On the public citation graph

Empirical Analysis of Phylogenetic Quasi-Terraces

https://doi.org/10.1101/810309
0 signed · 42 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf02100115openalex-snapshot
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
inferredcites →https://doi.org/10.1007/bf02109483openalex-snapshot
Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
inferredcites →https://doi.org/10.1007/bf02352289openalex-snapshot
Maximum-likelihood models for combined analyses of multiple sequence data
inferredcites →https://doi.org/10.1016/0025-5564(81)90043-2openalex-snapshot
Comparison of phylogenetic trees
inferredcites →https://doi.org/10.1016/j.ympev.2008.01.035openalex-snapshot
Large multi-gene phylogenetic trees of the grasses (Poaceae): Progress towards complete tribal and generic level sampling
inferredcites →https://doi.org/10.1016/j.ympev.2009.08.004openalex-snapshot
Patterns of macroevolution among Primates inferred from a supermatrix of mitochondrial and nuclear DNA
inferredcites →https://doi.org/10.1016/j.ympev.2010.11.006openalex-snapshot
The phylogeny of advanced snakes (Colubroidea), with discovery of a new subfamily and comparison of support methods for likelihood trees
inferredcites →https://doi.org/10.1016/j.ympev.2014.04.003openalex-snapshot
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families
inferredcites →https://doi.org/10.1016/j.ympev.2014.12.003openalex-snapshot
Building the avian tree of life using a large-scale, sparse supermatrix
inferredcites →https://doi.org/10.1017/s0001867800037587openalex-snapshot
The probabilities of rooted tree-shapes generated by random bifurcation
inferredcites →https://doi.org/10.1017/s001667231000008xopenalex-snapshot
A supermatrix-based molecular phylogeny of the family Drosophilidae
inferredcites →https://doi.org/10.1038/nature12872openalex-snapshot
Three keys to the radiation of angiosperms into freezing environments
inferredcites →https://doi.org/10.1073/pnas.1323926111openalex-snapshot
Phylotranscriptomic analysis of the origin and early diversification of land plants
inferredcites →https://doi.org/10.1080/10635150252899824openalex-snapshot
Fragmentary Taxa, Missing Data, and Ambiguity: Mistaken Assumptions and Conclusions
inferredcites →https://doi.org/10.1080/10635150290069913openalex-snapshot
An Approximately Unbiased Test of Phylogenetic Tree Selection
inferredcites →https://doi.org/10.1093/bioinformatics/btq205openalex-snapshot
Time and memory efficient likelihood-based tree searches on phylogenomic alignments with missing data
inferredcites →https://doi.org/10.1093/bioinformatics/bty384openalex-snapshot
Two C++ libraries for counting trees on a phylogenetic terrace
inferredcites →https://doi.org/10.1093/molbev/mst196openalex-snapshot
Decisive Data Sets in Phylogenomics: Lessons from Studies on the Phylogenetic Relationships of Primarily Wingless Insects
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/molbev/msv081openalex-snapshot
Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026201openalex-snapshot
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
inferredcites →https://doi.org/10.1093/sysbio/syr025openalex-snapshot
Missing Data in Phylogenetic Analysis: Reconciling Results from Simulations and Empirical Data
inferredcites →https://doi.org/10.1093/sysbio/sys088openalex-snapshot
Using Supermatrices for Phylogenetic Inquiry: An Example Using the Sedges
inferredcites →https://doi.org/10.1093/sysbio/syu025openalex-snapshot
Analysis and Visualization of Complex Macroevolutionary Dynamics: An Example from Australian Scincid Lizards
inferredcites →https://doi.org/10.1093/sysbio/syv024openalex-snapshot
Impacts of Terraces on Phylogenetic Inference
inferredcites →https://doi.org/10.1093/sysbio/syw037openalex-snapshot
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
inferredcites →https://doi.org/10.1093/sysbio/syz001openalex-snapshot
Homoplasy-Based Partitioning Outperforms Alternatives in Bayesian Analysis of Discrete Morphological Data
inferredcites →https://doi.org/10.1093/sysbio/syz021openalex-snapshot
The Relative Importance of Modeling Site Pattern Heterogeneity Versus Partition-Wise Heterotachy in Phylogenomic Inference
inferredcites →https://doi.org/10.1098/rspb.2001.1862openalex-snapshot
Inferring confidence sets of possibly misspecified gene trees
inferredcites →https://doi.org/10.1098/rspb.2013.0184openalex-snapshot
Large-scale phylogeny of chameleons suggests African origins and Eocene diversification
inferredcites →https://doi.org/10.1101/447110openalex-snapshot
RAxML-NG: A fast, scalable, and user-friendly tool for maximum likelihood phylogenetic inference
inferredcites →https://doi.org/10.1101/467449openalex-snapshot
Linking Branch Lengths Across Loci Provides the Best Fit for Phylogenetic Inference
inferredcites →https://doi.org/10.1111/evo.12681openalex-snapshot
Speciation dynamics during the global radiation of extant bats
inferredcites →https://doi.org/10.1126/science.1206357openalex-snapshot
Terraces in Phylogenetic Tree Space
inferredcites →https://doi.org/10.1126/science.1211028openalex-snapshot
Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification
inferredcites →https://doi.org/10.1126/science.1257570openalex-snapshot
Phylogenomics resolves the timing and pattern of insect evolution
inferredcites →https://doi.org/10.1186/1741-7007-10-12openalex-snapshot
Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates
inferredcites →https://doi.org/10.1186/s12862-018-1162-9openalex-snapshot
The prevalence of terraced treescapes in analyses of phylogenetic data sets
inferredcites →https://doi.org/10.1371/journal.pone.0035495openalex-snapshot
Perceptions and Experiences of Research Participants on Gender-Based Violence Community Based Survey: Implications for Ethical Guidelines
inferredcites →https://doi.org/10.1371/journal.pone.0049521openalex-snapshot
Macroevolutionary Dynamics and Historical Biogeography of Primate Diversification Inferred from a Species Supermatrix
inferredcites →https://doi.org/10.3732/ajb.1300044openalex-snapshot
Phylogenetic relationships and character evolution analysis of Saxifragales using a supermatrix approach

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1101/2023.01.19.524678openalex-snapshot
Gentrius: identifying equally scoring trees in phylogenomics with incomplete data
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.