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Higher stochasticity of microbiota composition in seedlings of domesticated wheat compared to wild wheat
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/ece3.953openalex-snapshot
Vertical transmission of fungal endophytes is widespread in forbs
inferredcites →https://doi.org/10.1007/978-3-319-99076-7openalex-snapshot
Sustainable Agriculture Reviews 33
inferredcites →https://doi.org/10.1007/s10722-010-9581-5openalex-snapshot
Geographic distribution and domestication of wild emmer wheat (Triticum dicoccoides)
inferredcites →https://doi.org/10.1007/s11104-016-3113-9openalex-snapshot
The Cucurbita pepo seed microbiome: genotype-specific composition and implications for breeding
inferredcites →https://doi.org/10.1007/s11104-017-3451-2openalex-snapshot
Assembly of seed-associated microbial communities within and across successive plant generations
inferredcites →https://doi.org/10.1007/s13213-012-0446-3openalex-snapshot
Investigation on diversity and population succession dynamics of endophytic bacteria from seeds of maize (Zea mays L., Nongda108) at different growth stages
inferredcites →https://doi.org/10.1016/j.cell.2016.02.028openalex-snapshot
Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent
inferredcites →https://doi.org/10.1016/j.chom.2015.01.011openalex-snapshot
Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley
inferredcites →https://doi.org/10.1016/j.mimet.2003.08.009openalex-snapshot
Review and re-analysis of domain-specific 16S primers
inferredcites →https://doi.org/10.1016/j.tig.2006.01.004openalex-snapshot
The accumulation of deleterious mutations in rice genomes: a hypothesis on the cost of domestication
inferredcites →https://doi.org/10.1016/j.tig.2017.07.003openalex-snapshot
Transposable Elements Direct The Coevolution between Plants and Microbes
inferredcites →https://doi.org/10.1016/j.tplants.2017.08.005openalex-snapshot
Epichloë Fungal Endophytes and Plant Defenses: Not Just Alkaloids
inferredcites →https://doi.org/10.1038/nature22009openalex-snapshot
Plant signalling in symbiosis and immunity
inferredcites →https://doi.org/10.1038/ni1410openalex-snapshot
Plant NBS-LRR proteins in pathogen sensing and host defense
inferredcites →https://doi.org/10.1038/nmeth.2658openalex-snapshot
Differential abundance analysis for microbial marker-gene surveys
inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot
DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/nplants.2015.224openalex-snapshot
Epichloë grass endophytes in sustainable agriculture
inferredcites →https://doi.org/10.1038/nrg817openalex-snapshot
Genetics and geography of wild cereal domestication in the near east
inferredcites →https://doi.org/10.1038/s41588-019-0382-2openalex-snapshot
Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome
inferredcites →https://doi.org/10.1038/s41588-019-0393-zopenalex-snapshot
Tracing the ancestry of modern bread wheats
inferredcites →https://doi.org/10.1038/srep25581openalex-snapshot
Wheat seed embryo excision enables the creation of axenic seedlings and Koch’s postulates testing of putative bacterial endophytes
inferredcites →https://doi.org/10.1093/femsec/fiw152openalex-snapshot
Diversity of fungal endophytes in recent and ancient wheat ancestorsTriticum dicoccoidesandAegilops sharonensis
inferredcites →https://doi.org/10.1093/molbev/msm077openalex-snapshot
Grinding up Wheat: A Massive Loss of Nucleotide Diversity Since Domestication
inferredcites →https://doi.org/10.1093/molbev/mst041openalex-snapshot
Coevolution and Life Cycle Specialization of Plant Cell Wall Degrading Enzymes in a Hemibiotrophic Pathogen
inferredcites →https://doi.org/10.1093/nar/gky1022openalex-snapshot
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
inferredcites →https://doi.org/10.1101/050005openalex-snapshot
New insights in host-associated microbial diversity with broad and accurate taxonomic resolution
inferredcites →https://doi.org/10.1101/299537openalex-snapshot
ampvis2: an R package to analyse and visualise 16S rRNA amplicon data
inferredcites →https://doi.org/10.1111/1462-2920.12977openalex-snapshot
Terroir is a key driver of seed‐associated microbial assemblages
inferredcites →https://doi.org/10.1111/1755-0998.12065openalex-snapshot
ITS 1 versus ITS 2 as DNA metabarcodes for fungi
inferredcites →https://doi.org/10.1111/1758-2229.12181openalex-snapshot
Bacterial seed endophytes: genera, vertical transmission and interaction with plants
inferredcites →https://doi.org/10.1111/j.1438-8677.2012.00711.xopenalex-snapshot
Changes in the population of seed bacteria of transgenerationally Cd ‐exposed A rabidopsis thaliana
inferredcites →https://doi.org/10.1111/j.1541-0420.2011.01616.xopenalex-snapshot
ggplot2: Elegant Graphics for Data Analysis by WICKHAM, H.
inferredcites →https://doi.org/10.1111/nph.14323openalex-snapshot
Plant domestication and the assembly of bacterial and fungal communities associated with strains of the common sunflower, Helianthus annuus
inferredcites →https://doi.org/10.1126/science.1250092openalex-snapshot
Ancient hybridizations among the ancestral genomes of bread wheat
inferredcites →https://doi.org/10.1126/science.1251788openalex-snapshot
A chromosome-based draft sequence of the hexaploid bread wheat ( Triticum aestivum ) genome
inferredcites →https://doi.org/10.1126/science.aan0032openalex-snapshot
Wild emmer genome architecture and diversity elucidate wheat evolution and domestication
inferredcites →https://doi.org/10.1128/aem.03006-05openalex-snapshot
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
inferredcites →https://doi.org/10.1128/aem.03722-14openalex-snapshot
Emergence Shapes the Structure of the Seed Microbiota
inferredcites →https://doi.org/10.1146/annurev-arplant-043014-114623openalex-snapshot
Fungal Effectors and Plant Susceptibility
inferredcites →https://doi.org/10.1146/annurev-phyto-080516-035623openalex-snapshot
Interplay Between Innate Immunity and the Plant Microbiota
inferredcites →https://doi.org/10.1186/s13059-017-1346-4openalex-snapshot
The interplay of demography and selection during maize domestication and expansion
inferredcites →https://doi.org/10.1186/s40168-018-0470-zopenalex-snapshot
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin
inferredcites →https://doi.org/10.12688/f1000research.15704.1openalex-snapshot
ITSxpress: Software to rapidly trim internally transcribed spacer sequences with quality scores for marker gene analysis
inferredcites →https://doi.org/10.1371/journal.pone.0007884openalex-snapshot
Wheat Domestication Accelerated Evolution and Triggered Positive Selection in the β-Xylosidase Enzyme of Mycosphaerella graminicola
inferredcites →https://doi.org/10.1371/journal.pone.0030438openalex-snapshot
Dynamics of Seed-Borne Rice Endophytes on Early Plant Growth Stages
inferredcites →https://doi.org/10.1371/journal.pone.0061217openalex-snapshot
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
inferredcites →https://doi.org/10.32614/cran.package.pmcmropenalex-snapshot
PMCMR: Calculate Pairwise Multiple Comparisons of Mean Rank Sums
inferredcites →https://doi.org/10.3389/fmicb.2014.00415openalex-snapshot
Differences between the rhizosphere microbiome of Beta vulgaris ssp. maritima—ancestor of all beet crops—and modern sugar beets
inferredcites →https://doi.org/10.3389/fpls.2014.00492openalex-snapshot
A Vavilovian approach to discovering crop-associated microbes with potential to enhance plant immunity
inferredcites →https://doi.org/10.3389/fpls.2017.01005openalex-snapshot
Dominant Groups of Potentially Active Bacteria Shared by Barley Seeds become Less Abundant in Root Associated Microbiome
inferredcites →https://doi.org/10.7287/peerj.preprints.27295v1openalex-snapshot
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.syapm.2020.126106openalex-snapshot
Plant microbiota modified by plant domestication
inferred← citeshttps://doi.org/10.1094/pbiomes-01-20-0001-scopenalex-snapshot
Ecological Assembly Processes of the Bacterial and Fungal Microbiota of Wild and Domesticated Wheat Species
inferred← citeshttps://doi.org/10.1111/1462-2920.15107openalex-snapshot
Significant host‐ and environment‐dependent differentiation among highly sporadic fungal endophyte communities in cereal crops‐related wild grasses
inferred← citeshttps://doi.org/10.1111/pce.14508openalex-snapshot
Wheat genome architecture influences interactions with phytobeneficial microbial functional groups in the rhizosphere
inferred← citeshttps://doi.org/10.1128/mbio.03333-22openalex-snapshot
Weevil Carbohydrate Intake Triggers Endosymbiont Proliferation: A Trade-Off between Host Benefit and Endosymbiont Burden
inferred← citeshttps://doi.org/10.1186/s12862-022-02029-2openalex-snapshot
On the effect of inheritance of microbes in commensal microbiomes
inferred← citeshttps://doi.org/10.21203/rs.3.rs-20588/v1openalex-snapshot
Wheat domestication has dramatically affected the root-associated microbiome
inferred← citeshttps://doi.org/10.3390/ijms232315248openalex-snapshot
Wild Wheat Rhizosphere-Associated Plant Growth-Promoting Bacteria Exudates: Effect on Root Development in Modern Wheat and Composition
inferred← citeshttps://doi.org/10.70675/fd70cbe5za86bz422dz9373z8070f858ba1fopenalex-snapshot
Conception d’itinéraires culturaux innovants valorisant les ressources microbiennes du sol pour optimiser durablement le rendement de la culture de la tomate
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