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Pleistocene persistence and expansion in tarantulas on the Colorado Plateau and the effects of missing data on phylogeographical inferences from RADseq
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Very high resolution interpolated climate surfaces for global land areas
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A Combined Molecular Approach to Phylogeny of the Jumping Spider Subfamily Dendryphantinae (Araneae: Salticidae)
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Maximum entropy modeling of species geographic distributions
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The effect of missing data on coalescent species delimitation and a taxonomic revision of whipsnakes (Colubridae: Masticophis)
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inferredcites →https://doi.org/10.1016/j.yqres.2008.04.006openalex-snapshot
50,000 years of vegetation and climate history on the Colorado Plateau, Utah and Arizona, USA
inferredcites →https://doi.org/10.1016/j.yqres.2012.11.001openalex-snapshot
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inferredcites →https://doi.org/10.1046/j.1365-294x.2003.01731.xopenalex-snapshot
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inferredcites →https://doi.org/10.1093/bioinformatics/btu121openalex-snapshot
PyRAD: assembly of de novo RADseq loci for phylogenetic analyses
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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
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inferredcites →https://doi.org/10.1093/sysbio/syv053openalex-snapshot
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inferredcites →https://doi.org/10.1093/sysbio/syy032openalex-snapshot
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Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)
inferredcites →https://doi.org/10.1111/1755-0998.12566openalex-snapshot
RAD cap: sequence capture of dual‐digest RAD seq libraries with identifiable duplicates and reduced missing data
inferredcites →https://doi.org/10.1111/2041-210x.12410openalex-snapshot
popart : full‐feature software for haplotype network construction
inferredcites →https://doi.org/10.1111/2041-210x.12700openalex-snapshot
Bioinformatic processing of RAD‐seq data dramatically impacts downstream population genetic inference
inferredcites →https://doi.org/10.1111/evo.12491openalex-snapshot
MICROHABITAT DIFFERENCES IMPACT PHYLOGEOGRAPHIC CONCORDANCE OF CODISTRIBUTED SPECIES: GENOMIC EVIDENCE IN MONTANE SEDGES (CAREXL.) FROM THE ROCKY MOUNTAINS
inferredcites →https://doi.org/10.1111/icad.12089openalex-snapshot
Integrative species delimitation and conservation of tarantulas (Araneae, Mygalomorphae, Theraphosidae) from a North American biodiversity hotspot
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00566.xopenalex-snapshot
TESTS OF PLEISTOCENE SPECIATION IN MONTANE GRASSHOPPERS (GENUS MELANOPLUS) FROM THE SKY ISLANDS OF WESTERN NORTH AMERICA
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00714.xopenalex-snapshot
PHYLOGEOGRAPHY OF THE JUMPING SPIDER HABRONATTUS PUGILLIS (ARANEAE: SALTICIDAE): RECENT VICARIANCE OF SKY ISLAND POPULATIONS?
inferredcites →https://doi.org/10.1111/j.0908-8857.2004.03297.xopenalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1095-8312.2010.01526.xopenalex-snapshot
Phylogeographic analysis of the nocturnal velvet ant genus Dilophotopsis (Hymenoptera: Mutillidae) provides insights into diversification in the Nearctic deserts
inferredcites →https://doi.org/10.1111/j.1365-2486.2011.02508.xopenalex-snapshot
Niche shifting in response to warming climate after the last glacial maximum: inference from genetic data and niche assessments in the chisel-toothed kangaroo rat (Dipodomys microps)
inferredcites →https://doi.org/10.1111/j.1365-2699.2009.02202.xopenalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1365-294x.2004.02396.xopenalex-snapshot
FAST‐TRACK: Integrating QTL mapping and genome scans towards the characterization of candidate loci under parallel selection in the lake whitefish (Coregonus clupeaformis)
inferredcites →https://doi.org/10.1111/j.1365-294x.2005.02553.xopenalex-snapshot
Detecting the number of clusters of individuals using the software structure : a simulation study
inferredcites →https://doi.org/10.1111/j.1365-294x.2005.02645.xopenalex-snapshot
Cryptic Neogene vicariance and Quaternary dispersal of the red‐spotted toad ( Bufo punctatus ): insights on the evolution of North American warm desert biotas
inferredcites →https://doi.org/10.1111/j.1365-294x.2005.02647.xopenalex-snapshot
Phylogeography of the longhorn cactus beetle Moneilema appressum LeConte (Coleoptera: Cerambycidae): was the differentiation of the Madrean sky islands driven by Pleistocene climate changes?
inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03007.xopenalex-snapshot
Evolution of rattlesnakes (Viperidae; Crotalus) in the warm deserts of western North America shaped by Neogene vicariance and Quaternary climate change
inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03015.xopenalex-snapshot
Phylogeography of the Western Lyresnake (Trimorphodon biscutatus): testing aridland biogeographical hypotheses across the Nearctic–Neotropical transition
inferredcites →https://doi.org/10.1111/j.1365-294x.2007.03515.xopenalex-snapshot
Phylogeography of the tree lizard,Urosaurus ornatus: responses of populations to past climate change
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05664.xopenalex-snapshot
The biogeography of mitochondrial and nuclear discordance in animals
inferredcites →https://doi.org/10.1111/j.1471-8286.2007.01758.xopenalex-snapshot
Inference of population structure using multilocus genotype data: dominant markers and null alleles
inferredcites →https://doi.org/10.1111/j.1472-4642.2010.00725.xopenalex-snapshot
A statistical explanation of MaxEnt for ecologists
inferredcites →https://doi.org/10.1111/j.1472-4642.2012.00902.xopenalex-snapshot
Identifying Pleistocene refugia in North American cold deserts using phylogeographic analyses and ecological niche modelling
inferredcites →https://doi.org/10.1111/j.1502-3885.1991.tb00456.xopenalex-snapshot
Packrat middens: the last 40,000 years of biotic change
inferredcites →https://doi.org/10.1111/j.1558-5646.2010.01014.xopenalex-snapshot
ELUCIDATION OF CRYPTIC DIVERSITY IN A WIDESPREAD NEARCTIC TREEFROG REVEALS EPISODES OF MITOCHONDRIAL GENE CAPTURE AS FROGS DIVERSIFIED ACROSS A DYNAMIC LANDSCAPE
inferredcites →https://doi.org/10.1111/j.1600-0587.2009.06142.xopenalex-snapshot
ENMTools: a toolbox for comparative studies of environmental niche models
inferredcites →https://doi.org/10.1111/j.1600-0587.2013.07872.xopenalex-snapshot
A practical guide to MaxEnt for modeling species' distributions: what it does, and why inputs and settings matter
inferredcites →https://doi.org/10.1111/jbi.12079openalex-snapshot
Phylogeography of the A rizona hairy scorpion ( H adrurus arizonensis) supports a model of biotic assembly in the M ojave D esert and adds a new P leistocene refugium
inferredcites →https://doi.org/10.1111/jbi.12494openalex-snapshot
Miocene extensional tectonics explain ancient patterns of diversification among turret‐building tarantulas (Aphonopelma mojave group) in the Mojave and Sonoran deserts
inferredcites →https://doi.org/10.1111/jbi.12717openalex-snapshot
Historical refugia have shaped biogeographical patterns of species richness and phylogenetic diversity in mite harvestmen (Arachnida, Opiliones, Cyphophthalmi) endemic to the Australian Wet Tropics
inferredcites →https://doi.org/10.1111/jbi.12973openalex-snapshot
Biogeographical evidence for common vicariance and rare dispersal in a southern Appalachian harvestman (Sabaconidae, Sabacon cavicolens)
inferredcites →https://doi.org/10.1111/jbi.13064openalex-snapshot
Pleistocene refugia in the Chihuahuan Desert: the phylogeographic and demographic history of the gymnosperm Ephedra compacta
inferredcites →https://doi.org/10.1111/jbi.13685openalex-snapshot
A legacy of geo‐climatic complexity and genetic divergence along the lower Colorado River: Insights from the geological record and 33 desert‐adapted animals
inferredcites →https://doi.org/10.1111/mec.12023openalex-snapshot
Genome‐wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the L ake V ictoria cichlid adaptive radiation
inferredcites →https://doi.org/10.1111/mec.13789openalex-snapshot
Population genomic evidence for multiple Pliocene refugia in a montane‐restricted harvestman (Arachnida, Opiliones, Sclerobunus robustus) from the southwestern United States
inferredcites →https://doi.org/10.1126/science.1166955openalex-snapshot
Stability Predicts Genetic Diversity in the Brazilian Atlantic Forest Hotspot
inferredcites →https://doi.org/10.1126/science.272.5268.1601openalex-snapshot
Spatial Response of Mammals to Late Quaternary Environmental Fluctuations
inferredcites →https://doi.org/10.1130/0091-7613(2000)028<0091:rtcp>2.0.co;2openalex-snapshot
Raising the Colorado Plateau
inferredcites →https://doi.org/10.1130/1052-5173(2002)012<0004:cpuaee>2.0.co;2openalex-snapshot
Colorado Plateau uplift and erosion evaluated using GIS
inferredcites →https://doi.org/10.1130/ges00801.1openalex-snapshot
Diachronous episodes of Cenozoic erosion in southwestern North America and their relationship to surface uplift, paleoclimate, paleodrainage, and paleoaltimetry
inferredcites →https://doi.org/10.1130/l150.1openalex-snapshot
Mantle-driven dynamic uplift of the Rocky Mountains and Colorado Plateau and its surface response: Toward a unified hypothesis
inferredcites →https://doi.org/10.1139/z09-111openalex-snapshot
Metabolic rates and movements of the male tarantula Aphonopelma anax during the mating season
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110316-022645openalex-snapshot
The Utility of Single Nucleotide Polymorphism (SNP) Data in Phylogenetics
inferredcites →https://doi.org/10.11646/zootaxa.4688.4.4openalex-snapshot
A new species of Aphonopelma (Araneae: Mygalomorphae: Theraphosidae) from the Madrean pine-oak woodlands of northeastern Sonora, Mexico
inferredcites →https://doi.org/10.1177/117693430500100003openalex-snapshot
Arlequin (version 3.0): An integrated software package for population genetics data analysis
inferredcites →https://doi.org/10.1186/1471-2156-11-94openalex-snapshot
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inferredcites →https://doi.org/10.1186/1756-0500-7-841openalex-snapshot
Effect of diversity and missing data on genetic assignment with RAD-Seq markers
inferredcites →https://doi.org/10.1186/2193-1801-3-431openalex-snapshot
STRUCTURE PLOT: a program for drawing elegant STRUCTURE bar plots in user friendly interface
inferredcites →https://doi.org/10.1186/s12864-017-3765-8openalex-snapshot
High-quality genetic mapping with ddRADseq in the non-model tree Quercus rubra
inferredcites →https://doi.org/10.1371/journal.pcbi.1003537openalex-snapshot
BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
inferredcites →https://doi.org/10.1371/journal.pone.0026207openalex-snapshot
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inferredcites →https://doi.org/10.1371/journal.pone.0033986openalex-snapshot
Loss of Genetic Diversity Means Loss of Geological Information: The Endangered Japanese Crayfish Exhibits Remarkable Historical Footprints
inferredcites →https://doi.org/10.1371/journal.pone.0052822openalex-snapshot
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inferredcites →https://doi.org/10.1371/journal.pone.0168933openalex-snapshot
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inferredcites →https://doi.org/10.1636/0161-8202(2000)028[0248:gdijbv]2.0.co;2openalex-snapshot
GROUP DISPERSAL IN JUVENILE BRACHYPELMA VAGANS (ARANEAE, THERAPHOSIDAE)
inferredcites →https://doi.org/10.1644/08-mamm-a-243.1openalex-snapshot
Pleistocene Impacts on the Phylogeography of the Desert Pocket Mouse(Chaetodipus penicillatus)
inferredcites →https://doi.org/10.2307/1382645openalex-snapshot
Evolutionary Genetics and Phylogeography of Tassel-Eared Squirrels (Sciurus aberti)
inferredcites →https://doi.org/10.2307/1447471openalex-snapshot
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inferredcites →https://doi.org/10.2307/j.ctv21wj578.14openalex-snapshot
Late Quaternary Biogeography of the Colorado Plateau
inferredcites →https://doi.org/10.3133/fs11902openalex-snapshot
Precipitation history of the Colorado Plateau region, 1900-2000
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3897/zookeys.147.2024openalex-snapshot
The evolution and age of populations of Scaphinotus petersi Roeschke on Arizona Sky Islands (Coleoptera, Carabidae, Cychrini)
inferredcites →https://doi.org/10.3897/zookeys.560.6264openalex-snapshot
Taxonomic revision of the tarantula genus Aphonopelma Pocock, 1901 (Araneae, Mygalomorphae, Theraphosidae) within the United States
inferredcites →https://doi.org/10.5281/zenodo.16008263openalex-snapshot
Movement of the Male Brown Tarantula, Aphonopelma hentzi (Araneae, Theraphosidae), Using Radio Telemetry
inferredcites →https://doi.org/10.5281/zenodo.16463620openalex-snapshot
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inferredcites →https://doi.org/10.7717/peerj.5089openalex-snapshot
Whole-genome amplification in double-digest RADseq results in adequate libraries but fewer sequenced loci
inferredcites →https://doi.org/10.7717/peerj.7724openalex-snapshot
Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/zookeys.1210.125318zenodo-depositor-declared
Discovery of a new tarantula species from the Madrean Sky Islands and the first documented instance of syntopy between two montane endemics (Araneae, Theraphosidae, Aphonopelma): a case of prior mistaken identity
inferred← citeshttps://doi.org/10.1002/ece3.70107openalex-snapshot
Species distribution models predict genetic isolation of Hetaerina vulnerata Hagen in Selys, 1853 (Odonata, Calopterygidae)
inferred← citeshttps://doi.org/10.1002/ece3.70621openalex-snapshot
The Phylogeography and Diversification of an Endemic Trapdoor Spider Genus, Stasimopus Simon 1892 (Araneae, Mygalomorphae, Stasimopidae) in the Karoo, South Africa
inferred← citeshttps://doi.org/10.1007/s13127-021-00505-zopenalex-snapshot
Pliocene origins, Pleistocene refugia, and postglacial range expansions in southern devil scorpions (Vaejovidae: Vaejovis carolinianus)
inferred← citeshttps://doi.org/10.1016/j.ppees.2024.125811openalex-snapshot
Diversification of Camphorosmeae (Amaranthaceae s.l.) during the Miocene-Pliocene aridification of inland Australia
inferred← citeshttps://doi.org/10.1016/j.ympev.2020.106997openalex-snapshot
Poor performance of DNA barcoding and the impact of RAD loci filtering on the species delimitation of an Iberian ant-eating spider
inferred← citeshttps://doi.org/10.1016/j.ympev.2023.107802openalex-snapshot
Mitochondrial introgression and mito-nuclear discordance obscured the closely related species boundaries in Cletus Stål from China (Heteroptera: Coreidae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108132openalex-snapshot
Congruent patterns of cryptic cladogenesis revealed using RADseq and Sanger sequencing in a velvet worm species complex (Onychophora: Peripatopsidae: Peripatopsis sedgwicki)
inferred← citeshttps://doi.org/10.1016/j.ympev.2024.108246openalex-snapshot
Gondwanan relic or recent arrival? The biogeographic origins and systematics of Australian tarantulas
inferred← citeshttps://doi.org/10.1038/s41598-021-01555-1openalex-snapshot
Diversification and post-glacial range expansion of giant North American camel spiders in genus Eremocosta (Solifugae: Eremobatidae)
inferred← citeshttps://doi.org/10.1086/736843openalex-snapshot
I Am Your Father: Investigating the Genetic Mating System in the Antarctic Sea Spider Nymphon australe
inferred← citeshttps://doi.org/10.1093/gbe/evag081openalex-snapshot
Big Spider, Big Genome: Chromosome-Level Genome of a North American Tarantula ( Aphonopelma marxi ) and Comparative Genomics Across 300 Million Years of Spider Evolution
inferred← citeshttps://doi.org/10.1093/isd/ixab032openalex-snapshot
World Travelers: Parthenogenesis and Ecological Tolerance Enable Multiple Colonization Events by the Widespread Short-Tailed Whipscorpion, Stenochrus portoricensis (Schizomida: Hubbardiidae)
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaf109openalex-snapshot
Diversification of Dolichothele mottai (Araneae: Theraphosidae), a Cerrado endemic tarantula
inferred← citeshttps://doi.org/10.1111/1755-0998.13350openalex-snapshot
The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( Terrapene spp.)
inferred← citeshttps://doi.org/10.1111/cla.12493openalex-snapshot
Phylogenomics and loci dropout patterns of deeply diverged Zodarion ant‐eating spiders suggest a high potential of RAD‐seq for genus‐level spider phylogenetics
inferred← citeshttps://doi.org/10.1111/jbi.70282openalex-snapshot
Tracking a Tarantula Diversification in a Neotropical Open Biome
inferred← citeshttps://doi.org/10.1111/jbi.70348openalex-snapshot
Deep Phylogenomic Structure and Microendemism in Baja California Ammotrechidae (Arachnida: Solifugae) Support a Model of Distributed Diversification
inferred← citeshttps://doi.org/10.1111/mec.16595openalex-snapshot
The role of multiple Pleistocene refugia in promoting diversification in the Pacific Northwest
inferred← citeshttps://doi.org/10.1111/mec.16624openalex-snapshot
Phylogeography and population genetics of a widespread cold‐adapted ant, Prenolepis imparis
inferred← citeshttps://doi.org/10.1146/annurev-ecolsys-102221-050029openalex-snapshot
Sky Islands Are a Global Tool for Predicting the Ecological and Evolutionary Consequences of Climate Change
inferred← citeshttps://doi.org/10.1636/joa-s-20-040openalex-snapshot
Restriction enzyme optimization for RADseq with camel spiders (Arachnida: Solifugae)
inferred← citeshttps://doi.org/10.1894/swnat-d-23-00038openalex-snapshot
BIOGEOGRAPHY OF MENTZELIA THOMPSONII AND RELATED SPECIES (LOASACEAE)
inferred← citeshttps://doi.org/10.3389/frchs.2024.1445731openalex-snapshot
What does the history of Theraphosidae systematics tell us about the future of tarantula taxonomy?
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Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.