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Ancient mitochondrial and modern whole genomes unravel massive genetic diversity loss during near extinction of Alpine ibex
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Late Pleistocene and Holocene History of Mammals in Europe
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Recovery of alpine ibex from near extinction: the result of effective protection, captive breeding, and reintroductions
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Complete Genomes Reveal Signatures of Demographic and Genetic Declines in the Woolly Mammoth
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Historical Genomes Reveal the Genomic Consequences of Recent Population Decline in Eastern Gorillas
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Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages
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Middle Pleistocene genome calibrates a revised evolutionary history of extinct cave bears
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In D-loop: 40years of mitochondrial 7S DNA
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Late Pleistocene – Holocene surface processes and landscape evolution in the central Swiss Alps
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Demographic inference using genetic data from a single individual: Separating population size variation from population structure
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Quantifying Temporal Genomic Erosion in Endangered Species
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Inbreeding effects in wild populations
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Rapid range shifts and megafaunal extinctions associated with late Pleistocene climate change
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Climate change, not human population growth, correlates with Late Quaternary megafauna declines in North America
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Increased autumn and winter precipitation during the Last Glacial Maximum in the European Alps
inferredcites →https://doi.org/10.1038/s41559-019-0968-1openalex-snapshot
Inbreeding reduces long-term growth of Alpine ibex populations
inferredcites →https://doi.org/10.1038/s41598-019-47073-zopenalex-snapshot
Large-scale mitogenomic analysis of the phylogeography of the Late Pleistocene cave bear
inferredcites →https://doi.org/10.1046/j.1365-294x.2003.01702.xopenalex-snapshot
Y chromosome conserved anchored tagged sequences (YCATS) for the analysis of mammalian male‐specific DNA
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Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments
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fastsimcoal2 : demographic inference under complex evolutionary scenarios
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Fast and accurate short read alignment with Burrows–Wheeler transform
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The Sequence Alignment/Map format and SAMtools
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The variant call format and VCFtools
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mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters
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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
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Gene Genealogies in a Metapopulation
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inferredcites →https://doi.org/10.1093/molbev/msi103openalex-snapshot
Bayesian Coalescent Inference of Past Population Dynamics from Molecular Sequences
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Spatiotemporal Dynamics of Genetic Variation in the Iberian Lynx along Its Path to Extinction Reconstructed with Ancient DNA
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Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
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Bushmeat hunting and extinction risk to the world's mammals
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inferredcites →https://doi.org/10.1098/rstb.2019.0212openalex-snapshot
Consequences of past climate change and recent human persecution on mitogenomic diversity in the arctic fox
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Illumina Sequencing Library Preparation for Highly Multiplexed Target Capture and Sequencing
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PSMC (pairwise sequentially Markovian coalescent) analysis of RAD (restriction site associated DNA) sequencing data
inferredcites →https://doi.org/10.1111/1755-0998.13452openalex-snapshot
A robust sequencing assay of a thousand amplicons for the high‐throughput population monitoring of Alpine ibex immunogenetics
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IUCN Red List protects avian genetic diversity
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Process‐explicit models reveal pathway to extinction for woolly mammoth using pattern‐oriented validation
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Population genomics analyses of European ibex species show lower diversity and higher inbreeding in reintroduced populations
inferredcites →https://doi.org/10.1111/eva.12575openalex-snapshot
Heterozygosity–fitness correlation at the major histocompatibility complex despite low variation in Alpine ibex (Capra ibex)
inferredcites →https://doi.org/10.1111/eva.12691openalex-snapshot
Deleterious alleles in the context of domestication, inbreeding, and selection
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Genetic consequences of long‐term small effective population size in the critically endangered pygmy hog
inferredcites →https://doi.org/10.1111/j.1095-8312.2005.00415.xopenalex-snapshot
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Mitochondrial D‐loop variations in paediatric acute myeloid leukaemia: a potential prognostic marker
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Biology, ecology and status of Iberian ibex Capra pyrenaica: a critical review and research prospectus
inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04420.xopenalex-snapshot
A strong genetic footprint of the re‐introduction history of Alpine ibex (Capra ibex ibex)
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05664.xopenalex-snapshot
The biogeography of mitochondrial and nuclear discordance in animals
inferredcites →https://doi.org/10.1111/j.2041-210x.2011.00129.xopenalex-snapshot
TempNet: a method to display statistical parsimony networks for heterochronous DNA sequence data
inferredcites →https://doi.org/10.1111/mam.12169openalex-snapshot
Inbreeding in natural mammal populations: historical perspectives and future challenges
inferredcites →https://doi.org/10.1111/mam.12194openalex-snapshot
Distribution, status, and recent population dynamics of Alpine ibex Capra ibex in Europe
inferredcites →https://doi.org/10.1111/mec.13496openalex-snapshot
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inferredcites →https://doi.org/10.1111/mec.13540openalex-snapshot
PSMC analysis of effective population sizes in molecular ecology and its application to black‐and‐whiteFicedulaflycatchers
inferredcites →https://doi.org/10.1111/mec.16166openalex-snapshot
Population dynamics of caribou shaped by glacial cycles before the last glacial maximum
inferredcites →https://doi.org/10.1111/mec.16503openalex-snapshot
Ancient mitochondrial and modern whole genomes unravel massive genetic diversity loss during near extinction of Alpine ibex
inferredcites →https://doi.org/10.1126/sciadv.1400253openalex-snapshot
Accelerated modern human–induced species losses: Entering the sixth mass extinction
inferredcites →https://doi.org/10.1126/sciadv.aaz5216openalex-snapshot
The origin of domestication genes in goats
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Ancient DNA: Do It Right or Not at All
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Ancient goat genomes reveal mosaic domestication in the Fertile Crescent
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Late Quaternary Extinctions: State of the Debate
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Late-Holocene land-use history and environmental changes at the high altitudes of St Antönien (Switzerland, Northern Alps): Combined evidence from pollen, soil and tree-ring analyses
inferredcites →https://doi.org/10.1177/0959683616658523openalex-snapshot
Neolithic to Bronze Age (4850–3450 cal. BP) fire management of the Alpine Lower Engadine landscape (Switzerland) to establish pastures and cereal fields
inferredcites →https://doi.org/10.1186/s12859-014-0356-4openalex-snapshot
ANGSD: Analysis of Next Generation Sequencing Data
inferredcites →https://doi.org/10.1186/s12862-017-0890-6openalex-snapshot
bModelTest: Bayesian phylogenetic site model averaging and model comparison
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Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
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BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
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Introgression from Domestic Goat Generated Variation at the Major Histocompatibility Complex of Alpine Ibex
inferredcites →https://doi.org/10.1371/journal.pone.0062992openalex-snapshot
The Confounding Effect of Population Structure on Bayesian Skyline Plot Inferences of Demographic History
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Ancient and Contemporary DNA Reveal a Pre-Human Decline but No Population Bottleneck Associated with Recent Human Persecution in the Kea (Nestor notabilis)
inferredcites →https://doi.org/10.1371/journal.pone.0170827openalex-snapshot
Molecular Analyses Reveal Unexpected Genetic Structure in Iberian Ibex Populations
inferredcites →https://doi.org/10.2193/2005-675openalex-snapshot
Influence of the Kid on Space Use and Habitat Selection of Female Alpine Ibex
inferredcites →https://doi.org/10.4000/rga.1359openalex-snapshot
Migration in the Swiss Alps and Swiss Jura from the Middle Ages to the mid-20th century: a brief review
inferredcites →https://doi.org/10.48550/arxiv.1303.3997openalex-snapshot
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
inferredcites →https://doi.org/10.5194/tc-12-3265-2018openalex-snapshot
Modelling last glacial cycle ice dynamics in the Alps
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/nhcm.2.161331zenodo-depositor-declared
Museomics, the Extended Specimen and Collectomics – how to frame and name the diversity of information linked to specimens in natural history collections
inferred← citeshttps://doi.org/10.1016/j.isci.2023.107811openalex-snapshot
Adaptation to the High-Arctic island environment despite long-term reduced genetic variation in Svalbard reindeer
inferred← citeshttps://doi.org/10.1038/s41586-024-08112-6openalex-snapshot
The genomic natural history of the aurochs
inferred← citeshttps://doi.org/10.1038/s41598-025-32389-wopenalex-snapshot
Ecology and demographic structure of an extinct ibex population in late Upper Palaeolithic Italian Alps
inferred← citeshttps://doi.org/10.1038/s42003-023-05385-xopenalex-snapshot
Range-wide and temporal genomic analyses reveal the consequences of near-extinction in Swedish moose
inferred← citeshttps://doi.org/10.1080/24701394.2026.2739858openalex-snapshot
Two ancient mitochondrial genomes belonging to the Siberian roe deer ( Capreolus pygargus ) from Northern China reveal regional genetic structure of populations
inferred← citeshttps://doi.org/10.1093/molbev/msae038openalex-snapshot
Genomic Analyses Capture the Human-Induced Demographic Collapse and Recovery in a Wide-Ranging Cervid
inferred← citeshttps://doi.org/10.1098/rsos.240599openalex-snapshot
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inferred← citeshttps://doi.org/10.1101/2025.06.25.661461openalex-snapshot
Asian pika populations track local glaciation events through the Pleistocene
inferred← citeshttps://doi.org/10.1111/1365-2656.70031openalex-snapshot
It's time to go—Drivers and plasticity of migration phenology in a short‐distance migratory ungulate
inferred← citeshttps://doi.org/10.1111/1755-0998.70015openalex-snapshot
Historical Collections of Tropical Marine Mammals Are an Excellent Resource for Ancient DNA
inferred← citeshttps://doi.org/10.1111/jbi.70216openalex-snapshot
From Mountain Birth to Mammalian Marvels: A Review of the Himalayas' Role in Mammalian Biogeography
inferred← citeshttps://doi.org/10.1111/mec.17130openalex-snapshot
Assessing the genetic composition of cotton‐top tamarins (Saguinus oedipus) before sweeping anthropogenic impact
inferred← citeshttps://doi.org/10.1111/mec.17274openalex-snapshot
A palaeogenomic investigation of overharvest implications in an endemic wild reindeer subspecies
inferred← citeshttps://doi.org/10.1111/mec.17429openalex-snapshot
Facilitated introgression from domestic goat into Alpine ibex at immune loci
inferred← citeshttps://doi.org/10.26873/svr-1788-2023openalex-snapshot
FIRST INSIGHT INTO GENETIC DIVERSITY OF ALPINE IBEX (Capra ibex) IN SLOVENIA
inferred← citeshttps://doi.org/10.3389/fevo.2023.1218690openalex-snapshot
Molecular evolution in introduced insect species—a mitochondrial perspective
inferred← citeshttps://doi.org/10.3390/d15010016openalex-snapshot
Genetic Diversity and Population Structure Derived from Body Remains of the Endangered Flightless Longhorn Beetle Iberodorcadion fuliginator in Grassland Fragments in Central Europe
inferred← citeshttps://doi.org/10.64898/2026.06.11.731526openalex-snapshot
Ancient DNA perspectives on North American cervids identify fluctuations in genetic diversity
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