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Host hybridization as a potential mechanism of lateral symbiont transfer in deep‐sea vesicomyid clams

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-90-481-9572-5_2openalex-snapshot
Genetics and Evolution of Deep-Sea Chemosynthetic Bacteria and Their Invertebrate Hosts
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Role of Productivity and Protozoan Abundance for the Occurrence of Predation-resistant Bacteria in Aquatic Systems
inferredcites →https://doi.org/10.1007/s10592-015-0750-0openalex-snapshot
Population structure and connectivity in Indo-Pacific deep-sea mussels of the Bathymodiolus septemdierum complex
inferredcites →https://doi.org/10.1007/s11692-012-9195-2openalex-snapshot
Biparental Inheritance Through Uniparental Transmission: The Doubly Uniparental Inheritance (DUI) of Mitochondrial DNA
inferredcites →https://doi.org/10.1016/j.cub.2007.04.039openalex-snapshot
Reduced Genome of the Thioautotrophic Intracellular Symbiont in a Deep-Sea Clam, Calyptogena okutanii
inferredcites →https://doi.org/10.1016/j.cub.2015.07.055openalex-snapshot
Endosymbiosis and Eukaryotic Cell Evolution
inferredcites →https://doi.org/10.1016/j.tree.2004.01.003openalex-snapshot
Hybridization and adaptive radiation
inferredcites →https://doi.org/10.1016/j.tree.2012.03.011openalex-snapshot
Speciation by symbiosis
inferredcites →https://doi.org/10.1016/j.tree.2019.02.008openalex-snapshot
A Combinatorial View on Speciation and Adaptive Radiation
inferredcites →https://doi.org/10.1016/s0169-5347(01)02290-xopenalex-snapshot
The problems with hybrids: setting conservation guidelines
inferredcites →https://doi.org/10.1038/35055543openalex-snapshot
Wolbachia-induced incompatibility precedes other hybrid incompatibilities in Nasonia
inferredcites →https://doi.org/10.1038/ncomms6770openalex-snapshot
European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation
inferredcites →https://doi.org/10.1038/nrmicro1982openalex-snapshot
Are biologists in 'future shock'? Symbiosis integrates biology across domains
inferredcites →https://doi.org/10.1038/nrmicro1992openalex-snapshot
Symbiotic diversity in marine animals: the art of harnessing chemosynthesis
inferredcites →https://doi.org/10.1038/nrmicro2262openalex-snapshot
A complex journey: transmission of microbial symbionts
inferredcites →https://doi.org/10.1038/sj.hdy.6800994openalex-snapshot
Bidirectional incompatibility among divergent Wolbachia and incompatibility level differences among closely related Wolbachia in Nasonia
inferredcites →https://doi.org/10.1073/pnas.0605772103openalex-snapshot
Sexual acquisition of beneficial symbionts in aphids
inferredcites →https://doi.org/10.1073/pnas.1218525110openalex-snapshot
Animals in a bacterial world, a new imperative for the life sciences
inferredcites →https://doi.org/10.1073/pnas.1402476111openalex-snapshot
Intrasperm vertical symbiont transmission
inferredcites →https://doi.org/10.1073/pnas.1421388112openalex-snapshot
Heritable symbiosis: The advantages and perils of an evolutionary rabbit hole
inferredcites →https://doi.org/10.1080/14772000.2016.1252438openalex-snapshot
Phylogeny and origins of chemosynthetic vesicomyid clams
inferredcites →https://doi.org/10.1086/303396openalex-snapshot
Accumulation of Deleterious Mutations in Endosymbionts: Muller’s Ratchet with Two Levels of Selection
inferredcites →https://doi.org/10.1093/bioinformatics/btm253openalex-snapshot
Recombination-filtered genomic datasets by information maximization
inferredcites →https://doi.org/10.1093/bioinformatics/btu041openalex-snapshot
ngsTools: methods for population genetics analyses from next-generation sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot
Trimmomatic: a flexible trimmer for Illumina sequence data
inferredcites →https://doi.org/10.1093/gbe/evx166openalex-snapshot
Ancient Occasional Host Switching of Maternally Transmitted Bacterial Symbionts of Chemosynthetic Vesicomyid Clams
inferredcites →https://doi.org/10.1093/molbev/msn010openalex-snapshot
Lateral Symbiont Acquisition in a Maternally Transmitted Chemosynthetic Clam Endosymbiosis
inferredcites →https://doi.org/10.1093/molbev/msp049openalex-snapshot
Evidence for Homologous Recombination in Intracellular Chemosynthetic Clam Symbionts
inferredcites →https://doi.org/10.1093/molbev/msp233openalex-snapshot
How Robust Are "Isolation with Migration" Analyses to Violations of the IM Model? A Simulation Study
inferredcites →https://doi.org/10.1093/molbev/msp296openalex-snapshot
Isolation with Migration Models for More Than Two Populations
inferredcites →https://doi.org/10.1093/molbev/mss180openalex-snapshot
Genome Reduction and Co-evolution between the Primary and Secondary Bacterial Symbionts of Psyllids
inferredcites →https://doi.org/10.1093/molbev/msy096openalex-snapshot
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
inferredcites →https://doi.org/10.1098/rsos.160130openalex-snapshot
Surfing the vegetal pole in a small population: extracellular vertical transmission of an 'intracellular' deep-sea clam symbiont
inferredcites →https://doi.org/10.1098/rspb.2000.1232openalex-snapshot
Wolbachia–induced ‘hybrid breakdown’ in the two–fspotted spider miteTetranychus urticaeKoch
inferredcites →https://doi.org/10.1111/1462-2920.12427openalex-snapshot
Dual symbiosis with co‐occurring sulfur‐oxidizing symbionts in vestimentiferan tubeworms from a M editerranean hydrothermal vent
inferredcites →https://doi.org/10.1111/1755-0998.12990openalex-snapshot
Genotype‐free estimation of allele frequencies reduces bias and improves demographic inference from RADSeq data
inferredcites →https://doi.org/10.1111/j.1462-2920.2009.01933.xopenalex-snapshot
Pyrosequencing analysis of endosymbiont population structure: co‐occurrence of divergent symbiont lineages in a single vesicomyid host clam
inferredcites →https://doi.org/10.1111/j.1471-8286.2004.00770.xopenalex-snapshot
genotype and genodive : two programs for the analysis of genetic diversity of asexual organisms
inferredcites →https://doi.org/10.1111/jeb.12026openalex-snapshot
Conditions when hybridization might predispose populations for adaptive radiation
inferredcites →https://doi.org/10.1126/science.1135875openalex-snapshot
Homoploid Hybrid Speciation in an Extreme Habitat
inferredcites →https://doi.org/10.1126/science.1240659openalex-snapshot
The Hologenomic Basis of Speciation: Gut Bacteria Cause Hybrid Lethality in the Genus Nasonia
inferredcites →https://doi.org/10.1128/aem.71.4.1694-1700.2005openalex-snapshot
Dual Symbiosis in a Bathymodiolus sp. Mussel from a Methane Seep on the Gabon Continental Margin (Southeast Atlantic): 16S rRNA Phylogeny and Distribution of the Symbionts in Gills
inferredcites →https://doi.org/10.1139/gen-2015-0090openalex-snapshot
Atypical mitochondrial inheritance patterns in eukaryotes
inferredcites →https://doi.org/10.1146/annurev-ecolsys-032513-100555openalex-snapshot
The Epidemiology and Evolution of Symbionts with Mixed-Mode Transmission
inferredcites →https://doi.org/10.1146/annurev.genet.41.110306.130119openalex-snapshot
Genomics and Evolution of Heritable Bacterial Symbionts
inferredcites →https://doi.org/10.1186/1471-2148-11-285openalex-snapshot
Loss of genes for DNA recombination and repair in the reductive genome evolution of thioautotrophic symbionts of Calyptogena clams
inferredcites →https://doi.org/10.1186/s12859-014-0356-4openalex-snapshot
ANGSD: Analysis of Next Generation Sequencing Data
inferredcites →https://doi.org/10.1214/aos/1013699998openalex-snapshot
The control of the false discovery rate in multiple testing under dependency
inferredcites →https://doi.org/10.1371/journal.pbio.0040325openalex-snapshot
Asymmetrical Reinforcement and Wolbachia Infection in Drosophila
inferredcites →https://doi.org/10.1371/journal.pgen.1000695openalex-snapshot
Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data
inferredcites →https://doi.org/10.1371/journal.pone.0064830openalex-snapshot
Physical Proximity May Promote Lateral Acquisition of Bacterial Symbionts in Vesicomyid Clams
inferredcites →https://doi.org/10.1371/journal.pone.0171274openalex-snapshot
Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams
inferredcites →https://doi.org/10.2307/25066600openalex-snapshot
Subtype Variation Among Bacterial Endosymbionts of Tubeworms (Annelida: Siboglinidae) from the Gulf of California
inferredcites →https://doi.org/10.2307/3802723openalex-snapshot
Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach
inferredcites →https://doi.org/10.7717/peerj.203openalex-snapshot
ezRAD: a simplified method for genomic genotyping in non-model organisms
inferredcites →https://doi.org/10.7717/peerj.2760openalex-snapshot
Pursuing the quest for better understanding the taxonomic distribution of the system of doubly uniparental inheritance of mtDNA
inferredcites →https://doi.org/10.7717/peerj.431openalex-snapshot
dDocent : a RADseq, variant-calling pipeline designed for population genomics of non-model organisms

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.5852/ejt.2022.845.1959zenodo-depositor-declared
Cutting the ribbon: bathyal Nemertea from seeps along the Costa Rica margin, with descriptions of 2 new genera and 9 new species
inferred← citeshttps://doi.org/10.1002/ece3.73511openalex-snapshot
Widespread Lateral Transmission in Fergusonina Galling Flies (Diptera: Fergusoninidae) and Their Obligate Nematode Mutualists Does Not Preclude an Overall Pattern of Cospeciation
inferred← citeshttps://doi.org/10.1002/ece3.8739openalex-snapshot
Low‐coverage reduced representation sequencing reveals subtle within‐island genetic structure in Aldabra giant tortoises
inferred← citeshttps://doi.org/10.1016/j.dsr.2020.103322openalex-snapshot
Spanning the depths or depth-restricted: Three new species of Bathymodiolus (Bivalvia, Mytilidae) and a new record for the hydrothermal vent Bathymodiolus thermophilus at methane seeps along the Costa Rica margin
inferred← citeshttps://doi.org/10.1016/j.dsr.2021.103685openalex-snapshot
Genetic diversity, gene flow and hybridization in fan-shaped sponges (Phakellia spp.) in the North-East Atlantic deep sea
inferred← citeshttps://doi.org/10.1093/molbev/msaa177openalex-snapshot
Allopatric and Sympatric Drivers of Speciation inAlviniconchaHydrothermal Vent Snails
inferred← citeshttps://doi.org/10.1098/rspb.2021.2137openalex-snapshot
Divergent paths in the evolutionary history of maternally transmitted clam symbionts
inferred← citeshttps://doi.org/10.1101/2020.02.01.930370openalex-snapshot
Extreme Genomic Makeover: Evolutionary History of Maternally-transmitted Clam Symbionts
inferred← citeshttps://doi.org/10.1101/2020.10.19.345819openalex-snapshot
Differences in cofactor, oxygen and sulfur requirements influence niche adaptation in deep-sea vesicomyid clam symbioses
inferred← citeshttps://doi.org/10.1101/2021.11.08.467072openalex-snapshot
Low-coverage reduced representation sequencing reveals subtle within-island genetic structure in Aldabra giant tortoises
inferred← citeshttps://doi.org/10.1111/cla.70001openalex-snapshot
Phylogenomic analyses of Pliocardiinae (Bivalvia: Vesicomyidae) update genus‐level taxonomy and shed light on trait evolution
inferred← citeshttps://doi.org/10.1111/mec.15262openalex-snapshot
Can interspecies affairs in the dark lead to evolutionary innovation?
inferred← citeshttps://doi.org/10.1111/mec.15328openalex-snapshot
Editorial 2020
inferred← citeshttps://doi.org/10.1371/journal.pgen.1008935openalex-snapshot
Horizontal transmission and recombination maintain forever young bacterial symbiont genomes
inferred← citeshttps://doi.org/10.3389/fgene.2022.970314openalex-snapshot
Speciation of pelagic zooplankton: Invisible boundaries can drive isolation of oceanic ctenophores
inferred← citeshttps://doi.org/10.70675/bf7aab7fzc361z40c2z9ac6z34c7f7b317dbopenalex-snapshot
Cycles de vie de deux crevettes hydrothermales de la dorsale médio-atlantique : Rimicaris exoculata et Rimicaris chacei
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