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Multiple chromosomal inversions contribute to adaptive divergence of a dune sunflower ecotype

https://doi.org/10.1101/829622
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)
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The genic view of the process of speciation
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Chromosomal inversions and the reproductive isolation of species
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The variant call format and VCFtools
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INVERSIONS IN THE CHROMOSOMES OF DROSOPHILA PSEUDOOBSCURA
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DIVERGENCE IS FOCUSED ON FEW GENOMIC REGIONS EARLY IN SPECIATION: INCIPIENT SPECIATION OF SUNFLOWER ECOTYPES
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Multiple reproductive barriers separate recently diverged sunflower ecotypes
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Recombination and speciation
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Adaptation with gene flow across the landscape in a dune sunflower
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Are hybrid species more fit than ancestral parent species in the current hybrid species habitats?
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SKEPTICISM TOWARDS SANTA ROSALIA, OR WHY ARE THERE SO FEW KINDS OF ANIMALS?
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CHROMOSOMAL INVERSIONS AND SPECIES DIFFERENCES: WHEN ARE GENES AFFECTING ADAPTIVE DIVERGENCE AND REPRODUCTIVE ISOLATION EXPECTED TO RESIDE WITHIN INVERSIONS?
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THE EFFICACY OF DIVERGENCE HITCHHIKING IN GENERATING GENOMIC ISLANDS DURING ECOLOGICAL SPECIATION
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THE EFFICACY OF DIVERGENCE HITCHHIKING IN GENERATING GENOMIC ISLANDS DURING ECOLOGICAL SPECIATION
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Recent nonhybrid origin of sunflower ecotypes in a novel habitat
inferredcites →https://doi.org/10.1111/mec.13592openalex-snapshot
Two adjacent inversions maintain genomic differentiation between migratory and stationary ecotypes of Atlantic cod
inferredcites →https://doi.org/10.1111/mec.14972openalex-snapshot
Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes
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Retention of a chromosomal inversion from an anadromous ancestor provides the genetic basis for alternative freshwater ecotypes in rainbow trout
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Optical mapping in plant comparative genomics
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Genomic Islands of Speciation in Anopheles gambiae
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A Widespread Chromosomal Inversion Polymorphism Contributes to a Major Life-History Transition, Local Adaptation, and Reproductive Isolation
inferredcites →https://doi.org/10.1371/journal.pone.0003376openalex-snapshot
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
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Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach
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The ecology and genetics of adaptation and speciation in dune sunflowers
inferredcites →https://doi.org/10.1534/genetics.105.047985openalex-snapshot
Chromosome Inversions, Local Adaptation and Speciation
inferredcites →https://doi.org/10.1534/genetics.115.181453openalex-snapshot
Genome-Wide Scan for Adaptive Divergence and Association with Population-Specific Covariates
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Local PCA Shows How the Effect of Population Structure Differs Along the Genome
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Comparative Mapping and Rapid Karyotypic Evolution in the Genus Helianthus
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Algorithm AS 136: A K-Means Clustering Algorithm
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Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Did dysploid waves follow the pulses of whole genome duplications?
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A Roadmap for Understanding the Evolutionary Significance of Structural Genomic Variation
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A high-quality reference genome for the common creek chub, Semotilus atromaculatus
inferred← citeshttps://doi.org/10.1101/737155openalex-snapshot
Ancestral reconstruction of sunflower karyotypes reveals non-random chromosomal evolution
inferred← citeshttps://doi.org/10.1111/jeb.14242openalex-snapshot
How chromosomal inversions reorient the evolutionary process
inferred← citeshttps://doi.org/10.1111/jipb.13905openalex-snapshot
Population genomic analysis unravels the evolutionary processes leading to budding speciation
inferred← citeshttps://doi.org/10.1111/mec.16307openalex-snapshot
Environmentally associated chromosomal structural variation influences fine‐scale population structure of Atlantic Salmon (Salmo salar)
inferred← citeshttps://doi.org/10.1111/mec.16785openalex-snapshot
Adaptation to distinct habitats is maintained by contrasting selection at different life stages in sunflower ecotypes
inferred← citeshttps://doi.org/10.1111/mec.17075openalex-snapshot
When adaptation is slowed down: Genomic analysis of evolutionary stasis in thermal tolerance during biological invasion in a novel climate
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Unidirectional trans‐Atlantic gene flow and a mixed spawning area shape the genetic connectivity of Atlantic bluefin tuna
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The genomic consequences of selection across development
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Chromosomal inversions harbour excess mutational load in the coral, Acropora kenti , on the Great Barrier Reef
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Genomic Architecture Underlying the Striking Colour Variation in the Presence of Gene Flow for the Guinan Toad‐Headed Lizard
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Putting Structural Variants Into Practice: The Role of Chromosomal Inversions in the Management of Marine Environments
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Genome Architecture and Speciation in Plants and Animals
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A chromosomal inversion contributes to divergence in multiple traits between deer mouse ecotypes
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Repeated evolution on oceanic islands: comparative genomics reveals species-specific processes in birds
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Detecting inversions with PCA in the presence of population structure
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Ancestral Reconstruction of Karyotypes Reveals an Exceptional Rate of Nonrandom Chromosomal Evolution in Sunflower
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Selection and population demography shape evolution of two long-lived ectotherms
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Climate Vulnerability Assessment of the Espeletia Complex on Páramo Sky Islands in the Northern Andes
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Frequency, Origins, and Evolutionary Role of Chromosomal Inversions in Plants
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Harnessing Crop Wild Diversity for Climate Change Adaptation
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