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Fungal infection alters the selection, dispersal and drift processes structuring the amphibian skin microbiome

https://doi.org/10.1111/ele.13414
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Modeling Taxa-Abundance Distributions in Microbial Communities using Environmental Sequence Data
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The zero-sum assumption in neutral biodiversity theory
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A sampling formula for ecological communities with multiple dispersal syndromes
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Beyond neutral science
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Maximum information entropy: a foundation for ecological theory
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Relative roles of niche and neutral processes in structuring a soil microbial community
inferredcites →https://doi.org/10.1038/ismej.2009.27openalex-snapshot
Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus
inferredcites →https://doi.org/10.1038/ismej.2010.207openalex-snapshot
Species sorting and neutral processes are both important during the initial assembly of bacterial communities
inferredcites →https://doi.org/10.1038/ismej.2012.22openalex-snapshot
Stochastic and deterministic assembly processes in subsurface microbial communities
inferredcites →https://doi.org/10.1038/ismej.2013.11openalex-snapshot
Changes in assembly processes in soil bacterial communities following a wildfire disturbance
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Quantifying community assembly processes and identifying features that impose them
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Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development
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Emerging fungal threats to animal, plant and ecosystem health
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Beyond biogeographic patterns: processes shaping the microbial landscape
inferredcites →https://doi.org/10.1038/s41467-018-02967-wopenalex-snapshot
Amphibian chytridiomycosis outbreak dynamics are linked with host skin bacterial community structure
inferredcites →https://doi.org/10.1073/pnas.0704350104openalex-snapshot
Drought mediates the importance of stochastic community assembly
inferredcites →https://doi.org/10.1073/pnas.0914111107openalex-snapshot
Dynamics of an emerging disease drive large-scale amphibian population extinctions
inferredcites →https://doi.org/10.1073/pnas.1000604107openalex-snapshot
Combined niche and neutral effects in a microbial wastewater treatment community
inferredcites →https://doi.org/10.1073/pnas.1412752111openalex-snapshot
The pathogen Batrachochytrium dendrobatidis disturbs the frog skin microbiome during a natural epidemic and experimental infection
inferredcites →https://doi.org/10.1073/pnas.1808118115openalex-snapshot
Neutral and selective dynamics in a synthetic microbial community
inferredcites →https://doi.org/10.1080/00031305.2018.1549100openalex-snapshot
R-squared for Bayesian Regression Models
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Conceptual Synthesis in Community Ecology
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Epidemic and endemic pathogen dynamics correspond to distinct host population microbiomes at a landscape scale
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Linking Statistical and Ecological Theory: Hubbell's Unified Neutral Theory of Biodiversity as a Hierarchical Dirichlet Process
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Both species sorting and neutral processes drive assembly of bacterial communities in aquatic microcosms
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A general sampling formula for community structure data
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The metacommunity concept: a framework for multi‐scale community ecology
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A new sampling formula for neutral biodiversity
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A niche for neutrality
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A neutral sampling formula for multiple samples and an ‘exact’ test of neutrality
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The merging of community ecology and phylogenetic biology
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Opposing effects of competitive exclusion on the phylogenetic structure of communities
inferredcites →https://doi.org/10.1111/j.1462-2920.2005.00956.xopenalex-snapshot
Quantifying the roles of immigration and chance in shaping prokaryote community structure
inferredcites →https://doi.org/10.1111/j.1469-1795.2010.00407.xopenalex-snapshot
Host species determines whether infection load increases beyond disease‐causing thresholds following exposure to the amphibian chytrid fungus
inferredcites →https://doi.org/10.1111/j.1758-2229.2011.00257.xopenalex-snapshot
Local and regional factors influencing bacterial community assembly
inferredcites →https://doi.org/10.1111/mec.12510openalex-snapshot
The amphibian skin‐associated microbiome across species, space and life history stages
inferredcites →https://doi.org/10.1111/oik.01493openalex-snapshot
Assessing the relative importance of neutral stochasticity in ecological communities
inferredcites →https://doi.org/10.1126/science.aav0379openalex-snapshot
Amphibian fungal panzootic causes catastrophic and ongoing loss of biodiversity
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/mmbr.00002-17openalex-snapshot
Stochastic Community Assembly: Does It Matter in Microbial Ecology?
inferredcites →https://doi.org/10.1128/mmbr.00051-12openalex-snapshot
Patterns and Processes of Microbial Community Assembly
inferredcites →https://doi.org/10.1146/annurev.ecolsys.33.010802.150448openalex-snapshot
Phylogenies and Community Ecology
inferredcites →https://doi.org/10.1186/s40168-018-0496-2openalex-snapshot
Signatures of ecological processes in microbial community time series
inferredcites →https://doi.org/10.1371/journal.pone.0010957openalex-snapshot
Cutaneous Bacteria of the Redback Salamander Prevent Morbidity Associated with a Lethal Disease
inferredcites →https://doi.org/10.1371/journal.pone.0227285openalex-snapshot
Quantitative PCR provides a simple and accessible method for quantitative microbiota profiling
inferredcites →https://doi.org/10.1515/9781400883790openalex-snapshot
The Theory of Ecological Communities (MPB-57)
inferredcites →https://doi.org/10.18637/jss.v076.i01openalex-snapshot
Stan : A Probabilistic Programming Language
inferredcites →https://doi.org/10.1890/14-1837.1openalex-snapshot
Antifungal isolates database of amphibian skin‐associated bacteria and function against emerging fungal pathogens
inferredcites →https://doi.org/10.2307/1930989openalex-snapshot
The Commonness, And Rarity, of Species
inferredcites →https://doi.org/10.2307/1939377openalex-snapshot
Competition and Biodiversity in Spatially Structured Habitats
inferredcites →https://doi.org/10.3354/dao02429openalex-snapshot
Treatment of amphibians infected with chytrid fungus: learning from failed trials with itraconazole, antimicrobial peptides, bacteria, and heat therapy
inferredcites →https://doi.org/10.3389/fmicb.2016.00333openalex-snapshot
Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin
inferredcites →https://doi.org/10.3389/fmicb.2018.00487openalex-snapshot
Host and Aquatic Environment Shape the Amphibian Skin Microbiome but Effects on Downstream Resistance to the Pathogen Batrachochytrium dendrobatidis Are Variable

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4684166openalex-extracted
Comparative Profiling of the Skin and Gut Microbiota During Metamorphosis in Chinese Spiny Frogs ( Quasipaa Spinosa) Highlights Microbial Communities Involved in Disease Pathogenesis
inferred← citeshttps://doi.org/10.1002/ecs2.70699openalex-snapshot
Microbial metacommunity ecology: Using null models and networks to understand assembly in a salamander disease system
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.740726openalex-snapshot
Comparative profiling of the skin and gut microbiota during metamorphosis in Chinese spiny frogs (Quasipaa spinosa) highlights microbial communities involved in disease pathogenesis
inferred← citeshttps://doi.org/10.1016/j.isci.2025.113661openalex-snapshot
Associations between skin bacteria and chytrid fungal infection in Asian amphibians
inferred← citeshttps://doi.org/10.1038/s41396-020-00875-wopenalex-snapshot
The amphibian microbiome exhibits poor resilience following pathogen-induced disturbance
inferred← citeshttps://doi.org/10.1038/s41598-021-91118-1openalex-snapshot
The presence of Pseudogymnoascus destructans, a fungal pathogen of bats, correlates with changes in microbial metacommunity structure
inferred← citeshttps://doi.org/10.1093/femsec/fiab030openalex-snapshot
Co-infecting pathogen lineages have additive effects on host bacterial communities
inferred← citeshttps://doi.org/10.1093/femsre/fuad002openalex-snapshot
From the organismal to biosphere levels: environmental impacts on the amphibian microbiota
inferred← citeshttps://doi.org/10.1093/ismeco/ycag016openalex-snapshot
The fungal pathogen Batrachochytrium dendrobatidis drives the relationship between environmental and amphibian skin microbiota
inferred← citeshttps://doi.org/10.1101/2020.07.19.211102openalex-snapshot
Evaluation of the bacterial and fungal microbiome on the skin of Anaxyrus boreas , Rhinella marina , and Xenopus laevis and implications related to Batrachochytrium dendrobatidis susceptibility
inferred← citeshttps://doi.org/10.1101/2021.07.20.453099openalex-snapshot
Priority effects among amphibian microbes lead to varying levels of Bd infection
inferred← citeshttps://doi.org/10.1111/cobi.14411openalex-snapshot
Effects of snake fungal disease (ophidiomycosis) on the skin microbiome across two major experimental scales
inferred← citeshttps://doi.org/10.1111/mec.17051openalex-snapshot
Seasonal assembly of skin microbiota driven by neutral and selective processes in the greater horseshoe bat
inferred← citeshttps://doi.org/10.1111/mec.17741openalex-snapshot
Blurred Lines Between Determinism and Stochasticity in an Amphibian Phylosymbiosis Under Pathogen Infection
inferred← citeshttps://doi.org/10.3389/fmicb.2021.664271openalex-snapshot
Endophytic Microbes Are Tools to Increase Tolerance in Jasione Plants Against Arsenic Stress
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1458258openalex-snapshot
Structure and assembly process of skin fungal communities among bat species in northern China
inferred← citeshttps://doi.org/10.3389/frmbi.2024.1277645openalex-snapshot
Family shapes microbiome differences in Oklahoma salamanders
inferred← citeshttps://doi.org/10.70675/b6c93f38z5c3ez4ff7za0a1z7d91c3010f33openalex-snapshot
Le microbiome de la peau des amphibiens dans la pyramide des maladies
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