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Unforeseen Consequences of Excluding Missing Data from Next-Generation Sequences: Simulation Study of RAD Sequences
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s004380050374openalex-snapshot
Differences in DNA methylation patterns are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms
inferredcites →https://doi.org/10.1016/0025-5564(81)90043-2openalex-snapshot
Comparison of phylogenetic trees
inferredcites →https://doi.org/10.1016/j.jbi.2005.04.001openalex-snapshot
Missing data and the design of phylogenetic analyses
inferredcites →https://doi.org/10.1016/j.ympev.2006.05.025openalex-snapshot
Molecular phylogeny of the Arctoidea (Carnivora): Effect of missing data on supertree and supermatrix analyses of multiple gene data sets
inferredcites →https://doi.org/10.1016/j.ympev.2011.10.012openalex-snapshot
Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences
inferredcites →https://doi.org/10.1016/j.ympev.2012.07.004openalex-snapshot
Full modeling versus summarizing gene-tree uncertainty: Method choice and species-tree accuracy
inferredcites →https://doi.org/10.1016/j.ympev.2013.06.004openalex-snapshot
Effects of missing data on species tree estimation under the coalescent
inferredcites →https://doi.org/10.1038/nrg2986openalex-snapshot
Genotype and SNP calling from next-generation sequencing data
inferredcites →https://doi.org/10.1073/pnas.1006538107openalex-snapshot
Resolving postglacial phylogeography using high-throughput sequencing
inferredcites →https://doi.org/10.1080/10635150390218330openalex-snapshot
Missing Data, Incomplete Taxa, and Phylogenetic Accuracy
inferredcites →https://doi.org/10.1080/10635150500354928openalex-snapshot
Inferring Phylogeny Despite Incomplete Lineage Sorting
inferredcites →https://doi.org/10.1080/10635150802429642openalex-snapshot
A Rapid Bootstrap Algorithm for the RAxML Web Servers
inferredcites →https://doi.org/10.1089/cmb.2011.0174openalex-snapshot
Algorithms for MDC-Based Multi-Locus Phylogeny Inference: Beyond Rooted Binary Gene Trees on Single Alleles
inferredcites →https://doi.org/10.1093/bioinformatics/13.3.235openalex-snapshot
Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/18.2.337openalex-snapshot
Generating samples under a Wright–Fisher neutral model of genetic variation
inferredcites →https://doi.org/10.1093/genetics/122.4.957openalex-snapshot
Gene genealogy in three related populations: consistency probability between gene and population trees.
inferredcites →https://doi.org/10.1093/molbev/msh156openalex-snapshot
An Assessment of Accuracy, Error, and Conflict with Support Values from Genome-Scale Phylogenetic Data
inferredcites →https://doi.org/10.1093/molbev/msp274openalex-snapshot
Bayesian Inference of Species Trees from Multilocus Data
inferredcites →https://doi.org/10.1093/molbev/mss208openalex-snapshot
Impact of Missing Data on Phylogenies Inferred from Empirical Phylogenomic Data Sets
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040258openalex-snapshot
Sampling properties of DNA sequence data in phylogenetic analysis.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot
Relationships between gene trees and species trees.
inferredcites →https://doi.org/10.1093/sysbio/44.4.501openalex-snapshot
Coping with Abundant Missing Entries in Phylogenetic Inference Using Parsimony
inferredcites →https://doi.org/10.1093/sysbio/syq047openalex-snapshot
Sources of Error Inherent in Species-Tree Estimation: Impact of Mutational and Coalescent Effects on Accuracy and Implications for Choosing among Different Methods
inferredcites →https://doi.org/10.1093/sysbio/sys004openalex-snapshot
Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales
inferredcites →https://doi.org/10.1093/sysbio/sys048openalex-snapshot
Deep Phylogeographic Structure and Environmental Differentiation in the Carnivorous Plant Sarracenia alata
inferredcites →https://doi.org/10.1093/sysbio/sys049openalex-snapshot
Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics
inferredcites →https://doi.org/10.1093/sysbio/syt032openalex-snapshot
Inferring Phylogeny and Introgression using RADseq Data: An Example from Flowering Plants (Pedicularis: Orobanchaceae)
inferredcites →https://doi.org/10.1093/sysbio/syt061openalex-snapshot
Target Capture and Massively Parallel Sequencing of Ultraconserved Elements for Comparative Studies at Shallow Evolutionary Time Scales
inferredcites →https://doi.org/10.1111/1755-0998.12136openalex-snapshot
Identification of SNP markers for inferring phylogeny in temperate bamboos ( P oaceae: B ambusoideae) using RAD sequencing
inferredcites →https://doi.org/10.1111/j.1755-0998.2011.03005.xopenalex-snapshot
PRG matic : an efficient pipeline for collating genome‐enriched second‐generation sequencing data using a ‘provisional‐reference genome’
inferredcites →https://doi.org/10.1111/mec.12023openalex-snapshot
Genome‐wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the L ake V ictoria cichlid adaptive radiation
inferredcites →https://doi.org/10.1111/mec.12105openalex-snapshot
Population genomics based on low coverage sequencing: how low should we go?
inferredcites →https://doi.org/10.1111/mec.12276openalex-snapshot
RAD seq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
inferredcites →https://doi.org/10.1146/annurev.ecolsys.33.010802.150511openalex-snapshot
The (Super)Tree of Life: Procedures, Problems, and Prospects
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1371/journal.pone.0003376openalex-snapshot
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
inferredcites →https://doi.org/10.1371/journal.pone.0033394openalex-snapshot
Inferring Phylogenies from RAD Sequence Data
inferredcites →https://doi.org/10.1534/g3.111.000240openalex-snapshot
Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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RADdesigner: a workflow to select the optimal sequencing methodology in genotyping experiments on woody plant species
inferred← citeshttps://doi.org/10.1007/s12686-018-1050-zopenalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.hpj.2022.11.010openalex-snapshot
RAD-seq data reveals robust phylogeny and morphological evolutionary history of Rhododendron
inferred← citeshttps://doi.org/10.1016/j.margen.2015.10.010openalex-snapshot
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inferred← citeshttps://doi.org/10.1038/s41437-021-00442-9openalex-snapshot
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Genome-wide RAD sequencing data provide unprecedented resolution of the phylogeny of temperate bamboos (Poaceae: Bambusoideae)
inferred← citeshttps://doi.org/10.1038/s41598-017-16810-7openalex-snapshot
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inferred← citeshttps://doi.org/10.1038/s41598-020-79778-xopenalex-snapshot
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Orthoptera-specific target enrichment (OR-TE) probes resolve relationships over broad phylogenetic scales
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SDN helps Big Data to optimize access to data
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Effective application of next-generation sequencing (NGS) approaches in systematics and population genetics: case studies in Eucalyptus and Acacia
inferred← citeshttps://doi.org/10.1080/00028487.2017.1356373openalex-snapshot
Genomic Analysis Reveals Genetic Distinctiveness of the Paiute Cutthroat Trout Oncorhynchus clarkii seleniris
inferred← citeshttps://doi.org/10.1080/0028825x.2021.1960567openalex-snapshot
Phylogenomic analyses reveal a history of hybridisation and introgression between Sophora sect. Edwardsia (Fabaceae) species in New Zealand
inferred← citeshttps://doi.org/10.1080/09670262.2018.1441446openalex-snapshot
High-throughput sequencing for algal systematics
inferred← citeshttps://doi.org/10.1093/bioinformatics/btz473openalex-snapshot
DepthFinder: a tool to determine the optimal read depth for reduced-representation sequencing
inferred← citeshttps://doi.org/10.1093/biolinnean/blab095openalex-snapshot
Plotting for change: an analytical framework to aid decisions on which lineages are candidate species in phylogenomic species discovery
inferred← citeshttps://doi.org/10.1093/cz/zoac066openalex-snapshot
Urbanization drives adaptive evolution in a Neotropical bird
inferred← citeshttps://doi.org/10.1093/evolut/qpaf059openalex-snapshot
Genomic discordance throws a wrench in the parallel speciation hypothesis for scincid lizards
inferred← citeshttps://doi.org/10.1093/g3journal/jkab307openalex-snapshot
Genomic signatures of inbreeding in a critically endangered parrot, the kākāpō
inferred← citeshttps://doi.org/10.1093/gbe/evaa113openalex-snapshot
Uneven Missing Data Skew Phylogenomic Relationships within the Lories and Lorikeets
inferred← citeshttps://doi.org/10.1093/gbe/evab112openalex-snapshot
HyRAD-X Exome Capture Museomics Unravels Giant Ground Beetle Evolution
inferred← citeshttps://doi.org/10.1093/gbe/evab200openalex-snapshot
Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( Gila robusta Complex) in the Colorado River
inferred← citeshttps://doi.org/10.1093/gbe/evag124openalex-snapshot
Genomic Footprints of Selfing, Introduction History, and Long-Distance Dispersal in an Invasive Alien Plant
inferred← citeshttps://doi.org/10.1093/gbe/evv026openalex-snapshot
Phylogenomics of Phrynosomatid Lizards: Conflicting Signals from Sequence Capture versus Restriction Site Associated DNA Sequencing
inferred← citeshttps://doi.org/10.1093/genetics/iyaf212openalex-snapshot
Chimeric reference panels for genomic imputation
inferred← citeshttps://doi.org/10.1093/jhered/esad062openalex-snapshot
Patterns of reproduction and autozygosity distinguish the breeding from nonbreeding gray wolves of Yellowstone National Park
inferred← citeshttps://doi.org/10.1093/molbev/msab316openalex-snapshot
The Complex History of Genome Duplication and Hybridization in North American Gray Treefrogs
inferred← citeshttps://doi.org/10.1093/molbev/msac215openalex-snapshot
Weighting by Gene Tree Uncertainty Improves Accuracy of Quartet-based Species Trees
inferred← citeshttps://doi.org/10.1093/molbev/msv027openalex-snapshot
Reconstructing (Super)Trees from Data Sets with Missing Distances: Not All Is Lost
inferred← citeshttps://doi.org/10.1093/molbev/msv347openalex-snapshot
Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes)
inferred← citeshttps://doi.org/10.1093/molbev/msx261openalex-snapshot
Fragmentary Gene Sequences Negatively Impact Gene Tree and Species Tree Reconstruction
inferred← citeshttps://doi.org/10.1093/ornithology/ukag028openalex-snapshot
Phylogenetic relationships, hybridization, and genetic structuring in “Cassidix” grackles
inferred← citeshttps://doi.org/10.1093/sysbio/syab027openalex-snapshot
Six-State Amino Acid Recoding is not an Effective Strategy to Offset Compositional Heterogeneity and Saturation in Phylogenetic Analyses
inferred← citeshttps://doi.org/10.1093/sysbio/syab057openalex-snapshot
Phylogenomic Species Delimitation Dramatically Reduces Species Diversity in an Antarctic Adaptive Radiation
inferred← citeshttps://doi.org/10.1093/sysbio/syad065openalex-snapshot
Reference Genome Choice and Filtering Thresholds Jointly Influence Phylogenomic Analyses
inferred← citeshttps://doi.org/10.1093/sysbio/syad073openalex-snapshot
Alpine Extremophytes in Evolutionary Turmoil: Complex Diversification Patterns and Demographic Responses of a Halophilic Grass in a Central Asian Biodiversity Hotspot
inferred← citeshttps://doi.org/10.1093/sysbio/syv029openalex-snapshot
The Challenges of Resolving a Rapid, Recent Radiation: Empirical and Simulated Phylogenomics of Philippine Shrews
inferred← citeshttps://doi.org/10.1093/sysbio/syv053openalex-snapshot
Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies
inferred← citeshttps://doi.org/10.1093/sysbio/syv058openalex-snapshot
How Should Genes and Taxa be Sampled for Phylogenomic Analyses with Missing Data? An Empirical Study in Iguanian Lizards
inferred← citeshttps://doi.org/10.1093/sysbio/syw027openalex-snapshot
Phylogenomics for Systematic Biology
inferred← citeshttps://doi.org/10.1093/sysbio/syw036openalex-snapshot
Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics
inferred← citeshttps://doi.org/10.1093/sysbio/syw092openalex-snapshot
Misconceptions on Missing Data in RAD-seq Phylogenetics with a Deep-scale Example from Flowering Plants
inferred← citeshttps://doi.org/10.1093/sysbio/syw114openalex-snapshot
How Do Cold-Adapted Plants Respond to Climatic Cycles? Interglacial Expansion Explains Current Distribution and Genomic Diversity in Primula farinosa L.
inferred← citeshttps://doi.org/10.1093/sysbio/syx050openalex-snapshot
Resolving Rapid Radiations within Angiosperm Families Using Anchored Phylogenomics
inferred← citeshttps://doi.org/10.1093/sysbio/syx062openalex-snapshot
Resolving Recent Plant Radiations: Power and Robustness of Genotyping-by-Sequencing
inferred← citeshttps://doi.org/10.1093/sysbio/syx077openalex-snapshot
To Include or Not to Include: The Impact of Gene Filtering on Species Tree Estimation Methods
inferred← citeshttps://doi.org/10.1093/sysbio/syx089openalex-snapshot
An In Silico Comparison of Protocols for Dated Phylogenomics
inferred← citeshttps://doi.org/10.1093/sysbio/syy029openalex-snapshot
Information Dropout Patterns in Restriction Site Associated DNA Phylogenomics and a Comparison with Multilocus Sanger Data in a Species-Rich Moth Genus
inferred← citeshttps://doi.org/10.1093/sysbio/syy064openalex-snapshot
Impacts of Inference Method and Data set Filtering on Phylogenomic Resolution in a Rapid Radiation of Ground Squirrels (Xerinae: Marmotini)
inferred← citeshttps://doi.org/10.1093/sysbio/syy085openalex-snapshot
Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting
inferred← citeshttps://doi.org/10.1098/rsos.200603openalex-snapshot
Gene flow in the Antarctic bivalve Aequiyoldia eightsii (Jay, 1839) suggests a role for the Antarctic Peninsula Coastal Current in larval dispersal
inferred← citeshttps://doi.org/10.1098/rspb.2017.0300openalex-snapshot
A genetic legacy of introgression confounds phylogeny and biogeography in oaks
inferred← citeshttps://doi.org/10.1098/rspb.2017.0537openalex-snapshot
The complex effects of demographic history on the estimation of substitution rate: concatenated gene analysis results in no more than twofold overestimation
inferred← citeshttps://doi.org/10.1098/rspb.2019.1311openalex-snapshot
The conundrum of species delimitation: a genomic perspective on a mitogenetically super-variable butterfly
inferred← citeshttps://doi.org/10.1098/rspb.2020.2102openalex-snapshot
Target-capture phylogenomics provide insights on gene and species tree discordances in Old World treefrogs (Anura: Rhacophoridae)
inferred← citeshttps://doi.org/10.1101/032565openalex-snapshot
An in silico comparison of reduced-representation and sequence-capture protocols for phylogenomics
inferred← citeshttps://doi.org/10.1101/110296openalex-snapshot
Resolving Rapid Radiations Within Angiosperm Families Using Anchored Phylogenomics
inferred← citeshttps://doi.org/10.1101/2020.11.14.383240openalex-snapshot
Inherent population structure determines the importance of filtering parameters for reduced representation sequencing analyses
inferred← citeshttps://doi.org/10.1101/2021.05.04.442552openalex-snapshot
Population genomics of Pocillopora corals: insights from RAD-sequencing
inferred← citeshttps://doi.org/10.1101/2021.11.04.467341openalex-snapshot
Conservation Genomics of Urban Populations of Streamside Salamander ( Ambystoma barbouri )
inferred← citeshttps://doi.org/10.1101/440289openalex-snapshot
Reduced representation sequencing for symbiotic anthozoans: are reference genomes necessary to eliminate endosymbiont contamination and make robust phylogeographic inference?
inferred← citeshttps://doi.org/10.1101/692509openalex-snapshot
Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( Gila robusta complex) in the Colorado River
inferred← citeshttps://doi.org/10.1109/bibm66473.2025.11357096openalex-snapshot
Missing Data Imputation Method for Phylogenetic Trees Based on Singular Value Decomposition and Denoising Autoencoder
inferred← citeshttps://doi.org/10.1109/jcsse.2019.8864151openalex-snapshot
A Linear-time Algorithm for Optimal Tree Completion
inferred← citeshttps://doi.org/10.1109/tcbb.2018.2884459openalex-snapshot
imPhy: Imputing Phylogenetic Trees with Missing Information Using Mathematical Programming
inferred← citeshttps://doi.org/10.1111/1755-0998.12695openalex-snapshot
Cross‐platform compatibility of de novo‐aligned SNP s in a nonmodel butterfly genus
inferred← citeshttps://doi.org/10.1111/1755-0998.12921openalex-snapshot
Reconstructing phylogeny from reduced‐representation genome sequencing data without assembly or alignment
inferred← citeshttps://doi.org/10.1111/1755-0998.13029openalex-snapshot
An empirical pipeline for choosing the optimal clustering threshold in RADseq studies
inferred← citeshttps://doi.org/10.1111/1755-0998.13031openalex-snapshot
RAD‐sequencing for estimating genomic relatedness matrix‐based heritability in the wild: A case study in roe deer
inferred← citeshttps://doi.org/10.1111/1755-0998.13350openalex-snapshot
The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( Terrapene spp.)
inferred← citeshttps://doi.org/10.1111/1755-0998.13482openalex-snapshot
Pseudoreplication in genomic‐scale data sets
inferred← citeshttps://doi.org/10.1111/1755-0998.13498openalex-snapshot
Nonrandom missing data can bias Principal Component Analysis inference of population genetic structure
inferred← citeshttps://doi.org/10.1111/1755-0998.13947openalex-snapshot
Estimates of heterozygosity from single nucleotide polymorphism markers are context‐dependent and often wrong
inferred← citeshttps://doi.org/10.1111/1755-0998.13993openalex-snapshot
Next‐generation bioinformatics: An ultrafast and user‐friendly tool for phylogenomic data exploration
inferred← citeshttps://doi.org/10.1111/1755-0998.14039openalex-snapshot
That's Not a Hybrid: How to Distinguish Patterns of Admixture and Isolation By Distance
inferred← citeshttps://doi.org/10.1111/1755-0998.70079openalex-snapshot
Variant Calling in the Goldilocks Zone: How Reference Genome Choice and Read Mapping Stringency Impact Heterozygosity Estimates and Phylogenetic Analyses
inferred← citeshttps://doi.org/10.1111/1755-0998.70184openalex-snapshot
Umbilical Cord: A Non‐Invasive DNA Source for Sea Turtle Genomics
inferred← citeshttps://doi.org/10.1111/2041-210x.13034openalex-snapshot
A cost‐and‐time effective procedure to develop SNP markers for multiple species: A support for community genetics
inferred← citeshttps://doi.org/10.1111/2041-210x.13562openalex-snapshot
Removing the bad apples: A simple bioinformatic method to improve loci‐recovery in de novo RADseq data for non‐model organisms
inferred← citeshttps://doi.org/10.1111/2041-210x.13790openalex-snapshot
Rapid alignment updating with Extensiphy
inferred← citeshttps://doi.org/10.1111/2041-210x.70117openalex-snapshot
Identifying genomic adaptation to local climate using a mechanistic evolutionary model
inferred← citeshttps://doi.org/10.1111/cla.12493openalex-snapshot
Phylogenomics and loci dropout patterns of deeply diverged Zodarion ant‐eating spiders suggest a high potential of RAD‐seq for genus‐level spider phylogenetics
inferred← citeshttps://doi.org/10.1111/ddi.70273openalex-snapshot
Repurposing Legacy Reduced‐Representation Genomic Datasets for Conservation Biogeography: Lessons From Hercules Beetles Across Neotropical Ecoregions
inferred← citeshttps://doi.org/10.1111/eva.12569openalex-snapshot
Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation
inferred← citeshttps://doi.org/10.1111/eva.13233openalex-snapshot
Spatial population genetics in heavily managed species: Separating patterns of historical translocation from contemporary gene flow in white‐tailed deer
inferred← citeshttps://doi.org/10.1111/eva.13650openalex-snapshot
Ex situ conservation of two rare oak species using microsatellite and SNP markers
inferred← citeshttps://doi.org/10.1111/evo.12667openalex-snapshot
Genomic tests of the species-pump hypothesis: Recent island connectivity cycles drive population divergence but not speciation in Caribbean crickets across the Virgin Islands
inferred← citeshttps://doi.org/10.1111/evo.13251openalex-snapshot
Consequences of divergence and introgression for speciation in Andean cloud forest birds
inferred← citeshttps://doi.org/10.1111/evo.13384openalex-snapshot
Linking micro‐ and macroevolutionary perspectives to evaluate the role of Quaternary sea‐level oscillations in island diversification
inferred← citeshttps://doi.org/10.1111/jbi.13114openalex-snapshot
Pleistocene climatic fluctuations drive isolation and secondary contact in the red diamond rattlesnake ( Crotalus ruber ) in Baja California
inferred← citeshttps://doi.org/10.1111/jbi.13468openalex-snapshot
Evolving in isolation: Genetic tests reject recent connections of Amazonian savannas with the central Cerrado
inferred← citeshttps://doi.org/10.1111/jbi.13676openalex-snapshot
Testing main Amazonian rivers as barriers across time and space within widespread taxa
inferred← citeshttps://doi.org/10.1111/jbi.13723openalex-snapshot
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains
inferred← citeshttps://doi.org/10.1111/jbi.14362openalex-snapshot
Nuclear phylogeography reveals strong impacts of gene flow in big brown bats
inferred← citeshttps://doi.org/10.1111/jbi.14523openalex-snapshot
Linking environmental stability with genetic diversity and population structure in two Atlantic Forest palm trees
inferred← citeshttps://doi.org/10.1111/jbi.70345openalex-snapshot
Phylogenomics of Musa acuminata subsp. banksii Elucidates Its Biogeographic History in New Guinea and Ancient, Natural Dispersal to Australia
inferred← citeshttps://doi.org/10.1111/jse.12174openalex-snapshot
Using nuclear gene data for plant phylogenetics: Progress and prospects II. Next‐gen approaches
inferred← citeshttps://doi.org/10.1111/jse.12493openalex-snapshot
Different filtering strategies of genotyping‐by‐sequencing data provide complementary resolutions of species boundaries and relationships in a clade of sexually deceptive orchids
inferred← citeshttps://doi.org/10.1111/jse.12724openalex-snapshot
Assessing the sensitivity of divergence time estimates to locus sampling, calibration points, and model priors in a RAD‐seq phylogeny of Carex section Schoenoxiphium
inferred← citeshttps://doi.org/10.1111/jse.12725openalex-snapshot
Species delimitation of North AmericanNyssaspecies
inferred← citeshttps://doi.org/10.1111/jse.12928openalex-snapshot
Excessive and asymmetrical removal of heterozygous sites by maxSH biases downstream population genetic inference: Implications for hybridization between two primroses
inferred← citeshttps://doi.org/10.1111/jse.13010openalex-snapshot
Resolving relationships despite past hybridization in Aliciella subsection Subnuda (Polemoniaceae)
inferred← citeshttps://doi.org/10.1111/mec.13145openalex-snapshot
Disentangling the complex evolutionary history of the Western Palearctic blue tits (Cyanistes spp.) – phylogenomic analyses suggest radiation by multiple colonization events and subsequent isolation
inferred← citeshttps://doi.org/10.1111/mec.13314openalex-snapshot
Distinguishing noise from signal in patterns of genomic divergence in a highly polymorphic avian radiation
inferred← citeshttps://doi.org/10.1111/mec.13546openalex-snapshot
Phylogenomics at the tips: inferring lineages and their demographic history in a tropical lizard, Carlia amax
inferred← citeshttps://doi.org/10.1111/mec.13707openalex-snapshot
Genomic data reveal ancient microendemism in forest scorpions across the California Floristic Province
inferred← citeshttps://doi.org/10.1111/mec.13735openalex-snapshot
Contrasting support for alternative models of genomic variation based on microhabitat preference: species‐specific effects of climate change in alpine sedges
inferred← citeshttps://doi.org/10.1111/mec.13988openalex-snapshot
Genomic data detect corresponding signatures of population size change on an ecological time scale in two salamander species
inferred← citeshttps://doi.org/10.1111/mec.14028openalex-snapshot
Rapid genetic and morphologic divergence between captive and wild populations of the endangered Leon Springs pupfish, Cyprinodon bovinus
inferred← citeshttps://doi.org/10.1111/mec.14223openalex-snapshot
Demographic model selection using random forests and the site frequency spectrum
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