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Mitogenome Phylogenetics: The Impact of Using Single Regions and Partitioning Schemes on Topology, Substitution Rate and Divergence Time Estimation

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/tpbi.2001.1568openalex-snapshot
The Probability of Topological Concordance of Gene Trees and Species Trees
inferredcites →https://doi.org/10.1007/978-0-387-21706-2openalex-snapshot
Modern Applied Statistics with S
inferredcites →https://doi.org/10.1007/s002390010197openalex-snapshot
The Cytochrome b Gene as a Phylogenetic Marker: The Limits of Resolution for Analyzing Relationships Among Cichlid Fishes
inferredcites →https://doi.org/10.1007/s00300-010-0871-3openalex-snapshot
Observations of a distinctive morphotype of killer whale (Orcinus orca), type D, from subantarctic waters
inferredcites →https://doi.org/10.1016/0169-5347(89)90006-2openalex-snapshot
Animal mitochondrial DNA as a genetic marker in population and evolutionary biology
inferredcites →https://doi.org/10.1016/j.anbehav.2009.01.018openalex-snapshot
The social dynamics of southern resident killer whales and conservation implications for this endangered population
inferredcites →https://doi.org/10.1016/j.tig.2009.09.005openalex-snapshot
High mitogenomic evolutionary rates and time dependency
inferredcites →https://doi.org/10.1016/j.ympev.2006.12.005openalex-snapshot
Patterns of evolution of mitochondrial cytochrome c oxidase I and II DNA and implications for DNA barcoding
inferredcites →https://doi.org/10.1016/j.ympev.2007.10.015openalex-snapshot
Molecular systematics of South American dolphins Sotalia: Sister taxa determination and phylogenetic relationships, with insights into a multi-locus phylogeny of the Delphinidae
inferredcites →https://doi.org/10.1016/j.ympev.2009.08.018openalex-snapshot
Divergence date estimation and a comprehensive molecular tree of extant cetaceans
inferredcites →https://doi.org/10.1016/j.ympev.2011.05.003openalex-snapshot
Toward the resolution of an explosive radiation—A multilocus phylogeny of oceanic dolphins (Delphinidae)
inferredcites →https://doi.org/10.1016/s0378-1119(99)00270-xopenalex-snapshot
Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system
inferredcites →https://doi.org/10.1073/pnas.0607004104openalex-snapshot
High-resolution species trees without concatenation
inferredcites →https://doi.org/10.1073/pnas.0802315105openalex-snapshot
Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes
inferredcites →https://doi.org/10.1073/pnas.90.17.8239openalex-snapshot
Abundant mitochondrial DNA variation and world-wide population structure in humpback whales.
inferredcites →https://doi.org/10.1080/10635150390235520openalex-snapshot
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
inferredcites →https://doi.org/10.1080/10635150590905939openalex-snapshot
Mitochondrial Phylogenetics and Evolution of Mysticete Whales
inferredcites →https://doi.org/10.1080/10635150701294733openalex-snapshot
How Many Genes Should a Systematist Sample? Conflicting Insights from a Phylogenomic Matrix Characterized by Replicated Incongruence
inferredcites →https://doi.org/10.1080/10635150701701091openalex-snapshot
Delimiting Species without Monophyletic Gene Trees
inferredcites →https://doi.org/10.1093/acprof:oso/9780199549429.003.0012openalex-snapshot
Improvement of molecular phylogenetic inference and the phylogeny of Bilateria
inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot
APE: Analyses of Phylogenetics and Evolution in R language
inferredcites →https://doi.org/10.1093/molbev/msi145openalex-snapshot
Time Dependency of Molecular Rate Estimates and Systematic Overestimation of Recent Divergence Times
inferredcites →https://doi.org/10.1093/molbev/msm063openalex-snapshot
Evolution of Population Structure in a Highly Social Top Predator, the Killer Whale
inferredcites →https://doi.org/10.1093/molbev/msn083openalex-snapshot
jModelTest: Phylogenetic Model Averaging
inferredcites →https://doi.org/10.1093/molbev/msp005openalex-snapshot
Temporal Trails of Natural Selection in Human Mitogenomes
inferredcites →https://doi.org/10.1093/molbev/msp169openalex-snapshot
Big and Slow: Phylogenetic Estimates of Molecular Evolution in Baleen Whales (Suborder Mysticeti)
inferredcites →https://doi.org/10.1093/molbev/msp274openalex-snapshot
Bayesian Inference of Species Trees from Multilocus Data
inferredcites →https://doi.org/10.1093/molbev/msr014openalex-snapshot
Evolution of Modern Birds Revealed by Mitogenomics: Timing the Radiation and Origin of Major Orders
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004170openalex-snapshot
Recombination or Mutational Hot Spots in Human mtDNA?
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025661openalex-snapshot
Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025875openalex-snapshot
A Comparative Summary of Genetic Distances in the Vertebrates from the Mitochondrial Cytochome b Gene
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot
Relationships between gene trees and species trees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040662openalex-snapshot
Evolution of the cetacean mitochondrial D-loop region.
inferredcites →https://doi.org/10.1093/sysbio/34.1.75openalex-snapshot
The Use of Tree Comparison Metrics
inferredcites →https://doi.org/10.1093/sysbio/syp060openalex-snapshot
Radiation of Extant Cetaceans Driven by Restructuring of the Oceans
inferredcites →https://doi.org/10.1098/rsbl.2003.0025openalex-snapshot
Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species
inferredcites →https://doi.org/10.1098/rsbl.2007.0063openalex-snapshot
Evaluating molecular clock calibrations using Bayesian analyses with soft and hard bounds
inferredcites →https://doi.org/10.1098/rsbl.2008.0168openalex-snapshot
Mitochondrial sequence divergence among Antarctic killer whale ecotypes is consistent with multiple species
inferredcites →https://doi.org/10.1098/rsbl.2010.0638openalex-snapshot
Positive selection on the killer whale mitogenome
inferredcites →https://doi.org/10.1098/rspb.2002.2033openalex-snapshot
Low worldwide genetic diversity in the killer whale (Orcinus orca): implications for demographic history
inferredcites →https://doi.org/10.1098/rstb.1986.0011openalex-snapshot
Mitochondrial DNA and the evolutionary genetics of higher animals
inferredcites →https://doi.org/10.1098/rstb.2007.2236openalex-snapshot
Improvement of molecular phylogenetic inference and the phylogeny of Bilateria
inferredcites →https://doi.org/10.1101/gr.102954.109openalex-snapshot
Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species.
inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04407.xopenalex-snapshot
Ecological, morphological and genetic divergence of sympatric North Atlantic killer whale populations
inferredcites →https://doi.org/10.1111/j.1420-9101.2009.01887.xopenalex-snapshot
Social cohesion among kin, gene flow without dispersal and the evolution of population genetic structure in the killer whale (Orcinus orca)
inferredcites →https://doi.org/10.1111/j.1558-5646.1995.tb02308.xopenalex-snapshot
INFERRING PHYLOGENIES FROM mt DNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES
inferredcites →https://doi.org/10.1111/j.1748-7692.2010.00460.xopenalex-snapshot
Evaluating the utility ofcox1for cetacean species identification
inferredcites →https://doi.org/10.1146/annurev.ecolsys.32.081501.114109openalex-snapshot
The Units of Selection on Mitochondrial DNA
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.002421openalex-snapshot
INTRASPECIFIC PHYLOGEOGRAPHY: The Mitochondrial DNA Bridge Between Population Genetics and Systematics
inferredcites →https://doi.org/10.1186/1471-2148-10-242openalex-snapshot
Performance of criteria for selecting evolutionary models in phylogenetics: a comprehensive study based on simulated datasets
inferredcites →https://doi.org/10.1186/1471-2148-11-65openalex-snapshot
Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae
inferredcites →https://doi.org/10.1186/1471-2148-7-214openalex-snapshot
BEAST: Bayesian evolutionary analysis by sampling trees
inferredcites →https://doi.org/10.1186/1471-2148-9-20openalex-snapshot
Seven new dolphin mitochondrial genomes and a time-calibrated phylogeny of whales
inferredcites →https://doi.org/10.1186/1471-2148-9-95openalex-snapshot
Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution
inferredcites →https://doi.org/10.1186/1471-2164-10-534openalex-snapshot
Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny
inferredcites →https://doi.org/10.1186/1471-2164-12-84openalex-snapshot
Potential efficacy of mitochondrial genes for animal DNA barcoding: a case study using eutherian mammals
inferredcites →https://doi.org/10.1186/1472-6785-11-10openalex-snapshot
Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore
inferredcites →https://doi.org/10.1186/1741-7007-8-114openalex-snapshot
Bayesian random local clocks, or one rate to rule them all
inferredcites →https://doi.org/10.1371/journal.pbio.0020354openalex-snapshot
DNA Barcoding: Promise and Pitfalls
inferredcites →https://doi.org/10.1371/journal.pbio.0040088openalex-snapshot
Relaxed Phylogenetics and Dating with Confidence
inferredcites →https://doi.org/10.1371/journal.pbio.0050207openalex-snapshot
Proboscidean Mitogenomics: Chronology and Mode of Elephant Evolution Using Mastodon as Outgroup
inferredcites →https://doi.org/10.1534/genetics.105.049593openalex-snapshot
The Concordance of Gene Trees and Species Trees at Two Linked Loci
inferredcites →https://doi.org/10.1534/genetics.109.112532openalex-snapshot
Unified Framework to Evaluate Panmixia and Migration Direction Among Multiple Sampling Locations
inferredcites →https://doi.org/10.15476/elte.2017.147openalex-snapshot
Bootstrap methods and their applications
inferredcites →https://doi.org/10.1644/06-mamm-a-118r1.1openalex-snapshot
A Dwarf Form of Killer Whale in Antarctica
inferredcites →https://doi.org/10.2307/2413347openalex-snapshot
The Use of Tree Comparison Metrics
inferredcites →https://doi.org/10.2307/2669707openalex-snapshot
Bootstrap Methods and Their Application
inferredcites →https://doi.org/10.3109/19401736.2010.494727openalex-snapshot
Improved characterisation of among-lineage rate variation in cetacean mitogenomes using codon-partitioned relaxed clocks
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.47536/jcrm.v5i2.813openalex-snapshot
Three forms of killer whales (Orcinus orca) in Antarctic waters

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Molecular Dating of Evolutionary Events
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Gene-Specific Substitution Rates for the Vespertilionidae (Chiroptera: Mammalia) Mitochondrial Genome, with the Description of Three new Mitogenomes
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Mitogenomic insights into a recently described and rarely observed killer whale morphotype
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Mitochondrial genomes from RNA-Seq reveal phylogeny and selection in Mepraia (Hemiptera: Reduviidae)
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First description of the complete mitochondrial genomes of the species Amblyomma humerale and Amblyomma geayi (Acari: Ixodidae), Amazon, Pará, Brazil
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Can Genetic Differences Explain Vocal Dialect Variation in Sperm Whales, Physeter macrocephalus?
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Examining the sensitivity of molecular species delimitations to the choice of mitochondrial marker
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Reply to Zijlstra (2025) - Status of Indo-Burmese pangolin (Manis indoburmanica)
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Evolutionary relationships of mitogenomes in a recently radiated Old World avian family
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inferred← citeshttps://doi.org/10.1016/j.gecco.2025.e03597openalex-snapshot
Population mitogenome diversity and connectivity among wild populations of Great Hornbill (Buceros bicornis) in Thailand: Implications for population recovery planning
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Evolutionary progression of mitochondrial gene rearrangements and phylogenetic relationships in Strigidae (Strigiformes)
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Improving the phylogenetic resolution of Malaysian and Javan mahseer (Cyprinidae), Tor tambroides and Tor tambra: Whole mitogenomes sequencing, phylogeny and potential mitogenome markers
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Mitogenomes reveal multiple evolutionary units and low genetic diversity of the critically endangered pancake tortoise Malacochersus tornieri
inferred← citeshttps://doi.org/10.1016/j.jasrep.2022.103338openalex-snapshot
A multidisciplinary study of Iberian Chalcolithic dogs
inferred← citeshttps://doi.org/10.1016/j.margen.2014.04.007openalex-snapshot
Sequence and comparison of mitochondrial genomes in the genus Nerita (Gastropoda: Neritimorpha: Neritidae) and phylogenetic considerations among gastropods
inferred← citeshttps://doi.org/10.1016/j.ygeno.2023.110771openalex-snapshot
A comprehensive phylogenomic study unveils evolutionary patterns and challenges in the mitochondrial genomes of Carcharhiniformes: A focus on Triakidae
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.06.002openalex-snapshot
Mitogenomic analyses from ancient DNA
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.06.010openalex-snapshot
Marine turtle mitogenome phylogenetics and evolution
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Using multiple relaxed-clock models to estimate evolutionary timescales from DNA sequence data
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Mitochondrial comparative genomics and phylogenetic signal assessment of mtDNA among arbuscular mycorrhizal fungi
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.01.002openalex-snapshot
Species delimitation of the North American orchard-spider Leucauge venusta (Walckenaer, 1841) (Araneae, Tetragnathidae)
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Mitochondrial phylogeny, divergence history and high-altitude adaptation of grassland caterpillars (Lepidoptera: Lymantriinae: Gynaephora) inhabiting the Tibetan Plateau
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The Microtus voles: Resolving the phylogeny of one of the most speciose mammalian genera using genomics
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Phylogenomic, morphological and acoustic data support a revised taxonomy of the lissodelphinine dolphin subfamily
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Hybridization between two high Arctic cetaceans confirmed by genomic analysis
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Can Mitogenomes of the Northern Wheatear (Oenanthe oenanthe) Reconstruct Its Phylogeography and Reveal the Origin of Migrant Birds?
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Whole mitochondrial genomes reveal the relatedness of the browsing ant incursions in Australia
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Omura's whale off West Africa: autochthonous population or inter-oceanic vagrant in the Atlantic Ocean?
inferred← citeshttps://doi.org/10.1080/17451000.2023.2194060openalex-snapshot
Phylogenetic placement and molecular dating of hammerhead sharks (Sphyrnidae) based on whole mitogenomes
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The complete mitochondrial genome of a parasitic flatworm Senga ophiocephalina (Cestoda: Bothriocephalidae)
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Characterization of the complete mitochondrial genome of Hermissenda emurai (Baba, 1937) (Nudibranchia, Facelinidae)
inferred← citeshttps://doi.org/10.1080/23802359.2019.1660276openalex-snapshot
Sequencing and analysis of the complete mitogenome of Doriprismatica atromarginata (Cuvier, 1804)
inferred← citeshttps://doi.org/10.1080/23802359.2021.1945971openalex-snapshot
Mitochondrial genome of bronze-winged jacana ( Metopidius indicus , Latham 1790)
inferred← citeshttps://doi.org/10.1080/23802359.2022.2107956openalex-snapshot
First mitochondrial genome of the Amazonian marsh rat Holochilus sciureus Wagner 1842 (Rodentia, Cricetidae, Sigmodontinae)
inferred← citeshttps://doi.org/10.1080/24701394.2018.1482283openalex-snapshot
Phylogenetic analysis of sooty grunter and other major freshwater fishes in the suborder Percoidei based on mitochondrial DNA
inferred← citeshttps://doi.org/10.1093/biolinnean/blae081openalex-snapshot
Mitogenomics of a declining species, the Rio Grande silvery minnow (Hybognathus amarus), with boom–bust population dynamics
inferred← citeshttps://doi.org/10.1093/biolinnean/blaf054openalex-snapshot
Remarkable genetic and specific diversification in Boeckella (Copepoda: Calanoida) from New Caledonia suggests strong micro-endemism
inferred← citeshttps://doi.org/10.1093/cz/zoad048openalex-snapshot
Mitogenomics clarifies the position of the Nearctic magpies (Pica hudsonia and Pica nuttalli) within the Holarctic magpie radiation
inferred← citeshttps://doi.org/10.1093/evolut/qpaf233openalex-snapshot
Digest: Linking life-history evolution and substitution rates in extreme environments
inferred← citeshttps://doi.org/10.1093/gbe/evs126openalex-snapshot
Low Diversity in the Mitogenome of Sperm Whales Revealed by Next-Generation Sequencing
inferred← citeshttps://doi.org/10.1093/gbe/evw184openalex-snapshot
Multiple Lines of Evidence from Mitochondrial Genomes Resolve Phylogenetic Relationships of Parasitic Wasps in Braconidae
inferred← citeshttps://doi.org/10.1093/gbe/evz209openalex-snapshot
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inferred← citeshttps://doi.org/10.1093/jhered/esad049openalex-snapshot
Guidelines and quantitative standards for improved cetacean taxonomy using full mitochondrial genomes
inferred← citeshttps://doi.org/10.1093/jmammal/gyae090openalex-snapshot
Genomics of historical museum collections clarifies species diversity in Cuban hutias (Capromys)
inferred← citeshttps://doi.org/10.1093/molbev/msw261openalex-snapshot
Mitogenomic phylogeny, diversification, and biogeography of South American spiny rats
inferred← citeshttps://doi.org/10.1093/sysbio/syae010openalex-snapshot
Phylogenomics of Neogastropoda: The Backbone Hidden in the Bush
inferred← citeshttps://doi.org/10.1093/ve/veac012openalex-snapshot
The evolutionary dynamics and epidemiological history of hepatitis C virus genotype 6, including unique strains from the Li community of Hainan Island, China
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlab045openalex-snapshot
Evolutionary history of Sundaland shrews (Eulipotyphla: Soricidae:Crocidura) with a focus on Borneo
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlac060openalex-snapshot
Mitogenomes resolve the phylogeography and divergence times within the endemic New Zealand Callaeidae (Aves: Passerida)
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlad108openalex-snapshot
Integrative revision of species limits in the genus Schiffornis (Aves: Tityridae) reveals cryptic diversity in the Neotropics
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlx034openalex-snapshot
Phylogenetic position of the extinct blue antelope, Hippotragus leucophaeus (Pallas, 1766) (Bovidae: Hippotraginae), based on complete mitochondrial genomes
inferred← citeshttps://doi.org/10.1098/rsbl.2025.0222openalex-snapshot
Uncovering new lineages in the Sunda pangolin ( Manis javanica ) with museum mitogenomics
inferred← citeshttps://doi.org/10.1098/rsos.191137openalex-snapshot
Preserved collagen reveals species identity in archaeological marine turtle bones from Caribbean and Florida sites
inferred← citeshttps://doi.org/10.1098/rspb.2013.1481openalex-snapshot
Tracking niche variation over millennial timescales in sympatric killer whale lineages
inferred← citeshttps://doi.org/10.1098/rstb.2015.0332openalex-snapshot
Barcoding the largest animals on Earth: ongoing challenges and molecular solutions in the taxonomic identification of ancient cetaceans
inferred← citeshttps://doi.org/10.1101/2025.08.19.671050openalex-snapshot
Impact of Partition Models on Phylogenetic Inference and Divergence Times of Lampyridae from Mitochondrial Genomes
inferred← citeshttps://doi.org/10.1101/851469openalex-snapshot
Evolutionary history of the porpoises ( Phocoenidae ) across the speciation continuum: a mitogenome phylogeographic perspective
inferred← citeshttps://doi.org/10.1111/1755-0998.12059openalex-snapshot
Targeted multiplex next‐generation sequencing: advances in techniques of mitochondrial and nuclear DNA sequencing for population genomics
inferred← citeshttps://doi.org/10.1111/1755-0998.12448openalex-snapshot
In‐solution hybridization for mammalian mitogenome enrichment: pros, cons and challenges associated with multiplexing degraded DNA
inferred← citeshttps://doi.org/10.1111/1755-0998.12699openalex-snapshot
Whole mitochondrial genome capture from faecal samples and museum‐preserved specimens
inferred← citeshttps://doi.org/10.1111/bij.12627openalex-snapshot
The complete mitochondrial genome of the endemic and highly specialized South African bee speciesRediviva intermixta(Hymenoptera: Melittidae), with a comparison with other bee mitogenomes
inferred← citeshttps://doi.org/10.1111/j.1469-185x.2012.00239.xopenalex-snapshot
Killer whale ecotypes: is there a global model?
inferred← citeshttps://doi.org/10.1111/jbi.14598openalex-snapshot
Evolutionary history and patterns of divergence in three tropical east Asian squirrels across the Isthmus of Kra
inferred← citeshttps://doi.org/10.1111/jeb.13070openalex-snapshot
Phylogenetic relationships and divergence dates of softshell turtles (Testudines: Trionychidae) inferred from complete mitochondrial genomes
inferred← citeshttps://doi.org/10.1111/jfb.15765openalex-snapshot
An integrative approach highlights the discrepancy in the genetic, phenotypic, and presumptive taxonomic structure of Phoxinus (Actinopterygii, Leuciscidae, Phoxininae) in Bulgaria
inferred← citeshttps://doi.org/10.1111/jzs.12255openalex-snapshot
New insights into the phylogenetic relationships among the oceanic dolphins (Cetacea: Delphinidae)
inferred← citeshttps://doi.org/10.1111/jzs.12440openalex-snapshot
Mitogenomics of Didelphis (Mammalia; Didelphimorphia; Didelphidae) and insights into character evolution in the genus
inferred← citeshttps://doi.org/10.1111/mms.12051openalex-snapshot
How to contend with paraphyly in the taxonomy of the delphinine cetaceans?
inferred← citeshttps://doi.org/10.1111/mms.12345openalex-snapshot
Genetic structure of the beaked whale genus Berardius in the North Pacific, with genetic evidence for a new species
inferred← citeshttps://doi.org/10.1111/mms.12409openalex-snapshot
Analytical approaches to subspecies delimitation with genetic data
inferred← citeshttps://doi.org/10.1111/mms.12411openalex-snapshot
Guidelines and quantitative standards to improve consistency in cetacean subspecies and species delimitation relying on molecular genetic data
inferred← citeshttps://doi.org/10.1111/mms.12545openalex-snapshot
Mitogenomic differentiation in spinner ( Stenella longirostris ) and pantropical spotted dolphins ( S. attenuata ) from the eastern tropical Pacific Ocean
inferred← citeshttps://doi.org/10.1111/mms.12894openalex-snapshot
Misuse of molecular tools results in misleading dates for the ancestor of the Indo‐Pacific humpback dolphin
inferred← citeshttps://doi.org/10.1111/mms.70107openalex-snapshot
Whole Mitochondrial Genome Analysis of Killer Whales Reveals the Presence of Resident and Transient Ecotypes Around Hokkaido
inferred← citeshttps://doi.org/10.1111/syen.12670openalex-snapshot
A comparison of phylogenomic inference pipelines for low‐coverage whole‐genome sequencing in Formica ants
inferred← citeshttps://doi.org/10.11144/javeriana.sc23-3.ccclopenalex-snapshot
Complete mitochondrial genome of the nesting Colombian Caribbean loggerhead turtle: first approach of tRNAs and phylogenetic analysis
inferred← citeshttps://doi.org/10.1134/s1062359024610024openalex-snapshot
A Comparative Analysis of Complete Mitochondrial Genomes of Two Tyulka Clupeonella Kessler, 1877 (Actinopterygii: Clupeidae) Species Allowed to Clarify Their Evolutionary History in the Ponto-Сaspian Region
inferred← citeshttps://doi.org/10.1146/annurev-ento-011118-111856openalex-snapshot
Systematics, Phylogeny, and Evolution of Braconid Wasps: 30 Years of Progress
inferred← citeshttps://doi.org/10.1155/2024/2174469openalex-snapshot
Mitogenomic Characterization of South African Leopards and the Effect of Past Climatic Events
inferred← citeshttps://doi.org/10.1163/15685381-bja10138openalex-snapshot
Phylogenetic analysis of the critically endangered Karpathos water frog (Anura, Amphibia): conservation insights from complete mitochondrial genome sequencing
inferred← citeshttps://doi.org/10.1186/s12862-016-0654-8openalex-snapshot
Merging scleractinian genera: the overwhelming genetic similarity between solitary Desmophyllum and colonial Lophelia
inferred← citeshttps://doi.org/10.1186/s12862-017-1012-1openalex-snapshot
The influence of molecular markers and methods on inferring the phylogenetic relationships between the representatives of the Arini (parrots, Psittaciformes), determined on the basis of their complete mitochondrial genomes
inferred← citeshttps://doi.org/10.1186/s12862-021-01926-2openalex-snapshot
Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.1186/s12862-022-02085-8openalex-snapshot
Complete mitochondrial genomes and updated divergence time of the two freshwater clupeids endemic to Lake Tanganyika (Africa) suggest intralacustrine speciation
inferred← citeshttps://doi.org/10.1186/s12862-026-02520-0openalex-snapshot
Comparative mitogenomics of freshwater snails of the genus Biomphalaria (Gastropoda: Planorbidae) and new insights into mitochondrial genome evolution in Hygrophila
inferred← citeshttps://doi.org/10.1186/s12864-017-4237-xopenalex-snapshot
The complete mitochondrial genome of parasitic nematode Camallanus cotti: extreme discontinuity in the rate of mitogenomic architecture evolution within the Chromadorea class
inferred← citeshttps://doi.org/10.1186/s12864-020-06846-xopenalex-snapshot
Intra-specific comparison of mitochondrial genomes reveals host gene fragment exchange via intron mobility in Tremella fuciformis
inferred← citeshttps://doi.org/10.1186/s12864-025-11391-6openalex-snapshot
Mitogenomic phylogeny and divergence time estimation of Artemia Leach, 1819 (Branchiopoda: Anostraca) with emphasis on parthenogenetic lineages
inferred← citeshttps://doi.org/10.1186/s12864-025-11980-5openalex-snapshot
Comparative mitogenomics reveals evolutionary drivers of Strongyloidea nematodes dwelling in gastrointestinal tract
inferred← citeshttps://doi.org/10.1186/s12870-018-1558-0openalex-snapshot
Sequencing of organellar genomes of Gymnomitrion concinnatum (Jungermanniales) revealed the first exception in the structure and gene order of evolutionary stable liverworts mitogenomes
inferred← citeshttps://doi.org/10.12794/metadc849620openalex-snapshot
Genetic Characterization of Central and South American Populations of Scarlet Macaw (Ara macao)
inferred← citeshttps://doi.org/10.12933/therya-23-2243openalex-snapshot
An 1896 specimen helps clarify the phylogenetic placement of the Mexican endemic Hooper’s deer mouse
inferred← citeshttps://doi.org/10.1371/annotation/020848d7-0453-42df-bf94-40eb39f1b27aopenalex-snapshot
Correction: Conveniently Pre-Tagged and Pre-Packaged: Extended Molecular Identification and Metagenomics Using Complete Metazoan Mitochondrial Genomes
inferred← citeshttps://doi.org/10.1371/journal.pone.0051263openalex-snapshot
Conveniently Pre-Tagged and Pre-Packaged: Extended Molecular Identification and Metagenomics Using Complete Metazoan Mitochondrial Genomes
inferred← citeshttps://doi.org/10.1371/journal.pone.0055816openalex-snapshot
Improving Evolutionary Models for Mitochondrial Protein Data with Site-Class Specific Amino Acid Exchangeability Matrices
inferred← citeshttps://doi.org/10.1371/journal.pone.0063396openalex-snapshot
Mitogenomic Phylogenetics of Fin Whales (Balaenoptera physalus spp.): Genetic Evidence for Revision of Subspecies
inferred← citeshttps://doi.org/10.1371/journal.pone.0069504openalex-snapshot
A Mitogenomic Phylogeny of Living Primates
inferred← citeshttps://doi.org/10.1371/journal.pone.0084080openalex-snapshot
Performance of Single and Concatenated Sets of Mitochondrial Genes at Inferring Metazoan Relationships Relative to Full Mitogenome Data
inferred← citeshttps://doi.org/10.1371/journal.pone.0090061openalex-snapshot
Influence of Introgression and Geological Processes on Phylogenetic Relationships of Western North American Mountain Suckers (Pantosteus, Catostomidae)
inferred← citeshttps://doi.org/10.1371/journal.pone.0106267openalex-snapshot
Effects of Mitochondrial DNA Rate Variation on Reconstruction of Pleistocene Demographic History in a Social Avian Species, Pomatostomus superciliosus
inferred← citeshttps://doi.org/10.1371/journal.pone.0123543openalex-snapshot
Initial Evidence for Adaptive Selection on the NADH Subunit Two of Freshwater Dolphins by Analyses of Mitochondrial Genomes
inferred← citeshttps://doi.org/10.1371/journal.pone.0130673openalex-snapshot
Complete Taiwanese Macaque (Macaca cyclopis) Mitochondrial Genome: Reference-Assisted de novo Assembly with Multiple k-mer Strategy
inferred← citeshttps://doi.org/10.1371/journal.pone.0140251openalex-snapshot
Molecular and Morphological Differentiation of Common Dolphins (Delphinus sp.) in the Southwestern Atlantic: Testing the Two Species Hypothesis in Sympatry
inferred← citeshttps://doi.org/10.1371/journal.pone.0145354openalex-snapshot
Correction: Molecular and Morphological Differentiation of Common Dolphins (Delphinus sp.) in the Southwestern Atlantic: Testing the Two Species Hypothesis in Sympatry
inferred← citeshttps://doi.org/10.1371/journal.pone.0158129openalex-snapshot
Back to Water: Signature of Adaptive Evolution in Cetacean Mitochondrial tRNAs
inferred← citeshttps://doi.org/10.1371/journal.pone.0179971openalex-snapshot
Mitogenome sequence accuracy using different elucidation methods
inferred← citeshttps://doi.org/10.1371/journal.pone.0220676openalex-snapshot
What does mitogenomics tell us about the evolutionary history of the Drosophila buzzatii cluster (repleta group)?
inferred← citeshttps://doi.org/10.1371/journal.pone.0323354openalex-snapshot
Revised phylogeny of mouflon based on expanded sampling of mitogenomes
inferred← citeshttps://doi.org/10.14264/uql.2020.482openalex-snapshot
The global biology, ecology and phylogenetic status of black marlin (Istiompax indica)
inferred← citeshttps://doi.org/10.1643/h2020123openalex-snapshot
A New Species of Sphaerodactylus (Gekkota: Sphaerodactylidae) from the Northwest Limestone Region of Puerto Rico
inferred← citeshttps://doi.org/10.21157/j.ked.hewan.v10i1.3357openalex-snapshot
KAJIAN MOLEKULER LUMBA-LUMBA HIDUNG BOTOL (Tursiops sp.) ASAL LAUT JAWA BERDASAR URUTAN GEN CYTOCHROME C OXIDASE SUB-UNIT II (COX II) (Molecular Studies of Bottlenose Dolphins (Tursiops sp.) from Java Sea by Gene Sequences of Cytochrome C Oxidase Sub-Unit II (COX II))
inferred← citeshttps://doi.org/10.21203/rs.2.16176/v1openalex-snapshot
Complete mitochondrial DNA sequence analysis of Bluespotted seabream, Pagrus caeruleostictus (Perciformes: Sparidae)
inferred← citeshttps://doi.org/10.21203/rs.2.16176/v2openalex-snapshot
Complete mitochondrial DNA sequence analysis of Bluespotted seabream, Pagrus caeruleostictus (Perciformes: Sparidae)
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1877994/v1openalex-snapshot
Complete mitochondrial genomes and updated divergence time of the two freshwater clupeids endemic to Lake Tanganyika (Africa) suggest intralacustrine speciation
inferred← citeshttps://doi.org/10.24272/j.issn.2095-8137.2021.199openalex-snapshot
Mitogenome and phylogenetic analyses support rapid diversification among species groups of small-eared shrews genus Cryptotis (Mammalia: Eulipotyphla: Soricidae)
inferred← citeshttps://doi.org/10.2989/1814232x.2016.1238410openalex-snapshot
Phylogeography of the pelagic fish Seriola lalandi at different scales: confirmation of inter-ocean population structure and evaluation of southern African genetic diversity
inferred← citeshttps://doi.org/10.3109/19401736.2015.1101536openalex-snapshot
Molecular systematics of the freshwater stingrays (myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribbean, and Maracaibo basins (Colombia – Venezuela): evidence from three mitochondrial genes
inferred← citeshttps://doi.org/10.3354/esr01278openalex-snapshot
Key issues in assessing threats to sea turtles: knowledge gaps and future directions
inferred← citeshttps://doi.org/10.3389/fbinf.2025.1704212openalex-snapshot
Assessment of phylogenetic informativeness in mitochondrial and nuclear genes for mammalian systematics using sparse learning
inferred← citeshttps://doi.org/10.3389/fevo.2020.00208openalex-snapshot
Ancient Divergence Driven by Geographic Isolation and Ecological Adaptation in Forest Dependent Sundaland Tree Squirrels
inferred← citeshttps://doi.org/10.3389/fgene.2021.685806openalex-snapshot
Extension of Mitogenome Enrichment Based on Single Long-Range PCR: mtDNAs and Putative Mitochondrial-Derived Peptides of Five Rodent Hibernators
inferred← citeshttps://doi.org/10.3389/fmars.2024.1460314openalex-snapshot
Killer whales in the Gulf of Mexico and North Atlantic off the Southeastern United States
inferred← citeshttps://doi.org/10.3390/genes12111772openalex-snapshot
Sequencing of the Complete Mitochondrial Genome of Pingus sinensis (Spirurina: Quimperiidae): Gene Arrangements and Phylogenetic Implications
inferred← citeshttps://doi.org/10.3390/genes13010125openalex-snapshot
Characterisation of the Complete Mitochondrial Genome of Critically Endangered Mustela lutreola (Carnivora: Mustelidae) and Its Phylogenetic and Conservation Implications
inferred← citeshttps://doi.org/10.3390/genes15060742openalex-snapshot
Mitogenomic Insights into the Evolution, Divergence Time, and Ancestral Ranges of Coturnix Quails
inferred← citeshttps://doi.org/10.3390/genes16080977openalex-snapshot
The Complete Mitochondrial Genome of Liobagrus huaiheensis (Teleostei: Siluriformes: Amblycipitidae): Characterization, Phylogenetic Placement, and Insights into Genetic Diversity
inferred← citeshttps://doi.org/10.3390/genes17040372openalex-snapshot
Extensive Mitogenomic Remodeling Delineates the Family-Level Split in Velvet Worms
inferred← citeshttps://doi.org/10.3390/pathogens14030234openalex-snapshot
High-Throughput Sequencing Enables Rapid Analyses of Nematode Mitochondrial Genomes from an Environmental Sample
inferred← citeshttps://doi.org/10.35407/bag.2018.29.02.01openalex-snapshot
ÉTICA EN LAS PUBLICACIONES CIENTÍFICAS
inferred← citeshttps://doi.org/10.35407/bag.2018.29.02.03openalex-snapshot
NEW MITOCHONDRIAL MARKERS IMPROVE THE PHYLOGENY OF THE HAWKSBILL TURTLE Eretmochelys imbricata (TESTUDINES: CHELONIIDAE)
inferred← citeshttps://doi.org/10.4137/ebo.s22340openalex-snapshot
MITOSCISSOR: A Useful Tool for Auto-Assembly of Mitogenomic Datasets in the Evolutionary Analysis of Fishes
inferred← citeshttps://doi.org/10.4172/2167-6801.1000115openalex-snapshot
HVR1-Derived Numts and the Reliability of Phylogenetic Studies in Chimpanzees (Pan troglodytes)
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928439openalex-snapshot
Additional file 1 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928442openalex-snapshot
Additional file 2 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928448openalex-snapshot
Additional file 3 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928451openalex-snapshot
Additional file 4 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928454openalex-snapshot
Additional file 5 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928460openalex-snapshot
Additional file 6 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928463openalex-snapshot
Additional file 7 of Complete mitochondrial genomes reveal robust phylogenetic signals and evidence of positive selection in horseshoe bats
inferred← citeshttps://doi.org/10.70675/47ccc132zb8acz493az8b90z9ac335fc5d04openalex-snapshot
La diversité biologique en Nouvelle-Calédonie-Kanaky : caractérisation à partir des crustacés dulçaquicoles, recherche des facteurs explicatifs majeurs et pérennisation des connaissances pour leur (ré-)utilisation
inferred← citeshttps://doi.org/10.7150/ijbs.12148openalex-snapshot
Phylogenetic inference of calyptrates, with the first mitogenomes for Gasterophilinae (Diptera: Oestridae) and Paramacronychiinae (Diptera: Sarcophagidae)
inferred← citeshttps://doi.org/10.7287/peerj.16047v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion (Zalophus wollebaeki) from scat DNA (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.16047v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion (Zalophus wollebaeki) from scat DNA (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.16047v0.1/reviews/3openalex-snapshot
Peer Review #3 of "Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion (Zalophus wollebaeki) from scat DNA (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.16047v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion (Zalophus wollebaeki) from scat DNA (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.16047v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion (Zalophus wollebaeki) from scat DNA (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.16047v0.2/reviews/3openalex-snapshot
Peer Review #3 of "Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion (Zalophus wollebaeki) from scat DNA (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.3661v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Comparative mitogenomic analysis of mirid bugs (Hemiptera: Miridae) and evaluation of potential DNA barcoding markers (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.3661v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Comparative mitogenomic analysis of mirid bugs (Hemiptera: Miridae) and evaluation of potential DNA barcoding markers (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.3661v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Comparative mitogenomic analysis of mirid bugs (Hemiptera: Miridae) and evaluation of potential DNA barcoding markers (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.3661v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Comparative mitogenomic analysis of mirid bugs (Hemiptera: Miridae) and evaluation of potential DNA barcoding markers (v0.2)"
inferred← citeshttps://doi.org/10.7717/peerj.16047openalex-snapshot
Time-calibrated phylogeny and full mitogenome sequence of the Galapagos sea lion ( Zalophus wollebaeki ) from scat DNA
inferred← citeshttps://doi.org/10.7717/peerj.17076openalex-snapshot
The efficacy of single mitochondrial genes at reconciling the complete mitogenome phylogeny—a case study on dwarf chameleons
inferred← citeshttps://doi.org/10.7717/peerj.3661openalex-snapshot
Comparative mitogenomic analysis of mirid bugs (Hemiptera: Miridae) and evaluation of potential DNA barcoding markers
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.