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The Aging Microenvironment Shapes Alveolar Macrophage Identity in Aging

https://doi.org/10.1101/717033
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Long-Term Cognitive Impairment after Hospitalization for Community-Acquired Pneumonia: a Prospective Cohort Study
inferredcites →https://doi.org/10.1016/j.cell.2014.11.018openalex-snapshot
Tissue-Resident Macrophage Enhancer Landscapes Are Shaped by the Local Microenvironment
inferredcites →https://doi.org/10.1016/j.cell.2014.11.023openalex-snapshot
Environment Drives Selection and Function of Enhancers Controlling Tissue-Specific Macrophage Identities
inferredcites →https://doi.org/10.1016/j.cell.2018.09.042openalex-snapshot
Induction of Autonomous Memory Alveolar Macrophages Requires T Cell Help and Is Critical to Trained Immunity
inferredcites →https://doi.org/10.1016/j.celrep.2014.09.032openalex-snapshot
Nonclassical Ly6C− Monocytes Drive the Development of Inflammatory Arthritis in Mice
inferredcites →https://doi.org/10.1016/j.chom.2012.06.006openalex-snapshot
Candida albicans Infection Affords Protection against Reinfection via Functional Reprogramming of Monocytes
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Metformin Targets Mitochondrial Electron Transport to Reduce Air-Pollution-Induced Thrombosis
inferredcites →https://doi.org/10.1016/j.immuni.2012.12.001openalex-snapshot
Fate Mapping Reveals Origins and Dynamics of Monocytes and Tissue Macrophages under Homeostasis
inferredcites →https://doi.org/10.1016/j.immuni.2013.04.004openalex-snapshot
Tissue-Resident Macrophages Self-Maintain Locally throughout Adult Life with Minimal Contribution from Circulating Monocytes
inferredcites →https://doi.org/10.1016/j.immuni.2016.02.017openalex-snapshot
Yolk Sac Macrophages, Fetal Liver, and Adult Monocytes Can Colonize an Empty Niche and Develop into Functional Tissue-Resident Macrophages
inferredcites →https://doi.org/10.1016/j.jim.2010.03.013openalex-snapshot
Development and characterization of a lung-protective method of bone marrow transplantation in the mouse
inferredcites →https://doi.org/10.1016/j.trsl.2018.08.001openalex-snapshot
DNA methylation as a transcriptional regulator of the immune system
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Acute kidney injury in non-severe pneumonia is associated with an increased immune response and lower survival
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Clearance of p16Ink4a-positive senescent cells delays ageing-associated disorders
inferredcites →https://doi.org/10.1038/nature13989openalex-snapshot
Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors
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Metformin improves healthspan and lifespan in mice
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The transcription factor ATF7 mediates lipopolysaccharide-induced epigenetic changes in macrophages involved in innate immunological memory
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Local clearance of senescent cells attenuates the development of post-traumatic osteoarthritis and creates a pro-regenerative environment
inferredcites →https://doi.org/10.1038/nri.2017.42openalex-snapshot
Does niche competition determine the origin of tissue-resident macrophages?
inferredcites →https://doi.org/10.1038/nri3600openalex-snapshot
Alveolar macrophages: plasticity in a tissue-specific context
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Mitochondrial complex III is essential for suppressive function of regulatory T cells
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One-Year Outcomes in Survivors of the Acute Respiratory Distress Syndrome
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Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults
inferredcites →https://doi.org/10.1074/jbc.ra118.003589openalex-snapshot
DNA methylation regulates the neonatal CD4+ T-cell response to pneumonia in mice
inferredcites →https://doi.org/10.1080/08958370490439650openalex-snapshot
Long-Term Clearance Kinetics of Inhaled Ultrafine Insoluble Iridium Particles from the Rat Lung, Including Transient Translocation into Secondary Organs
inferredcites →https://doi.org/10.1084/jem.20131199openalex-snapshot
Alveolar macrophages develop from fetal monocytes that differentiate into long-lived cells in the first week of life via GM-CSF
inferredcites →https://doi.org/10.1084/jem.20162152openalex-snapshot
Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span
inferredcites →https://doi.org/10.1093/gerona/glx090openalex-snapshot
The Intersection of Aging Biology and the Pathobiology of Lung Diseases: A Joint NHLBI/NIA Workshop
inferredcites →https://doi.org/10.1093/nar/gku154openalex-snapshot
A Bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data
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Infection Hospitalization Increases Risk of Dementia in the Elderly*
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Heterochronic parabiosis: historical perspective and methodological considerations for studies of aging and longevity
inferredcites →https://doi.org/10.1111/ajt.13819openalex-snapshot
Long-Term Persistence of Donor Alveolar Macrophages in Human Lung Transplant Recipients That Influences Donor-Specific Immune Responses
inferredcites →https://doi.org/10.1126/sciadv.aau6986openalex-snapshot
TET2 coactivates gene expression through demethylation of enhancers
inferredcites →https://doi.org/10.1126/science.1251086openalex-snapshot
Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity
inferredcites →https://doi.org/10.1126/science.aaf1098openalex-snapshot
Trained immunity: A program of innate immune memory in health and disease
inferredcites →https://doi.org/10.1126/science.aal3222openalex-snapshot
An environment-dependent transcriptional network specifies human microglia identity
inferredcites →https://doi.org/10.1128/jvi.02602-07openalex-snapshot
Alveolar Macrophages Are Indispensable for Controlling Influenza Viruses in Lungs of Pigs
inferredcites →https://doi.org/10.1152/ajplung.00026.2010openalex-snapshot
Repetitive intratracheal bleomycin models several features of idiopathic pulmonary fibrosis
inferredcites →https://doi.org/10.1161/circulationaha.111.040766openalex-snapshot
Cardiac Complications in Patients With Community-Acquired Pneumonia
inferredcites →https://doi.org/10.1164/ajrccm.149.3.8118630openalex-snapshot
Radiographic Resolution Of Community-Acquired Pneumonia
inferredcites →https://doi.org/10.1164/rccm.201011-1891ocopenalex-snapshot
Fas Determines Differential Fates of Resident and Recruited Macrophages during Resolution of Acute Lung Injury
inferredcites →https://doi.org/10.1164/rccm.201212-2341ocopenalex-snapshot
Population-based Incidence Estimates of Influenza-associated Respiratory Failure Hospitalizations, 2003 to 2009
inferredcites →https://doi.org/10.1165/rcmb.2013-0086maopenalex-snapshot
Flow Cytometric Analysis of Macrophages and Dendritic Cell Subsets in the Mouse Lung
inferredcites →https://doi.org/10.1165/rcmb.2017-0154ocopenalex-snapshot
Deletion of c-FLIP from CD11bhi Macrophages Prevents Development of Bleomycin-induced Lung Fibrosis
inferredcites →https://doi.org/10.1165/rcmb.2019-0150tropenalex-snapshot
A Practical Guide to the Measurement and Analysis of DNA Methylation
inferredcites →https://doi.org/10.1172/jci.insight.123287openalex-snapshot
Multidimensional assessment of alveolar T cells in critically ill patients
inferredcites →https://doi.org/10.1172/jci124615openalex-snapshot
The role of macrophages in the resolution of inflammation
inferredcites →https://doi.org/10.1172/jci75157openalex-snapshot
β2-Adrenergic agonists augment air pollution–induced IL-6 release and thrombosis
inferredcites →https://doi.org/10.1182/blood-2015-01-624809openalex-snapshot
Transcriptome analysis highlights the conserved difference between embryonic and postnatal-derived alveolar macrophages
inferredcites →https://doi.org/10.1289/ehp.9685openalex-snapshot
Efficient Elimination of Inhaled Nanoparticles from the Alveolar Region: Evidence for Interstitial Uptake and Subsequent Reentrainment onto Airways Epithelium
inferredcites →https://doi.org/10.1371/journal.pone.0074361openalex-snapshot
Busulfan Administration Flexibility Increases the Applicability of Scid Repopulating Cell Assay in NSG Mouse Model
inferredcites →https://doi.org/10.3791/50556openalex-snapshot
Parabiosis in Mice: A Detailed Protocol
inferredcites →https://doi.org/10.4049/jimmunol.1700397openalex-snapshot
Aging Impairs Alveolar Macrophage Phagocytosis and Increases Influenza-Induced Mortality in Mice

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/jlb.3hi0620-399rropenalex-snapshot
Advanced age is associated with changes in alveolar macrophages and their responses to the stress of traumatic injury
inferred← citeshttps://doi.org/10.1016/j.cell.2021.03.005openalex-snapshot
The aging lung: Physiology, disease, and immunity
inferred← citeshttps://doi.org/10.1016/j.cyto.2025.156902openalex-snapshot
Evaluating the evidence for GM-CSF as a host-directed therapy in respiratory infections
inferred← citeshttps://doi.org/10.1038/s41590-020-00849-2openalex-snapshot
Does tissue imprinting restrict macrophage plasticity?
inferred← citeshttps://doi.org/10.1039/9781837676439-00344openalex-snapshot
Polymeric Nanoparticles Targeting Lung Innate Immune Cells
inferred← citeshttps://doi.org/10.1101/2020.02.26.965566openalex-snapshot
Resetting proteostasis with ISRIB prevents pulmonary fibrosis
inferred← citeshttps://doi.org/10.1101/2020.05.28.121541openalex-snapshot
Alterations of multiple alveolar macrophage states in chronic obstructive pulmonary disease
inferred← citeshttps://doi.org/10.1146/annurev-chembioeng-082223-105117openalex-snapshot
Nanoparticle-Based Pulmonary Immune Engineering
inferred← citeshttps://doi.org/10.1183/13993003.00646-2019openalex-snapshot
A spatially restricted fibrotic niche in pulmonary fibrosis is sustained by M-CSF/M-CSFR signalling in monocyte-derived alveolar macrophages
inferred← citeshttps://doi.org/10.1186/s12915-026-02672-xopenalex-snapshot
Shared and niche-specific transcriptional signatures of macrophage aging revealed by a cross-tissue meta-analysis
inferred← citeshttps://doi.org/10.1186/s12951-024-02743-7openalex-snapshot
Age-dependent changes in phagocytic activity: in vivo response of mouse pulmonary antigen presenting cells to direct lung delivery of charged PEGDA nanoparticles
inferred← citeshttps://doi.org/10.26508/lsa.202000800openalex-snapshot
PGE2accounts for bidirectional changes in alveolar macrophage self-renewal with aging and smoking
inferred← citeshttps://doi.org/10.3389/fmed.2020.606462openalex-snapshot
Senescence in Pulmonary Fibrosis: Between Aging and Exposure
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