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Rapid adaptation to a novel light environment: The importance of ontogeny and phenotypic plasticity in shaping the visual system of Nicaraguan Midas cichlid fish (Amphilophus citrinellus spp.)

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Visual pigments and opsin expression in the juveniles of three species of fish (rainbow trout, zebrafish, and killifish) following prolonged exposure to thyroid hormone or retinoic acid
inferredcites →https://doi.org/10.1002/dvg.22940openalex-snapshot
Proximate and ultimate causes of variable visual sensitivities: Insights from cichlid fish radiations
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Undermining the Baldwin Expediting Effect: Does Phenotypic Plasticity Accelerate Evolution?
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Activation and inactivation of thyroid hormone by deiodinases: Local action with general consequences
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Rapid method for the measurement of circulating thyroid hormones in low volumes of teleost fish plasma by LC-ESI/MS/MS
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Population variation in opsin expression in the bluefin killifish, Lucania goodei : a real-time PCR study
inferredcites →https://doi.org/10.1007/s00442-006-0516-yopenalex-snapshot
Population differences in host use by a seed-beetle: local adaptation, phenotypic plasticity and maternal effects
inferredcites →https://doi.org/10.1007/s10695-011-9506-zopenalex-snapshot
Estradiol and triiodothyronine differentially modulate reproductive and thyroidal genes in male goldfish
inferredcites →https://doi.org/10.1007/s12562-015-0936-xopenalex-snapshot
Sequence analysis and expression patterns of opsin genes in the longtooth grouper Epinephelus bruneus
inferredcites →https://doi.org/10.1016/0042-6989(81)90207-8openalex-snapshot
Chromatic organization of a cichlid fish retina
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Mix and Match Color Vision: Tuning Spectral Sensitivity by Differential Opsin Gene Expression in Lake Malawi Cichlids
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Deiodinases and thyroid metabolism disruption in teleost fish
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Deiodinase knockdown affects zebrafish eye development at the level of gene expression, morphology and function
inferredcites →https://doi.org/10.1016/j.ygcen.2003.09.010openalex-snapshot
Effects of iodothyronines on the hepatic outer-ring deiodinating pathway in killifish
inferredcites →https://doi.org/10.1016/j.ygcen.2011.04.022openalex-snapshot
Tissue-specific thyroid hormone regulation of gene transcripts encoding iodothyronine deiodinases and thyroid hormone receptors in striped parrotfish (Scarus iseri)
inferredcites →https://doi.org/10.1016/s0047-2484(78)80055-4openalex-snapshot
Ontogeny and phylogeny
inferredcites →https://doi.org/10.1016/s1350-9462(00)00002-1openalex-snapshot
Molecular evolution of vertebrate visual pigments
inferredcites →https://doi.org/10.1016/s1350-9462(00)00014-8openalex-snapshot
Vertebrate Photoreceptors
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Heterochrony and allometry: the analysis of evolutionary change in ontogeny
inferredcites →https://doi.org/10.1017/s0094837300006588openalex-snapshot
Size and shape in ontogeny and phylogeny
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The Molecular Basis of Visual Excitation
inferredcites →https://doi.org/10.1038/83829openalex-snapshot
A thyroid hormone receptor that is required for the development of green cone photoreceptors
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Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks
inferredcites →https://doi.org/10.1038/nature04325openalex-snapshot
Sympatric speciation in Nicaraguan crater lake cichlid fish
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Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature
inferredcites →https://doi.org/10.1038/ncomms6168openalex-snapshot
Parallel evolution of Nicaraguan crater lake cichlid fishes via non-parallel routes
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Effective population size and patterns of molecular evolution and variation
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Body shape variation in cichlid fishes of the Amphilophus citrinellus species complex
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Heterochrony: Developmental mechanisms and evolutionary results
inferredcites →https://doi.org/10.1073/pnas.0509981103openalex-snapshot
Making the gradient: Thyroid hormone regulates cone opsin expression in the developing mouse retina
inferredcites →https://doi.org/10.1073/pnas.0807875106openalex-snapshot
Distinct developmental mechanisms underlie the evolutionary diversification of Drosophila sex combs
inferredcites →https://doi.org/10.1073/pnas.94.3.907openalex-snapshot
The analysis of ontogenetic trajectories: When a change in size or shape is not heterochrony
inferredcites →https://doi.org/10.1086/276408openalex-snapshot
A New Factor in Evolution
inferredcites →https://doi.org/10.1086/518952openalex-snapshot
Influence of Plasticity and Learning on Evolution under Directional Selection
inferredcites →https://doi.org/10.1089/thy.2005.15.777openalex-snapshot
Cellular and Structural Biology of the Deiodinases
inferredcites →https://doi.org/10.1093/biomet/52.3-4.591openalex-snapshot
An Analysis of Variance Test for Normality (Complete Samples)
inferredcites →https://doi.org/10.1093/icb/icp079openalex-snapshot
Gene duplication and differential gene expression play an important role in the diversification of visual pigments in fish
inferredcites →https://doi.org/10.1093/molbev/msl014openalex-snapshot
Evolution of the Cichlid Visual Palette through Ontogenetic Subfunctionalization of the Opsin Gene Arrays
inferredcites →https://doi.org/10.1093/molbev/msx143openalex-snapshot
Rapid and Parallel Adaptive Evolution of the Visual System of Neotropical Midas Cichlid Fishes
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003940openalex-snapshot
Cone Opsin Genes of African Cichlid Fishes: Tuning Spectral Sensitivity by Differential Gene Expression
inferredcites →https://doi.org/10.1098/rspb.2003.2372openalex-snapshot
The role of phenotypic plasticity in driving genetic evolution
inferredcites →https://doi.org/10.1098/rspb.2012.2490openalex-snapshot
Opsin switch reveals function of the ultraviolet cone in fish foraging
inferredcites →https://doi.org/10.1098/rspb.2014.1486openalex-snapshot
Plasticity predicts evolution in a marine alga
inferredcites →https://doi.org/10.1098/rspb.2016.0058openalex-snapshot
Diminished foraging performance of a mutant zebrafish with reduced population of ultraviolet cones
inferredcites →https://doi.org/10.1098/rstb.2009.0271openalex-snapshot
Local variation and parallel evolution: morphological and genetic diversity across a species complex of neotropical crater lake cichlid fishes
inferredcites →https://doi.org/10.1111/1365-2656.12693openalex-snapshot
The role of rare morph advantage and conspicuousness in the stable gold‐dark colour polymorphism of a crater lake Midas cichlid fish
inferredcites →https://doi.org/10.1111/evo.12367openalex-snapshot
SPECIES-SPECIFIC DIFFERENCES IN ADAPTIVE PHENOTYPIC PLASTICITY IN AN ECOLOGICALLY RELEVANT TROPHIC TRAIT: HYPERTROPHIC LIPS IN MIDAS CICHLID FISHES
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00032.xopenalex-snapshot
EVOLUTIONARY IMPLICATIONS OF PHENOTYPIC PLASTICITY IN THE HINDLIMB OF THE LIZARD ANOLIS SAGREI
inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb00354.xopenalex-snapshot
PERSPECTIVE: GENETIC ASSIMILATION AND A POSSIBLE EVOLUTIONARY PARADOX: CAN MACROEVOLUTION SOMETIMES BE SO FAST AS TO PASS US BY?
inferredcites →https://doi.org/10.1111/j.1365-2435.2007.01283.xopenalex-snapshot
Adaptive versus non‐adaptive phenotypic plasticity and the potential for contemporary adaptation in new environments
inferredcites →https://doi.org/10.1111/j.1365-294x.2004.02211.xopenalex-snapshot
The Midas cichlid species complex: incipient sympatric speciation in Nicaraguan cichlid fishes?
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04621.xopenalex-snapshot
Plasticity of opsin gene expression in cichlids from Lake Malawi
inferredcites →https://doi.org/10.1111/j.1420-9101.2009.01754.xopenalex-snapshot
Adaptation to an extraordinary environment by evolution of phenotypic plasticity and genetic assimilation
inferredcites →https://doi.org/10.1111/j.1461-0248.2004.00684.xopenalex-snapshot
Conceptual issues in local adaptation
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Heterochrony and allometry: the analysis of evolutionary change in ontogeny
inferredcites →https://doi.org/10.1111/j.1525-142x.2011.00469.xopenalex-snapshot
New evidence for the role of heterochrony in the repeated evolution of cichlid opsin expression
inferredcites →https://doi.org/10.1111/j.1558-5646.1953.tb00069.xopenalex-snapshot
THE BALDWIN EFFECT
inferredcites →https://doi.org/10.1111/j.1558-5646.1975.tb00807.xopenalex-snapshot
THE BOTTLENECK EFFECT AND GENETIC VARIABILITY IN POPULATIONS
inferredcites →https://doi.org/10.1111/j.1558-5646.1987.tb02473.xopenalex-snapshot
PHENOTYPIC PLASTICITY AND HETEROCHRONY IN CICHLASOMA MANAGUENSE (PISCES, CICHLIDAE) AND THEIR IMPLICATIONS FOR SPECIATION IN CICHLID FISHES
inferredcites →https://doi.org/10.1111/j.1558-5646.2007.00203.xopenalex-snapshot
THE BALDWIN EFFECT AND GENETIC ASSIMILATION: REVISITING TWO MECHANISMS OF EVOLUTIONARY CHANGE MEDIATED BY PHENOTYPIC PLASTICITY
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01694.xopenalex-snapshot
LOCAL ADAPTATION AND THE EVOLUTION OF PHENOTYPIC PLASTICITY IN TRINIDADIAN GUPPIES (POECILIA RETICULATA)
inferredcites →https://doi.org/10.1111/mec.12851openalex-snapshot
Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish
inferredcites →https://doi.org/10.1111/mec.13312openalex-snapshot
Variable light environments induce plastic spectral tuning by regional opsin coexpression in the African cichlid fish, Metriaclima zebra
inferredcites →https://doi.org/10.1111/mec.13880openalex-snapshot
How plasticity, genetic assimilation and cryptic genetic variation may contribute to adaptive radiations
inferredcites →https://doi.org/10.1111/mec.14029openalex-snapshot
Incipient speciation driven by hypertrophied lips in Midas cichlid fishes?
inferredcites →https://doi.org/10.1126/science.1117004openalex-snapshot
Selection on Heritable Phenotypic Plasticity in a Wild Bird Population
inferredcites →https://doi.org/10.1130/0016-7606(1985)96<553:qvsomn>2.0.co;2openalex-snapshot
Quaternary volcanic stratigraphy of Managua, Nicaragua: Correlation and source assignment for multiple overlapping plinian deposits
inferredcites →https://doi.org/10.1167/iovs.08-2713openalex-snapshot
Thyroid Hormone Induces a Time-Dependent Opsin Switch in the Retina of Salmonid Fishes
inferredcites →https://doi.org/10.1186/1471-2148-10-326openalex-snapshot
Phylogeography, colonization and population history of the Midas cichlid species complex (Amphilophus spp.) in the Nicaraguan crater lakes
inferredcites →https://doi.org/10.1186/1741-7007-6-22openalex-snapshot
Visual sensitivities tuned by heterochronic shifts in opsin gene expression
inferredcites →https://doi.org/10.1210/en.2017-00055openalex-snapshot
Deletion of the Thyroid Hormone–Activating Type 2 Deiodinase Rescues Cone Photoreceptor Degeneration but Not Deafness in Mice Lacking Type 3 Deiodinase
inferredcites →https://doi.org/10.1242/jeb.012047openalex-snapshot
The influence of ontogeny and light environment on the expression of visual pigment opsins in the retina of the black bream,Acanthopagrus butcheri
inferredcites →https://doi.org/10.1242/jeb.02070openalex-snapshot
Phenotypic plasticity and evolution by genetic assimilation
inferredcites →https://doi.org/10.1371/journal.pbio.0040433openalex-snapshot
Divergent Selection on Opsins Drives Incipient Speciation in Lake Victoria Cichlids
inferredcites →https://doi.org/10.1371/journal.pbio.1000266openalex-snapshot
The Eyes Have It: Regulatory and Structural Changes Both Underlie Cichlid Visual Pigment Diversity
inferredcites →https://doi.org/10.1371/journal.pgen.1006157openalex-snapshot
Multispecies Outcomes of Sympatric Speciation after Admixture with the Source Population in Two Radiations of Nicaraguan Crater Lake Cichlids
inferredcites →https://doi.org/10.1523/jneurosci.6181-10.2011openalex-snapshot
Thyroid Hormone Controls Cone Opsin Expression in the Retina of Adult Rodents
inferredcites →https://doi.org/10.1554/02-381openalex-snapshot
PERSPECTIVE: GENETIC ASSIMILATION AND A POSSIBLE EVOLUTIONARY PARADOX: CAN MACROEVOLUTION SOMETIMES BE SO FAST AS TO PASS US BY?
inferredcites →https://doi.org/10.2307/1911963openalex-snapshot
A Simple Test for Heteroscedasticity and Random Coefficient Variation
inferredcites →https://doi.org/10.2307/2405746openalex-snapshot
The Baldwin Effect
inferredcites →https://doi.org/10.2307/2529511openalex-snapshot
The Analysis of Ranked Data Derived from Completely Randomized Factorial Designs
inferredcites →https://doi.org/10.2307/3546709openalex-snapshot
The Influence of Phenotypic Modifications on Evolution: The Baldwin Effect and Modern Perspectives
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R: A Language and Environment for Statistical Computing

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1007/s10750-022-04932-7openalex-snapshot
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inferred← citeshttps://doi.org/10.1242/jeb.188300openalex-snapshot
Variable vision in variable environments: the visual system of an invasive cichlid (Cichla monoculus, Agassiz, 1831) in Lake Gatun, Panama
inferred← citeshttps://doi.org/10.1242/jeb.193334openalex-snapshot
Seeing the rainbow: mechanisms underlying spectral sensitivity in teleost fishes
inferred← citeshttps://doi.org/10.1242/jeb.209916openalex-snapshot
Visual system development of the spotted unicornfish, Naso brevirostris (Acanthuridae)
inferred← citeshttps://doi.org/10.1242/jeb.249878openalex-snapshot
Light environment and seasonal variation in the visual system of the red shiner ( Cyprinella lutrensis )
inferred← citeshttps://doi.org/10.1242/jeb.250332openalex-snapshot
Phenotypic plasticity in visual opsin gene expression: a meta-analysis in teleost fish
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1005974openalex-snapshot
Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulations
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1008212openalex-snapshot
Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance
inferred← citeshttps://doi.org/10.1371/journal.pone.0192177openalex-snapshot
First true brackish-water nudibranch mollusc provides new insights for phylogeny and biogeography and reveals paedomorphosis-driven evolution
inferred← citeshttps://doi.org/10.1371/journal.pone.0215376openalex-snapshot
Plasticity of opsin gene expression in the adult red shiner (Cyprinella lutrensis) in response to turbid habitats
inferred← citeshttps://doi.org/10.3389/fcell.2025.1531162openalex-snapshot
Water temperature modulates multidimensional plastic responses to water flow during the ontogeny of a neotropical fish (Astyanax lacustris, characiformes)
inferred← citeshttps://doi.org/10.3390/ijms24108786openalex-snapshot
Knockout of sws2a and sws2b in Medaka (Oryzias latipes) Reveals Their Roles in Regulating Vision-Guided Behavior and Eye Development
inferred← citeshttps://doi.org/10.3390/ijms25147513openalex-snapshot
Sws2 Gene Positively Regulates Melanin Production in Plectropomus leopardus Skin via Direct Regulation of the Synthesis of Retinoic Acid
inferred← citeshttps://doi.org/10.6084/m9.figshare.14746663openalex-snapshot
Additional file 1 of Evolutionary ecology of the visual opsin gene sequence and its expression in turbot (Scophthalmus maximus)
inferred← citeshttps://doi.org/10.6084/m9.figshare.14746666openalex-snapshot
Additional file 2 of Evolutionary ecology of the visual opsin gene sequence and its expression in turbot (Scophthalmus maximus)
inferred← citeshttps://doi.org/10.6084/m9.figshare.20168133openalex-snapshot
Additional file 1 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs
inferred← citeshttps://doi.org/10.70675/df0ee706z135bz40b1zaac1zd8511c590fb4openalex-snapshot
The clownfish Amphiprion ocellaris : a model species to study the metamorphosis of coral reef
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