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A missing link in mutualistic networks: symbiotic fungi in plant-animal interactions

https://doi.org/10.1101/761270
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Feeding ecology of a group of buffy‐headed marmosets (Callithrix flaviceps): fungi as a preferred resource
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Culture-Free Survey Reveals Diverse and Distinctive Fungal Communities Associated with Developing Figs (Ficus spp.) in Panama
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The modularity of seed dispersal: differences in structure and robustness between bat– and bird–fruit networks
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Comparison of the diversity, composition, and host recurrence of xylariaceous endophytes in subtropical, cool temperate, and subboreal regions in Japan
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Molecular tools in rhizosphere microbiology—from single-cell to whole-community analysis
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Effect of canopy closure on pollen dispersal in a wind-pollinated species (Fagus sylvatica L.)
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Assessment of soil fungal communities using pyrosequencing
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Plant-associated fungal communities in the light of meta’omics
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Predation, apparent competition, and the structure of prey communities
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Indirect effects in community ecology: Their definition, study and importance
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Post-dispersal seed mortality of exotic and native species: Effects of fungal pathogens and seed predators
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Endophytes as in vitro production platforms of high value plant secondary metabolites
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Consumption of hypogeous and epigeous fungi by the red squirrel (Sciurus vulgaris) in subalpine conifer forests
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Fungal endophyte diversity in coffee plants from Colombia, Hawai'i, Mexico and Puerto Rico
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Wild trees in the Amazon basin harbor a great diversity of beneficial endosymbiotic fungi: is this evidence of protective mutualism?
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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
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Interactions between mammals and ectomycorrhizal fungi
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Dimensions of plant disease in tropical forests
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The selection, testing and application of terrestrial insects as bioindicators
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Fungal endophytes in dicotyledonous neotropical trees: patterns of abundance and diversity
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Mycorrhizal effectiveness of Rhizopogon spores recovered from faecal pellets of small forest-dwelling mammals
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Stability criteria for complex ecosystems
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An Integrated Metagenomics/Metaproteomics Investigation of the Microbial Communities and Enzymes in Solid-state Fermentation of Pu-erh tea
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Plant Succession, Landscape Management, and the Ecology of Frugivorous Birds in Abandoned Amazonian Pastures
inferredcites →https://doi.org/10.1073/pnas.0805017105openalex-snapshot
Explosively launched spores of ascomycete fungi have drag-minimizing shapes
inferredcites →https://doi.org/10.1073/pnas.2533483100openalex-snapshot
Fungal endophytes limit pathogen damage in a tropical tree
inferredcites →https://doi.org/10.1079/9781845930615.0000openalex-snapshot
Microbial ecology of aerial plant surfaces
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Phyllosphere microbiology: a perspective.
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Competitive Interactions in Ecosystems
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The Consequences of Direct versus Indirect Species Interactions to Selection on Traits: Pollination and Nectar Robbing in Ipomopsis aggregata
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Search and clustering orders of magnitude faster than BLAST
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UCHIME improves sensitivity and speed of chimera detection
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Implications of a specialized diet for the foraging behavior of the Honduran white bat, Ectophylla alba (Chiroptera: Phyllostomidae)
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Indirect Effects in Communities and Ecosystems
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Old World fruit bats can be long–distance seed dispersers through extended retention of viable seeds in the gut
inferredcites →https://doi.org/10.1098/rspb.2010.1371openalex-snapshot
Missing and forbidden links in mutualistic networks
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The assembly and disassembly of ecological networks
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Pyrosequencing reveals regional differences in fruit‐associated fungal communities
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Effect of ingestion by five avian dispersers on the retention time, retrieval and germination of Ruppia maritima seeds
inferredcites →https://doi.org/10.1111/j.1365-2745.2011.01819.xopenalex-snapshot
Herbivore-induced changes in fruit-frugivore interactions
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Species delimitation in fungal endophyte diversity studies and its implications in ecological and biogeographic inferences
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Non‐parametric multivariate analyses of changes in community structure
inferredcites →https://doi.org/10.1111/j.1461-0248.2007.01137.xopenalex-snapshot
Network structural properties mediate the stability of mutualistic communities
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Long‐term observation of a pollination network: fluctuation in species and interactions, relative invariance of network structure and implications for estimates of specialization
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Parasites in food webs: the ultimate missing links
inferredcites →https://doi.org/10.1111/j.1461-0248.2011.01629.xopenalex-snapshot
Indirect plant-mediated interactions among parasitoid larvae
inferredcites →https://doi.org/10.1111/j.1469-185x.1997.tb00029.xopenalex-snapshot
The selection, testing and application of terrestrial insects as bioindicators
inferredcites →https://doi.org/10.1111/j.1469-7998.1990.tb03771.xopenalex-snapshot
Tent selection, roosting ecology and social organization of the tent‐making bat, Ectophylla alba, in Costa Rica
inferredcites →https://doi.org/10.1111/j.1469-8137.2009.02773.xopenalex-snapshot
Fungal endophytes: diversity and functional roles
inferredcites →https://doi.org/10.1111/j.1574-6941.2012.01437.xopenalex-snapshot
New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities
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Improving indicator species analysis by combining groups of sites
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Seed Dispersal by Bats and Birds in Forest and Disturbed Habitats of Chiapas, Mexico 1
inferredcites →https://doi.org/10.1111/j.1749-6632.2011.06004.xopenalex-snapshot
Ecosystem services provided by bats
inferredcites →https://doi.org/10.1111/jvs.12226openalex-snapshot
Communities: are they groups of hidden interactions?
inferredcites →https://doi.org/10.1111/mec.12481openalex-snapshot
Towards a unified paradigm for sequence‐based identification of fungi
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/aem.02318-09openalex-snapshot
Morphological Response of the Halophilic Fungal Genus Wallemia to High Salinity
inferredcites →https://doi.org/10.1146/annurev-phyto-080508-081831openalex-snapshot
Hidden Fungi, Emergent Properties: Endophytes and Microbiomes
inferredcites →https://doi.org/10.1146/annurev.ecolsys.35.112202.130132openalex-snapshot
Application of Ecological Indicators
inferredcites →https://doi.org/10.1146/annurev.ecolsys.38.091206.095818openalex-snapshot
Plant-Animal Mutualistic Networks: The Architecture of Biodiversity
inferredcites →https://doi.org/10.1146/annurev.es.02.110171.002341openalex-snapshot
Seed Predation by Animals
inferredcites →https://doi.org/10.1146/annurev.es.25.110194.002303openalex-snapshot
THE NATURE AND CONSEQUENCES OF INDIRECT EFFECTS IN ECOLOGICAL COMMUNITIES
inferredcites →https://doi.org/10.1146/annurev.phyto.43.040204.135958openalex-snapshot
Mechanisms of Fungal Speciation
inferredcites →https://doi.org/10.1146/annurev.py.30.090192.003131openalex-snapshot
Biological Control in the Phyllosphere
inferredcites →https://doi.org/10.1264/jsme2.me14121openalex-snapshot
A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts
inferredcites →https://doi.org/10.1371/journal.ppat.1004277openalex-snapshot
From Dandruff to Deep-Sea Vents: Malassezia-like Fungi Are Ecologically Hyper-diverse
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A Field Guide to the Mammals of Central America and Southeast Mexico
inferredcites →https://doi.org/10.1890/07-0219.1openalex-snapshot
CAVITY EXCAVATION AND ENLARGEMENT AS MECHANISMS FOR INDIRECT INTERACTIONS IN AN AVIAN COMMUNITY
inferredcites →https://doi.org/10.1890/07-1939.1openalex-snapshot
The temporal dynamics of resource use by frugivorous birds: a network approach
inferredcites →https://doi.org/10.1890/080026openalex-snapshot
Mutualistic networks
inferredcites →https://doi.org/10.1890/13-0133.1openalex-snapshot
Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies
inferredcites →https://doi.org/10.2174/1389200216666150812124625openalex-snapshot
Characterization of Fungal and Bacterial Components in Gut/Fecal Microbiome
inferredcites →https://doi.org/10.2307/1379953openalex-snapshot
Foraging and Day-Roosting Dynamics of Canopy Fruit Bats in Panama
inferredcites →https://doi.org/10.2307/2258936openalex-snapshot
Dynamics of Populations.
inferredcites →https://doi.org/10.3161/150811008x331126openalex-snapshot
Roosting requirements of white tent-making bat Ectophylla alba (Chiroptera: Phyllostomidae)
inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot
vegan: Community Ecology Package
inferredcites →https://doi.org/10.3390/ijms150915272openalex-snapshot
Endophytic Fungi from Lycium chinense Mill and Characterization of Two New Korean Records of Colletotrichum
inferredcites →https://doi.org/10.3852/09-161openalex-snapshot
Diversity, abundance and community network structure in sporocarp-associated beetle communities of the central Appalachian Mountains
inferredcites →https://doi.org/10.3852/10-388openalex-snapshot
95 % of basidiospores fall within 1 m of the cap: a field-and modeling-based study
inferredcites →https://doi.org/10.5860/choice.43-6509openalex-snapshot
Biotic interactions in the tropics: their role in the maintenance of species diversity
inferredcites →https://doi.org/10.7717/peerj.1259openalex-snapshot
Metatranscriptomic analysis of a high-sulfide aquatic spring reveals insights into sulfur cycling and unexpected aerobic metabolism

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Gut mycobiome alterations in obesity in geographically different regions
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