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A diet-dependent enzyme from the human gut microbiome promotes Th17 cell accumulation and colitis

https://doi.org/10.1101/766899
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471142735.im1525s104openalex-snapshot
Dextran Sulfate Sodium (DSS)‐Induced Colitis in Mice
inferredcites →https://doi.org/10.1002/art.27584openalex-snapshot
2010 Rheumatoid arthritis classification criteria: An American College of Rheumatology/European League Against Rheumatism collaborative initiative
inferredcites →https://doi.org/10.1002/art.39783openalex-snapshot
Dysbiosis Contributes to Arthritis Development via Activation of Autoreactive T Cells in the Intestine
inferredcites →https://doi.org/10.1002/eji.201242740openalex-snapshot
Small molecule inhibitors of ROR γt: Targeting T h17 cells and other applications
inferredcites →https://doi.org/10.1007/s00253-014-5881-6openalex-snapshot
Induction and carbon catabolite repression of phenol degradation genes in Rhodococcus erythropolis and Rhodococcus jostii
inferredcites →https://doi.org/10.1007/s13311-017-0587-yopenalex-snapshot
The Role of the Gut Microbiome in Multiple Sclerosis Risk and Progression: Towards Characterization of the “MS Microbiome”
inferredcites →https://doi.org/10.1016/j.cell.2009.09.033openalex-snapshot
Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria
inferredcites →https://doi.org/10.1016/j.cell.2014.03.011openalex-snapshot
Role of the Microbiota in Immunity and Inflammation
inferredcites →https://doi.org/10.1016/j.cell.2014.08.006openalex-snapshot
Immunoglobulin A Coating Identifies Colitogenic Bacteria in Inflammatory Bowel Disease
inferredcites →https://doi.org/10.1016/j.cell.2015.08.058openalex-snapshot
Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells
inferredcites →https://doi.org/10.1016/j.cell.2015.08.061openalex-snapshot
An IL-23R/IL-22 Circuit Regulates Epithelial Serum Amyloid A to Promote Local Effector Th17 Responses
inferredcites →https://doi.org/10.1016/j.cell.2016.09.031openalex-snapshot
L-Arginine Modulates T Cell Metabolism and Enhances Survival and Anti-tumor Activity
inferredcites →https://doi.org/10.1016/j.cell.2017.01.022openalex-snapshot
Mining the Human Gut Microbiota for Immunomodulatory Organisms
inferredcites →https://doi.org/10.1016/j.cell.2020.04.027openalex-snapshot
Ketogenic Diets Alter the Gut Microbiome Resulting in Decreased Intestinal Th17 Cells
inferredcites →https://doi.org/10.1016/j.celrep.2016.11.073openalex-snapshot
Inhibition of RORγT Skews TCRα Gene Rearrangement and Limits T Cell Repertoire Diversity
inferredcites →https://doi.org/10.1016/j.chom.2014.12.009openalex-snapshot
MyD88 Signaling in T Cells Directs IgA-Mediated Control of the Microbiota to Promote Health
inferredcites →https://doi.org/10.1016/j.chom.2020.04.006openalex-snapshot
A Genomic Toolkit for the Mechanistic Dissection of Intractable Human Gut Bacteria
inferredcites →https://doi.org/10.1016/j.cmet.2017.05.008openalex-snapshot
Understanding the Holobiont: How Microbial Metabolites Affect Human Health and Shape the Immune System
inferredcites →https://doi.org/10.1016/j.immuni.2018.12.015openalex-snapshot
Microbiotas from Humans with Inflammatory Bowel Disease Alter the Balance of Gut Th17 and RORγt+ Regulatory T Cells and Exacerbate Colitis in Mice
inferredcites →https://doi.org/10.1016/j.tips.2014.07.006openalex-snapshot
Targeting Th17 cells in autoimmune diseases
inferredcites →https://doi.org/10.1038/nature08821openalex-snapshot
A human gut microbial gene catalogue established by metagenomic sequencing
inferredcites →https://doi.org/10.1038/nature09978openalex-snapshot
Digoxin and its derivatives suppress TH17 cell differentiation by antagonizing RORγt activity
inferredcites →https://doi.org/10.1038/nature12820openalex-snapshot
Diet rapidly and reproducibly alters the human gut microbiome
inferredcites →https://doi.org/10.1038/nbt.2939openalex-snapshot
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
inferredcites →https://doi.org/10.1038/ni0111-5openalex-snapshot
Diet, gut microbiota and immune responses
inferredcites →https://doi.org/10.1038/nm.3914openalex-snapshot
The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment
inferredcites →https://doi.org/10.1038/nri.2016.70openalex-snapshot
A guide to immunometabolism for immunologists
inferredcites →https://doi.org/10.1038/nri1668openalex-snapshot
Regulation of immune responses by L-arginine metabolism
inferredcites →https://doi.org/10.1038/s41577-019-0144-5openalex-snapshot
Mining the microbiota for microbial and metabolite-based immunotherapies
inferredcites →https://doi.org/10.1038/s41586-019-1785-zopenalex-snapshot
Bile acid metabolites control TH17 and Treg cell differentiation
inferredcites →https://doi.org/10.1038/s41587-020-0603-3openalex-snapshot
A unified catalog of 204,938 reference genomes from the human gut microbiome
inferredcites →https://doi.org/10.1073/pnas.0706625104openalex-snapshot
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
inferredcites →https://doi.org/10.1073/pnas.1000082107openalex-snapshot
Proinflammatory T-cell responses to gut microbiota promote experimental autoimmune encephalomyelitis
inferredcites →https://doi.org/10.1073/pnas.1617460113openalex-snapshot
Identifying species of symbiont bacteria from the human gut that, alone, can induce intestinal Th17 cells in mice
inferredcites →https://doi.org/10.1073/pnas.1711235114openalex-snapshot
Gut bacteria from multiple sclerosis patients modulate human T cells and exacerbate symptoms in mouse models
inferredcites →https://doi.org/10.1074/jbc.m111.254003openalex-snapshot
Structural Basis of Digoxin That Antagonizes RORγt Receptor Activity and Suppresses Th17 Cell Differentiation and Interleukin (IL)-17 Production
inferredcites →https://doi.org/10.1093/bioinformatics/btv382openalex-snapshot
MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome
inferredcites →https://doi.org/10.1101/304840openalex-snapshot
Illuminating the microbiome’s dark matter: a functional genomic toolkit for the study of human gut Actinobacteria
inferredcites →https://doi.org/10.1101/gr.201863.115openalex-snapshot
An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography
inferredcites →https://doi.org/10.1111/1751-2980.12795openalex-snapshot
Correlation of diet, microbiota and metabolite networks in inflammatory bowel disease
inferredcites →https://doi.org/10.1126/science.1198469openalex-snapshot
Induction of Colonic Regulatory T Cells by Indigenous Clostridium Species
inferredcites →https://doi.org/10.1126/science.1206095openalex-snapshot
The Toll-Like Receptor 2 Pathway Establishes Colonization by a Commensal of the Human Microbiota
inferredcites →https://doi.org/10.1126/science.1223490openalex-snapshot
Interactions Between the Microbiota and the Immune System
inferredcites →https://doi.org/10.1126/science.1235872openalex-snapshot
Predicting and Manipulating Cardiac Drug Inactivation by the Human Gut Bacterium Eggerthella lenta
inferredcites →https://doi.org/10.1126/science.aat4042openalex-snapshot
Endocytosis of commensal antigens by intestinal epithelial cells regulates mucosal T cell homeostasis
inferredcites →https://doi.org/10.1126/scitranslmed.3000322openalex-snapshot
The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice
inferredcites →https://doi.org/10.1186/2049-2618-2-15openalex-snapshot
Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis
inferredcites →https://doi.org/10.1371/journal.pone.0033546openalex-snapshot
L-arginine Supplementation Improves Responses to Injury and Inflammation in Dextran Sulfate Sodium Colitis
inferredcites →https://doi.org/10.1371/journal.pone.0067019openalex-snapshot
ANOVA-Like Differential Expression (ALDEx) Analysis for Mixed Population RNA-Seq
inferredcites →https://doi.org/10.2353/ajpath.2008.080622openalex-snapshot
NKT Cell-Dependent Amelioration of a Mouse Model of Multiple Sclerosis by Altering Gut Flora
inferredcites →https://doi.org/10.3389/fendo.2015.00049openalex-snapshot
Endogenous Digitalis-Like Factors: An Overview of the History
inferredcites →https://doi.org/10.3389/fmicb.2017.02224openalex-snapshot
Microbiome Datasets Are Compositional: And This Is Not Optional
inferredcites →https://doi.org/10.4049/jimmunol.160.11.5347openalex-snapshot
Alternative Metabolic States in Murine Macrophages Reflected by the Nitric Oxide Synthase/Arginase Balance: Competitive Regulation by CD4+ T Cells Correlates with Th1/Th2 Phenotype
inferredcites →https://doi.org/10.7554/elife.33953openalex-snapshot
Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41467-021-25213-2openalex-snapshot
Gut microbiome-mediated metabolism effects on immunity in rural and urban African populations
inferred← citeshttps://doi.org/10.1186/s13073-021-00853-7openalex-snapshot
Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis
inferred← citeshttps://doi.org/10.3389/fcimb.2022.804644openalex-snapshot
Diagnostic, Prognostic, and Therapeutic Roles of Gut Microbiota in COVID-19: A Comprehensive Systematic Review
inferred← citeshttps://doi.org/10.3389/fgene.2023.1153847openalex-snapshot
Investigating causal relationships between the gut microbiota and allergic diseases: A mendelian randomization study
inferred← citeshttps://doi.org/10.3389/fmicb.2022.904758openalex-snapshot
Different Fecal Microbiota in Hirschsprung's Patients With and Without Associated Enterocolitis
inferred← citeshttps://doi.org/10.3390/nu12041082openalex-snapshot
Gut Microbiome, Intestinal Permeability, and Tissue Bacteria in Metabolic Disease: Perpetrators or Bystanders?
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