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The complete mitochondrial genome of the endemic and highly specialized South African bee speciesRediviva intermixta(Hymenoptera: Melittidae), with a comparison with other bee mitogenomes

https://doi.org/10.1111/bij.12627
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Outgoing claims: the papers this work cites, builds on, or argues with.

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PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]
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Evolutionary trees from DNA sequences: A maximum likelihood approach
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Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
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Frequent Mitochondrial Gene Rearrangements at the Hymenopteran nad3-nad5 Junction
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The mitogenomic contributions to molecular phylogenetics and evolution of fishes: a 15-year retrospect
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The complete nucleotide sequence and gene organization of the mitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae)
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Analysis of family-level relationships in bees (Hymenoptera: Apiformes) using 28S and two previously unexplored nuclear genes: CAD and RNA polymerase II
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Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the Hymenoptera – A lineage with both rapidly and slowly evolving mitochondrial genomes
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Rooting phylogenies using gene duplications: An empirical example from the bees (Apoidea)
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MITOS: Improved de novo metazoan mitochondrial genome annotation
inferredcites →https://doi.org/10.1016/j.ympev.2013.08.013openalex-snapshot
Molecular phylogeny, biogeography, and host plant shifts in the bee genus Melitta (Hymenoptera: Anthophila)
inferredcites →https://doi.org/10.1016/j.ympev.2014.12.009openalex-snapshot
Higher-level phylogeny of the Hymenoptera inferred from mitochondrial genomes
inferredcites →https://doi.org/10.1016/s0014-5793(02)02328-1openalex-snapshot
The minimal tRNA: unique structure of Ascaris suum mitochondrial tRNA Ser UCU having a short T arm and lacking the entire D arm
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Mitochondrial pseudogenes: evolution's misplaced witnesses
inferredcites →https://doi.org/10.1016/s0169-5347(01)02182-6openalex-snapshot
Intramitochondrial recombination – is it why some mitochondrial genes sleep around?
inferredcites →https://doi.org/10.1016/s0305-1978(96)00042-7openalex-snapshot
Insect mitochondrial control region: A review of its structure, evolution and usefulness in evolutionary studies
inferredcites →https://doi.org/10.1016/s0959-437x(05)80116-9openalex-snapshot
Genetic novelties in mitochondrial genomes of multicellular animals
inferredcites →https://doi.org/10.1038/376163a0openalex-snapshot
Deducing the pattern of arthropod phytogeny from mitochondrial DNA rearrangements
inferredcites →https://doi.org/10.1038/sj.emboj.7600811openalex-snapshot
Dual‐mode recognition of noncanonical tRNAsSer by seryl‐tRNA synthetase in mammalian mitochondria
inferredcites →https://doi.org/10.1073/pnas.0604033103openalex-snapshot
The history of early bee diversification based on five genes plus morphology
inferredcites →https://doi.org/10.1073/pnas.0803076105openalex-snapshot
Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
inferredcites →https://doi.org/10.1080/00222933.2014.909069openalex-snapshot
Nest architecture and use of floral oil in the oil-collecting South African solitary beeRediviva intermixta(Cockerell) (Hymenoptera: Apoidea: Melittidae)
inferredcites →https://doi.org/10.1080/10635150290069913openalex-snapshot
An Approximately Unbiased Test of Phylogenetic Tree Selection
inferredcites →https://doi.org/10.1093/bib/bbs012openalex-snapshot
Using Tablet for visual exploration of second-generation sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1246openalex-snapshot
CONSEL: for assessing the confidence of phylogenetic tree selection
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/bts174openalex-snapshot
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
inferredcites →https://doi.org/10.1093/bioinformatics/btt117openalex-snapshot
freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/gbe/evu145openalex-snapshot
Evolutionary Dynamics of the Mitochondrial Genome in the Evaniomorpha (Hymenoptera)—A Group with an Intermediate Rate of Gene Rearrangement
inferredcites →https://doi.org/10.1093/genetics/133.1.97openalex-snapshot
The mitochondrial genome of the honeybee Apis mellifera: complete sequence and genome organization.
inferredcites →https://doi.org/10.1093/molbev/msp072openalex-snapshot
Characterization of 67 Mitochondrial tRNA Gene Rearrangements in the Hymenoptera Suggests That Mitochondrial tRNA Gene Position Is Selectively Neutral
inferredcites →https://doi.org/10.1093/molbev/mss020openalex-snapshot
PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses
inferredcites →https://doi.org/10.1093/molbev/mss075openalex-snapshot
Bayesian Phylogenetics with BEAUti and the BEAST 1.7
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/molbev/mst197openalex-snapshot
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
inferredcites →https://doi.org/10.1093/molbev/msu154openalex-snapshot
Bulk De Novo Mitogenome Assembly from Pooled Total DNA Elucidates the Phylogeny of Weevils (Coleoptera: Curculionoidea)
inferredcites →https://doi.org/10.1093/nar/27.8.1767openalex-snapshot
Animal mitochondrial genomes
inferredcites →https://doi.org/10.1093/nar/gki784openalex-snapshot
A unique tRNA recognition mechanism of Caenorhabditis elegans mitochondrial EF-Tu2
inferredcites →https://doi.org/10.1093/nar/gkm101openalex-snapshot
Evolutionary rates vary among rRNA structural elements
inferredcites →https://doi.org/10.1093/nar/gkr1131openalex-snapshot
Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements
inferredcites →https://doi.org/10.1093/nar/gkr771openalex-snapshot
Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026111openalex-snapshot
Evolutionary dynamics of a mitochondrial rearrangement "hot spot" in the Hymenoptera
inferredcites →https://doi.org/10.1098/rstb.1925.0002openalex-snapshot
II.—A mathematical theory of evolution, based on the conclusions of Dr. J. C. Willis, F. R. S
inferredcites →https://doi.org/10.1101/pdb.prot5448openalex-snapshot
Illumina Sequencing Library Preparation for Highly Multiplexed Target Capture and Sequencing
inferredcites →https://doi.org/10.1109/gce.2010.5676129openalex-snapshot
Creating the CIPRES Science Gateway for inference of large phylogenetic trees
inferredcites →https://doi.org/10.1111/1755-0998.12363openalex-snapshot
DNA barcoding largely supports 250 years of classical taxonomy: identifications for C entral E uropean bees ( H ymenoptera, A poidea partim)
inferredcites →https://doi.org/10.1111/j.1096-0031.2010.00329.xopenalex-snapshot
SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information
inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03014.xopenalex-snapshot
Molecular marker systems in insects: current trends and future avenues
inferredcites →https://doi.org/10.1111/j.1365-3113.2009.00479.xopenalex-snapshot
Phylogeny of the bee family Melittidae (Hymenoptera: Anthophila) based on combined molecular and morphological data
inferredcites →https://doi.org/10.1111/j.1438-8677.1984.tb01842.xopenalex-snapshot
THE DIASCIA FLOWER AND ITS BEE - AN OIL-BASED SYMBIOSIS IN SOUTHERN AFRICA
inferredcites →https://doi.org/10.1111/j.1558-5646.1990.tb03857.xopenalex-snapshot
POLLINATOR ADAPTATION TO OIL-SECRETING FLOWERS-REDIVIVAANDDIASCIA
inferredcites →https://doi.org/10.1111/j.1558-5646.1991.tb02651.xopenalex-snapshot
OIL FLOWERS AND OIL BEES: FURTHER EVIDENCE FOR POLLINATOR ADAPTATION
inferredcites →https://doi.org/10.1139/g08-066openalex-snapshot
Mitochondrial genome organization and phylogeny of two vespid wasps
inferredcites →https://doi.org/10.1146/annurev-ento-011613-162007openalex-snapshot
Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny
inferredcites →https://doi.org/10.1146/annurev-ento-120811-153633openalex-snapshot
The Impact of Molecular Data on Our Understanding of Bee Phylogeny and Evolution
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.002015openalex-snapshot
THE ECOLOGY OF OIL FLOWERS AND THEIR BEES
inferredcites →https://doi.org/10.11646/zootaxa.3517.1.4openalex-snapshot
Two new species of the South African endemic bee genus Rediviva Friese (Hymenoptera: Apoidea: Melittidae)
inferredcites →https://doi.org/10.1371/journal.pone.0023008openalex-snapshot
The Complete Mitochondrial Genome of the Asiatic Cavity-Nesting Honeybee Apis cerana (Hymenoptera: Apidae)
inferredcites →https://doi.org/10.1371/journal.pone.0027138openalex-snapshot
Mitogenome Phylogenetics: The Impact of Using Single Regions and Partitioning Schemes on Topology, Substitution Rate and Divergence Time Estimation
inferredcites →https://doi.org/10.1371/journal.pone.0029911openalex-snapshot
Combinations of Histone Modifications Mark Exon Inclusion Levels
inferredcites →https://doi.org/10.1371/journal.pone.0032826openalex-snapshot
Accelerated Evolution of Mitochondrial but Not Nuclear Genomes of Hymenoptera: New Evidence from Crabronid Wasps
inferredcites →https://doi.org/10.1590/s1415-47572006000300030openalex-snapshot
Mitochondrial tRNA gene translocations in highly eusocial bees
inferredcites →https://doi.org/10.1590/s1415-47572008000300010openalex-snapshot
The mitochondrial genome of the stingless bee Melipona bicolor (Hymenoptera, Apidae, Meliponini): sequence, gene organization and a unique tRNA translocation event conserved across the tribe Meliponini
inferredcites →https://doi.org/10.2317/jkes-703.12.1openalex-snapshot
Oil Collecting Bees Mostly of the Summer Rainfall Area of Southern Africa (Hymenoptera: Melittidae: Rediviva)
inferredcites →https://doi.org/10.3109/19401736.2012.744986openalex-snapshot
Complete mitochondrial genome of the dwarf honeybee,Apis florea(Hymenoptera: Apidae)
inferredcites →https://doi.org/10.3109/19401736.2013.863288openalex-snapshot
The mitochondrial genome of the black dwarf honey bee, Apis andreniformis (Hymenoptera: Apidae)
inferredcites →https://doi.org/10.3109/19401736.2014.905858openalex-snapshot
The complete mitochondrial genome of the invasive Africanized Honey Bee, Apis mellifera scutellata (Insecta: Hymenoptera: Apidae)
inferredcites →https://doi.org/10.3109/19401736.2014.987243openalex-snapshot
The complete mitochondrial genome of the Colletes gigas (Hymenoptera: Colletidae: Colletinae)
inferredcites →https://doi.org/10.3109/19401736.2014.989511openalex-snapshot
Mitochondrial genome of Hylaeus dilatatus (Hymenoptera: Colletidae)
inferredcites →https://doi.org/10.3109/19401736.2015.1036249openalex-snapshot
The complete mitochondrial genome of the pumpkin fruit fly, Bactrocera tau (Diptera: Tephritidae)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/jhr.97.119433zenodo-depositor-declared
Description and mitochondrial genome sequencing of a new species of inquiline gall wasp, Synergus nanlingensis (Hymenoptera, Cynipidae, Synergini), from China
inferred← citeshttps://doi.org/10.1007/s10528-024-10991-3openalex-snapshot
The Mitochondrial Genome of Melipona fasciculata (Apidae, Meliponini): Genome Organization and Comparative Analyses, Phylogenetic Implications and Divergence Time Estimations
inferred← citeshttps://doi.org/10.1016/j.aspen.2022.101987openalex-snapshot
Detection of two different mitochondrial genomes in a gall wasp species, Andricus mairei (Hymenoptera: Cynipoidea: Cynipidae)
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2019.12.135openalex-snapshot
Comparative mitogenomics of Hymenoptera reveals evolutionary differences in structure and composition
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Playing with extremes: Origins and evolution of exaggerated female forelegs in South African Rediviva bees
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.02.028openalex-snapshot
Gene arrangement and sequence of mitochondrial genomes yield insights into the phylogeny and evolution of bees and sphecid wasps (Hymenoptera: Apoidea)
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Four new mitochondrial genomes for the basal bee family Melittidae (Hymenoptera: Apoidea)
inferred← citeshttps://doi.org/10.1111/zsc.12468openalex-snapshot
Mitogenomic phylogeny of bee families confirms the basal position and monophyly of Melittidae
inferred← citeshttps://doi.org/10.1371/journal.pone.0202187openalex-snapshot
Phylogenetic analysis of the mitochondrial genomes in bees (Hymenoptera: Apoidea: Anthophila)
inferred← citeshttps://doi.org/10.1371/journal.pone.0294687openalex-snapshot
Adaptive evidence of mitochondrial genes in Pteromalidae and Eulophidae (Hymenoptera: Chalcidoidea)
inferred← citeshttps://doi.org/10.3390/insects12010029openalex-snapshot
Comparative Mitogenomic Analysis of Two Cuckoo Bees (Apoidea: Anthophila: Megachilidae) with Phylogenetic Implications
inferred← citeshttps://doi.org/10.7717/peerj.15865openalex-snapshot
The complete mitochondrial genome and gene rearrangements in a gall wasp species, Dryocosmus liui (Hymenoptera: Cynipoidea: Cynipidae)
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