular Aggregates in Biofilm Formation
inferredcites →https://doi.org/10.1128/mbio.00944-13openalex-snapshot
Aerial Exposure to the Bacterial Volatile Compound Trimethylamine Modifies Antibiotic Resistance of Physically Separated Bacteria by Raising Culture Medium pH
inferredcites →https://doi.org/10.1128/mmbr.00013-14openalex-snapshot
Biofilm-Related Infections: Bridging the Gap between Clinical Management and Fundamental Aspects of Recalcitrance toward Antibiotics
inferredcites →https://doi.org/10.1128/mmbr.00041-08openalex-snapshot
Signals, Regulatory Networks, and Materials That Build and Break Bacterial Biofilms
inferredcites →https://doi.org/10.1128/mmbr.00042-10openalex-snapshot
Eukaryote-Like Serine/Threonine Kinases and Phosphatases in Bacteria
inferredcites →https://doi.org/10.1128/mmbr.00043-12openalex-snapshot
Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger
inferredcites →https://doi.org/10.1128/mmbr.00052-14openalex-snapshot
Regulation of Bacterial Virulence by Csr (Rsm) Systems
inferredcites →https://doi.org/10.1128/mmbr.05007-11openalex-snapshot
The Multiple Signaling Systems Regulating Virulence in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1128/mmbr.60.3.539-574.1996openalex-snapshot
Microbial pathogenesis in cystic fibrosis: mucoid Pseudomonas aeruginosa and Burkholderia cepacia
inferredcites →https://doi.org/10.1128/mmbr.64.4.847-867.2000openalex-snapshot
Microbial Biofilms: from Ecology to Molecular Genetics
inferredcites →https://doi.org/10.1146/annurev-micro-020415-111342openalex-snapshot
Protein Phosphatases of Pathogenic Bacteria: Role in Physiology and Virulence
inferredcites →https://doi.org/10.1146/annurev-micro-092412-155635openalex-snapshot
Acyl-Homoserine Lactone Quorum Sensing: From Evolution to Application
inferredcites →https://doi.org/10.1146/annurev.biochem.69.1.183openalex-snapshot
Two-Component Signal Transduction
inferredcites →https://doi.org/10.1146/annurev.mi.49.100195.003431openalex-snapshot
MICROBIAL BIOFILMS
inferredcites →https://doi.org/10.1146/annurev.micro.56.012302.160705openalex-snapshot
Biofilms as Complex Differentiated Communities
inferredcites →https://doi.org/10.1146/annurev.micro.57.030502.090720openalex-snapshot
Bacterial Biofilms: An Emerging Link to Disease Pathogenesis
inferredcites →https://doi.org/10.1159/000331224openalex-snapshot
Pseudomonas aeruginosa and Mortality after Hospital Admission for Chronic Obstructive Pulmonary Disease
inferredcites →https://doi.org/10.1164/rccm.201312-2142ocopenalex-snapshot
Conditions Associated with the Cystic Fibrosis Defect Promote Chronic Pseudomonas aeruginosa Infection
inferredcites →https://doi.org/10.1172/jci200213870openalex-snapshot
Effects of reduced mucus oxygen concentration in airway Pseudomonas infections of cystic fibrosis patients
inferredcites →https://doi.org/10.1183/09031936.06.00085105openalex-snapshot
Volatile organic compounds in the exhaled breath of young patients with cystic fibrosis
inferredcites →https://doi.org/10.1289/ehp.01109s2283openalex-snapshot
Sphingolipid metabolism: roles in signal transduction and disruption by fumonisins.
inferredcites →https://doi.org/10.1371/journal.pgen.1006354openalex-snapshot
The Diguanylate Cyclase HsbD Intersects with the HptB Regulatory Cascade to Control Pseudomonas aeruginosa Biofilm and Motility
inferredcites →https://doi.org/10.1371/journal.pone.0005513openalex-snapshot
Pseudomonas aeruginosa PAO1 Preferentially Grows as Aggregates in Liquid Batch Cultures and Disperses upon Starvation
inferredcites →https://doi.org/10.1371/journal.pone.0007740openalex-snapshot
Pseudomonas aeruginosa Population Structure Revisited
inferredcites →https://doi.org/10.1371/journal.pone.0027943openalex-snapshot
Phenotypes of Non-Attached Pseudomonas aeruginosa Aggregates Resemble Surface Attached Biofilm
inferredcites →https://doi.org/10.1371/journal.pone.0056905openalex-snapshot
A Proteomic View at the Biochemistry of Syntrophic Butyrate Oxidation in Syntrophomonas wolfei
inferredcites →https://doi.org/10.1371/journal.pone.0149683openalex-snapshot
Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates
inferredcites →https://doi.org/10.1371/journal.ppat.1000804openalex-snapshot
YfiBNR Mediates Cyclic di-GMP Dependent Small Colony Variant Formation and Persistence in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1371/journal.ppat.1003889openalex-snapshot
Detection of Host-Derived Sphingosine by Pseudomonas aeruginosa Is Important for Survival in the Murine Lung
inferredcites →https://doi.org/10.1371/journal.ppat.1003984openalex-snapshot
ChIP-Seq and RNA-Seq Reveal an AmrZ-Mediated Mechanism for Cyclic di-GMP Synthesis and Biofilm Development by Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1371/journal.ppat.1004480openalex-snapshot
Candida albicans Ethanol Stimulates Pseudomonas aeruginosa WspR-Controlled Biofilm Formation as Part of a Cyclic Relationship Involving Phenazines
inferredcites →https://doi.org/10.1371/journal.ppat.1005846openalex-snapshot
Evidence and Role for Bacterial Mucin Degradation in Cystic Fibrosis Airway Disease
inferredcites →https://doi.org/10.1371/journal.ppat.1006842openalex-snapshot
Pseudomonas aeruginosa rugose small-colony variants evade host clearance, are hyper-inflammatory, and persist in multiple host environments
inferredcites →https://doi.org/10.15252/embj.2019103412openalex-snapshot
The SiaA/B/C/D signaling network regulates biofilm formation in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.3389/fcimb.2017.00039openalex-snapshot
Pseudomonas aeruginosa Lifestyle: A Paradigm for Adaptation, Survival, and Persistence
inferredcites →https://doi.org/10.3389/fmicb.2016.00179openalex-snapshot
SiaA/D Interconnects c-di-GMP and RsmA Signaling to Coordinate Cellular Aggregation of Pseudomonas aeruginosa in Response to Environmental Conditions
inferredcites →https://doi.org/10.3389/fmicb.2018.02792openalex-snapshot
Anaerobic Degradation of the Plant Sugar Sulfoquinovose Concomitant With H2S Production: Escherichia coli K-12 and Desulfovibrio sp. Strain DF1 as Co-culture Model
inferredcites →https://doi.org/10.7554/elife.26111openalex-snapshot
A widespread family of serine/threonine protein phosphatases shares a common regulatory switch with proteasomal proteases
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