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qPCR screening for Yersinia ruckeri clonal complex 1 against a background of putatively avirulent strains in Norwegian aquaculture

https://doi.org/10.1111/jfd.13656
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00253-012-4328-1openalex-snapshot
Highly sensitive detection and quantification of the pathogen Yersinia ruckeri in fish tissues by using real-time PCR
inferredcites →https://doi.org/10.1016/0044-8486(89)90146-4openalex-snapshot
Immunity in Atlantic salmon, Salmo salar L., fry following vaccination against Yersinia ruckeri, and the influence of body weight and infectious pancreatic necrosis virus (IPNV) on the detection of carriers
inferredcites →https://doi.org/10.1016/0378-1135(90)90016-oopenalex-snapshot
O-serotyping of Yersinia ruckeri with special emphasis on European isolates
inferredcites →https://doi.org/10.1016/j.mimet.2020.106044openalex-snapshot
Multiplex droplet digital PCR assay for detection of Flavobacterium psychrophilum and Yersinia ruckeri in Norwegian aquaculture
inferredcites →https://doi.org/10.1016/j.vas.2019.100076openalex-snapshot
Sudden exposure to warm water causes instant behavioural responses indicative of nociception or pain in Atlantic salmon
inferredcites →https://doi.org/10.1016/s0723-2020(11)80002-0openalex-snapshot
Starvation-Survival Processes of the Bacterial Fish Pathogen Yersinia ruckeri
inferredcites →https://doi.org/10.1016/s0723-2020(11)80274-2openalex-snapshot
Antigenic and Molecular Characterization of Yersinia ruckeri Proposal for a New Intraspecies Classification
inferredcites →https://doi.org/10.1016/s0927-7765(02)00023-1openalex-snapshot
Adhesion of Yersinia ruckeri to fish farm materials: influence of cell and material surface properties
inferredcites →https://doi.org/10.1038/s41598-019-47976-xopenalex-snapshot
Development of a viability digital PCR protocol for the selective detection and quantification of live Erwinia amylovora cells in cankers
inferredcites →https://doi.org/10.1046/j.1365-2761.2001.00261.xopenalex-snapshot
Rapid identification of Yersinia ruckeri by PCR amplification of yruI–yruR quorum sensing
inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1098/rspb.2020.2010openalex-snapshot
Environmental DNA from multiple pathogens is elevated near active Atlantic salmon farms
inferredcites →https://doi.org/10.1099/mgen.0.000095openalex-snapshot
Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selection
inferredcites →https://doi.org/10.1111/1365-2664.13404openalex-snapshot
Monitoring a Norwegian freshwater crayfish tragedy: eDNA snapshots of invasion, infection and extinction
inferredcites →https://doi.org/10.1111/1462-2920.15051openalex-snapshot
The inverse autotransporters of Yersinia ruckeri , YrInv and YrIlm , contribute to biofilm formation and virulence
inferredcites →https://doi.org/10.1111/j.1348-0421.2007.tb03966.xopenalex-snapshot
Photoactivated Ethidium Monoazide Directly Cleaves Bacterial DNA and Is Applied to PCR for Discrimination of Live and Dead Bacteria
inferredcites →https://doi.org/10.1111/j.1365-2672.2004.02342.xopenalex-snapshot
Retention and removal of the fish pathogenic bacterium Yersinia ruckeri in biological sand filters
inferredcites →https://doi.org/10.1111/j.1365-2761.1982.tb00487.xopenalex-snapshot
A serotypic survey and cross‐protection test of North American field isolates of Yersinia ruckeri
inferredcites →https://doi.org/10.1111/j.1365-2761.1989.tb00313.xopenalex-snapshot
Birds and wild fish as potential vectors of Yersinia ruckeri
inferredcites →https://doi.org/10.1111/j.1365-2761.1989.tb00324.xopenalex-snapshot
Morphological and biochemical differences among isolates of Yersinia ruckeri obtained from wide geographical areas
inferredcites →https://doi.org/10.1111/j.1365-2761.2011.01327.xopenalex-snapshot
Development and validation of real‐time PCR for the detection of Yersinia ruckeri
inferredcites →https://doi.org/10.1111/jfd.12839openalex-snapshot
A highly sensitive, non‐invasive qPCR ‐based strategy for direct quantification of Yersinia ruckeri in fish faeces
inferredcites →https://doi.org/10.1111/jfd.13348openalex-snapshot
Estimating cage‐level mortality distributions following different delousing treatments of Atlantic salmon (salmo salar) in Norway
inferredcites →https://doi.org/10.1111/jfd.13590openalex-snapshot
Biotyping reveals loss of motility in two distinct Yersinia ruckeri lineages exclusive to Norwegian aquaculture
inferredcites →https://doi.org/10.1111/jfd.13656openalex-snapshot
qPCR screening for Yersinia ruckeri clonal complex 1 against a background of putatively avirulent strains in Norwegian aquaculture
inferredcites →https://doi.org/10.1111/raq.12299openalex-snapshot
Salmon lice treatments and salmon mortality in Norwegian aquaculture: a review
inferredcites →https://doi.org/10.1128/aem.00730-18openalex-snapshot
Multilocus Variable-Number Tandem-Repeat Analysis of Yersinia ruckeri Confirms the Existence of Host Specificity, Geographic Endemism, and Anthropogenic Dissemination of Virulent Clones
inferredcites →https://doi.org/10.1128/aem.02802-12openalex-snapshot
Development of Quantitative PCR Assays Targeting the 16S rRNA Genes of Enterococcus spp. and Their Application to the Identification of Enterococcus Species in Environmental Samples
inferredcites →https://doi.org/10.1128/aem.58.5.1624-1628.1992openalex-snapshot
Long-term starvation survival of Yersinia ruckeri at different salinities studied by microscopical and flow cytometric methods
inferredcites →https://doi.org/10.1128/aem.63.4.1594-1597.1997openalex-snapshot
Detection of Methylobacterium species by 16S rRNA gene-targeted PCR
inferredcites →https://doi.org/10.1128/aem.65.1.346-350.1999openalex-snapshot
Development of a PCR Assay for Detection of Yersinia ruckeri in Tissues of Inoculated and Naturally Infected Trout
inferredcites →https://doi.org/10.1128/aem.68.10.5177-5180.2002openalex-snapshot
Simultaneous Detection of Aeromonas salmonicida , Flavobacterium psychrophilum , and Yersinia ruckeri , Three Major Fish Pathogens, by Multiplex PCR
inferredcites →https://doi.org/10.1128/aem.68.2.470-475.2002openalex-snapshot
Occurrence and Phenotypic Characterization of Yersinia ruckeri Strains with Biofilm-Forming Capacity in a Rainbow Trout Farm
inferredcites →https://doi.org/10.1128/jcm.35.10.2568-2572.1997openalex-snapshot
PCR detection, identification to species level, and fingerprinting of Campylobacter jejuni and Campylobacter coli direct from diarrheic samples
inferredcites →https://doi.org/10.1128/jcm.38.5.1709-1712.2000openalex-snapshot
Detection of Legionella Species in Respiratory Specimens Using PCR with Sequencing Confirmation
inferredcites →https://doi.org/10.1139/m66-103openalex-snapshot
DESCRIPTION OF A BACTERIUM ASSOCIATED WITH REDMOUTH DISEASE OF RAINBOW TROUT (SALMO GAIRDNERI)
inferredcites →https://doi.org/10.1177/104063870001200611openalex-snapshot
Polymerase Chain Reaction for Definitive Identification of Yersinia Ruckeri
inferredcites →https://doi.org/10.1186/s13071-018-2916-3openalex-snapshot
Catching the fish with the worm: a case study on eDNA detection of the monogenean parasite Gyrodactylus salaris and two of its hosts, Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss)
inferredcites →https://doi.org/10.1371/journal.pone.0011147openalex-snapshot
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
inferredcites →https://doi.org/10.3354/dao03618openalex-snapshot
Early detection of salmonid alphavirus in seawater from marine farm sites of Atlantic salmon Salmo salar
inferredcites →https://doi.org/10.3389/fmicb.2015.01198openalex-snapshot
Phylogeography of Yersinia ruckeri reveals effects of past evolutionary events on the current strain distribution and explains variations in the global transmission of enteric redmouth (ERM) disease
inferredcites →https://doi.org/10.3389/fmicb.2020.01809openalex-snapshot
An Optimized Method to Assess Viable Escherichia coli O157:H7 in Agricultural Soil Using Combined Propidium Monoazide Staining and Quantitative PCR
inferredcites →https://doi.org/10.7120/09627286.30.2.117openalex-snapshot
Thermal delousing in anaesthetised small Atlantic salmon (Salmo salar) post-smolts: A case study showing the viability of anaesthesia prior to delousing for improved welfare during treatment for salmon lice

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4746249openalex-extracted
Transfer and Bioaccumulation of Chemical and Biological Contaminants in the Marine Polychaete Hediste Diversicolor (of Müller 1776) When Reared on Salmon Aquaculture Sludge
inferred← citeshttps://doi.org/10.2139/ssrn.4760980openalex-extracted
Transfer and Bioaccumulation of Chemical and Biological Contaminants in the Marine Polychaete Hediste Diversicolor (OF Müller 1776) When Reared on Salmon Aquaculture Sludge
inferred← citeshttps://doi.org/10.1016/j.dci.2025.105452openalex-snapshot
Comparative multi-transcriptomic analysis of Atlantic salmon (Salmo salar) under distinct pathogen infections
inferred← citeshttps://doi.org/10.1016/j.jenvman.2024.122073openalex-snapshot
Transfer and bioaccumulation of chemical and biological contaminants in the marine polychaete Hediste diversicolor (OF müller 1776) when reared on salmon aquaculture sludge
inferred← citeshttps://doi.org/10.1038/s41598-026-48791-xopenalex-snapshot
Integrated approaches for pathogen monitoring and shotgun metagenomic analysis in Atlantic salmon farming
inferred← citeshttps://doi.org/10.1111/jfd.14085openalex-snapshot
Associations Between Delousing Practices and Pasteurellosis in Farmed Atlantic Salmon
inferred← citeshttps://doi.org/10.1371/journal.pone.0285257openalex-snapshot
Pan-genome survey of the fish pathogen Yersinia ruckeri links accessory- and amplified genes to virulence
inferred← citeshttps://doi.org/10.1371/journal.pone.0312337openalex-snapshot
A refinement to eRNA and eDNA-based detection methods for reliable and cost-efficient screening of pathogens in Atlantic salmon aquaculture
inferred← citeshttps://doi.org/10.1371/journal.pone.0347930openalex-snapshot
Environmental DNA screening of Phocoenobacter atlanticus subsp. atlanticus in Atlantic salmon aquaculture
inferred← citeshttps://doi.org/10.3389/faquc.2026.1885657openalex-snapshot
Infectious salmon anemia in vaccinated Atlantic salmon: a field case study
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