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Optogenetics in plants
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/cphc.200900894openalex-snapshot
A Brief History of Phytochromes
inferredcites →https://doi.org/10.1007/978-1-4939-3512-3_9openalex-snapshot
Optogenetics in Plants: Red/Far-Red Light Control of Gene Expression
inferredcites →https://doi.org/10.1016/j.cbpa.2018.11.010openalex-snapshot
A bright future: optogenetics to dissect the spatiotemporal control of cell behavior
inferredcites →https://doi.org/10.1016/j.copbio.2017.06.010openalex-snapshot
Synthetic biological approaches to optogenetically control cell signaling
inferredcites →https://doi.org/10.1016/j.devcel.2015.12.011openalex-snapshot
Reversible Optogenetic Control of Subcellular Protein Localization in a Live Vertebrate Embryo
inferredcites →https://doi.org/10.1016/j.tplants.2019.10.002openalex-snapshot
Structural Basis of Design and Engineering for Advanced Plant Optogenetics
inferredcites →https://doi.org/10.1021/acs.chemrev.8b00163openalex-snapshot
Blue-Light Receptors for Optogenetics
inferredcites →https://doi.org/10.1021/acssynbio.5b00004openalex-snapshot
Red Light-Regulated Reversible Nuclear Localization of Proteins in Mammalian Cells and Zebrafish
inferredcites →https://doi.org/10.1021/acssynbio.7b00450openalex-snapshot
A Green-Light-Responsive System for the Control of Transgene Expression in Mammalian and Plant Cells
inferredcites →https://doi.org/10.1021/acssynbio.8b00120openalex-snapshot
OptoBase: A Web Platform for Molecular Optogenetics
inferredcites →https://doi.org/10.1021/sb400090sopenalex-snapshot
Optogenetic Control of Protein Kinase Activity in Mammalian Cells
inferredcites →https://doi.org/10.1021/sb500305vopenalex-snapshot
Orthogonal Optogenetic Triple-Gene Control in Mammalian Cells
inferredcites →https://doi.org/10.1038/nature08241openalex-snapshot
A genetically encoded photoactivatable Rac controls the motility of living cells
inferredcites →https://doi.org/10.1038/nature08446openalex-snapshot
Spatiotemporal control of cell signalling using a light-switchable protein interaction
inferredcites →https://doi.org/10.1038/nbt.1569openalex-snapshot
Induction of protein-protein interactions in live cells using light
inferredcites →https://doi.org/10.1038/nbt734openalex-snapshot
A light-switchable gene promoter system
inferredcites →https://doi.org/10.1038/nchembio.2063openalex-snapshot
Optimized second-generation CRY2–CIB dimerizers and photoactivatable Cre recombinase
inferredcites →https://doi.org/10.1038/ncomms7898openalex-snapshot
Regulation of endogenous transmembrane receptors through optogenetic Cry2 clustering
inferredcites →https://doi.org/10.1038/nmeth.1524openalex-snapshot
Rapid blue-light–mediated induction of protein interactions in living cells
inferredcites →https://doi.org/10.1038/s41467-017-00648-8openalex-snapshot
Understanding CRY2 interactions for optical control of intracellular signaling
inferredcites →https://doi.org/10.1038/s41467-018-05882-2openalex-snapshot
Pulsatile inputs achieve tunable attenuation of gene expression variability and graded multi-gene regulation
inferredcites →https://doi.org/10.1038/s41467-019-13045-0openalex-snapshot
Molecular mechanisms underlying phytochrome-controlled morphogenesis in plants
inferredcites →https://doi.org/10.1038/s41592-018-0186-9openalex-snapshot
A light-gated potassium channel for sustained neuronal inhibition
inferredcites →https://doi.org/10.1038/s41592-020-0868-yopenalex-snapshot
Optogenetic control of gene expression in plants in the presence of ambient white light
inferredcites →https://doi.org/10.1038/s41598-017-14037-0openalex-snapshot
Photosensing and Thermosensing by Phytochrome B Require Both Proximal and Distal Allosteric Features within the Dimeric Photoreceptor
inferredcites →https://doi.org/10.1038/s42003-019-0687-9openalex-snapshot
Deconstructing and repurposing the light-regulated interplay between Arabidopsis phytochromes and interacting factors
inferredcites →https://doi.org/10.1039/c3mb70579jopenalex-snapshot
A red light-controlled synthetic gene expression switch for plant systems
inferredcites →https://doi.org/10.1073/pnas.1100262108openalex-snapshot
Structural basis of photosensitivity in a bacterial light-oxygen-voltage/helix-turn-helix (LOV-HTH) DNA-binding protein
inferredcites →https://doi.org/10.1073/pnas.1423947112openalex-snapshot
Iterative experiment design guides the characterization of a light-inducible gene expression circuit
inferredcites →https://doi.org/10.1073/pnas.1509428113openalex-snapshot
Functional and topological diversity of LOV domain photoreceptors
inferredcites →https://doi.org/10.1073/pnas.1704462114openalex-snapshot
Phototropin perceives temperature based on the lifetime of its photoactivated state
inferredcites →https://doi.org/10.1073/pnas.1902915116openalex-snapshot
Engineering the phototropin photocycle improves photoreceptor performance and plant biomass production
inferredcites →https://doi.org/10.1073/pnas.2005626117openalex-snapshot
Channelrhodopsin-mediated optogenetics highlights a central role of depolarization-dependent plant proton pumps
inferredcites →https://doi.org/10.1083/jcb.201210119openalex-snapshot
A light-triggered protein secretion system
inferredcites →https://doi.org/10.1093/mp/sss020openalex-snapshot
LOV to BLUF: Flavoprotein Contributions to the Optogenetic Toolkit
inferredcites →https://doi.org/10.1093/nar/gkt002openalex-snapshot
A red/far-red light-responsive bi-stable toggle switch to control gene expression in mammalian cells
inferredcites →https://doi.org/10.1093/nar/gkt340openalex-snapshot
Multi-chromatic control of mammalian gene expression and signaling
inferredcites →https://doi.org/10.1111/pce.13643openalex-snapshot
Cryptochromes integrate green light signals into the circadian system
inferredcites →https://doi.org/10.1126/science.1200660openalex-snapshot
Perception of UV-B by the Arabidopsis UVR8 Protein
inferredcites →https://doi.org/10.1126/science.aaa2787openalex-snapshot
Engineering of a light-gated potassium channel
inferredcites →https://doi.org/10.1126/science.aaf5656openalex-snapshot
Phytochrome B integrates light and temperature signals in Arabidopsis
inferredcites →https://doi.org/10.1126/science.aaf6005openalex-snapshot
Phytochromes function as thermosensors in Arabidopsis
inferredcites →https://doi.org/10.1126/science.aaf9030openalex-snapshot
Photoactivation and inactivation of Arabidopsis cryptochrome 2
inferredcites →https://doi.org/10.1126/science.aan5544openalex-snapshot
The form and function of channelrhodopsin
inferredcites →https://doi.org/10.1126/science.aaw0046openalex-snapshot
Optogenetic manipulation of stomatal kinetics improves carbon assimilation, water use, and growth
inferredcites →https://doi.org/10.1242/dev.175067openalex-snapshot
Principles and applications of optogenetics in developmental biology
inferredcites →https://doi.org/10.3389/fpls.2019.01433openalex-snapshot
A Fruitful Decade Using Synthetic Promoters in the Improvement of Transgenic Plants
inferredcites →https://doi.org/10.7554/elife.21646openalex-snapshot
Kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.2139/ssrn.4854568openalex-extracted
High Light-Driven Simultaneous Expression of Genes Involved in Tca Cycle and Photosynthetic Pathway Reduces the Accumulation of Succinic Acid in a Medicinal Plant Pinellia Ternata
inferred← citeshttps://doi.org/10.1002/adfm.202511627openalex-snapshot
Transparent Inorganic–Organic Bilayer Neural Electrode Array and Integration to Miniscope System for In Vivo Calcium Imaging and Electrophysiology
inferred← citeshttps://doi.org/10.1002/adsu.202100048openalex-snapshot
A Prototypical Conjugated Polymer Regulating Signaling in Plants
inferred← citeshttps://doi.org/10.1002/cpz1.577openalex-snapshot
A Short History of Plant Light Microscopy
inferred← citeshttps://doi.org/10.1002/smmd.20230026openalex-snapshot
Emerging optogenetics technologies in biomedical applications
inferred← citeshttps://doi.org/10.1007/124_2024_83openalex-snapshot
Lessons in Transport and Plant Membrane Bioengineering
inferred← citeshttps://doi.org/10.1007/978-1-0716-3044-0_23openalex-snapshot
Perspectives in Plant Abiotic Stress Signaling
inferred← citeshttps://doi.org/10.1007/s11103-025-01591-9openalex-snapshot
Engineering plant photoreceptors towards enhancing plant productivity
inferred← citeshttps://doi.org/10.1016/j.algal.2026.104733openalex-snapshot
From atoms to algae: Aureochromes in photobiology and optogenetics
inferred← citeshttps://doi.org/10.1016/j.cbpa.2022.102196openalex-snapshot
Shedding light on current trends in molecular optogenetics
inferred← citeshttps://doi.org/10.1016/j.cj.2024.04.009openalex-snapshot
Single-cell transcriptome sequencing reveals the mechanism regulating rice plumule development
inferred← citeshttps://doi.org/10.1016/j.copbio.2024.103193openalex-snapshot
Integrating bioprinting and optogenetic technologies for precision plant tissue engineering
inferred← citeshttps://doi.org/10.1016/j.cossms.2022.101023openalex-snapshot
Illuminating bacterial behaviors with optogenetics
inferred← citeshttps://doi.org/10.1016/j.jsb.2025.108283openalex-snapshot
Decoding sequence-structure-function-evolution of basic leucine zippers of aureochromes from heterokont algae
inferred← citeshttps://doi.org/10.1016/j.pbi.2022.102256openalex-snapshot
Plant optogenetics: Applications and perspectives
inferred← citeshttps://doi.org/10.1016/j.plaphy.2025.109911openalex-snapshot
Moderate shading elicits succinic acid accumulation aligning with simultaneous expression of genes involved in TCA cycle and photosynthetic pathway in a medicinal plant Pinellia ternata
inferred← citeshttps://doi.org/10.1016/j.tplants.2022.05.006openalex-snapshot
Tools for studying the cytoskeleton during plant cell division
inferred← citeshttps://doi.org/10.1016/j.tplants.2022.11.001openalex-snapshot
Calcium signaling in plant immunity: a spatiotemporally controlled symphony
inferred← citeshttps://doi.org/10.1016/j.tplants.2023.06.002openalex-snapshot
Engineering stomata for enhanced carbon capture and water-use efficiency
inferred← citeshttps://doi.org/10.1016/j.tplants.2025.01.006openalex-snapshot
Leveraging light-gated channelrhodopsins for strengthening plant physiological responses
inferred← citeshttps://doi.org/10.1016/j.tplants.2026.05.006openalex-snapshot
Phosphorylation blues: Cracking the phototropin phosphocode
inferred← citeshttps://doi.org/10.1017/qpb.2025.6openalex-snapshot
Dynamics of homeostats: the basis of electrical, chemical, hydraulic, pH and calcium signaling in plants
inferred← citeshttps://doi.org/10.1038/s41467-024-49991-7openalex-snapshot
A rapid aureochrome opto-switch enables diatom acclimation to dynamic light
inferred← citeshttps://doi.org/10.1038/s41467-026-69626-3openalex-snapshot
A red/blue optoswitch for temporal control of chloroplast transcription and biogenesis in Arabidopsis
inferred← citeshttps://doi.org/10.1038/s43586-022-00136-4openalex-snapshot
Optogenetics for light control of biological systems
inferred← citeshttps://doi.org/10.1039/d4cp02714kopenalex-snapshot
Insights into the photoswitch based on 5-deazaFMN and LOV2 from Avena sativa : a combined absorption and NMR spectroscopy study
inferred← citeshttps://doi.org/10.1093/jxb/erad167openalex-snapshot
The design of synthetic gene circuits in plants: new components, old challenges
inferred← citeshttps://doi.org/10.1093/jxb/erag270openalex-snapshot
Beyond the promoter: the case for intein-mediated protein-level control in plant biotechnology
inferred← citeshttps://doi.org/10.1093/plcell/koag136openalex-snapshot
Multiomics studies reveal how ambient temperature changes govern cellular responses of Chlamydomonas
inferred← citeshttps://doi.org/10.1093/plphys/kiab338openalex-snapshot
Advances and prospects of rhodopsin-based optogenetics in plant research
inferred← citeshttps://doi.org/10.1093/plphys/kiab364openalex-snapshot
Sensors and controllers—for and from plants
inferred← citeshttps://doi.org/10.1101/2022.10.28.514161openalex-snapshot
Highlighter: an optogenetic actuator for light-mediated, high resolution gene expression control in plants
inferred← citeshttps://doi.org/10.1101/2023.03.22.533774openalex-snapshot
Thermogenetic control of Ca 2+ levels in cells and tissues
inferred← citeshttps://doi.org/10.1101/2024.09.07.611817openalex-snapshot
Burning glass effect of water droplets triggers an ER-derived calcium response in the chloroplast stroma of Arabidopsis thaliana leaves
inferred← citeshttps://doi.org/10.1109/jproc.2021.3137077openalex-snapshot
Synthetic Morphogenesis: Introducing IEEE Journal Readers to Programming Living Mammalian Cells to Make Structures
inferred← citeshttps://doi.org/10.1111/imb.12881openalex-snapshot
Opsin diversity and evolution in the Elateroidea superfamily: Insights from transcriptome data
inferred← citeshttps://doi.org/10.1111/nph.18451openalex-snapshot
The green light gap: a window of opportunity for optogenetic control of stomatal movement
inferred← citeshttps://doi.org/10.1111/nph.18616openalex-snapshot
Introducing Transformative Plant Biotechnology
inferred← citeshttps://doi.org/10.1111/nph.20311openalex-snapshot
Light‐activated channelrhodopsins: a revolutionary toolkit for the remote control of plant signalling
inferred← citeshttps://doi.org/10.1111/pbi.70350openalex-snapshot
Engineering Conditional Transgene Expression in Nicotiana benthamiana
inferred← citeshttps://doi.org/10.1111/pce.14727openalex-snapshot
Ultraviolet‐A1 radiation induced a more favorable light‐intercepting leaf‐area display than blue light and promoted plant growth
inferred← citeshttps://doi.org/10.1111/pce.15573openalex-snapshot
Multi‐Omics Analyses Reveal the Red and Far‐Red Light Combination Enhancing Heterologous Protein and Metabolite Production in Nicotiana benthamiana
inferred← citeshttps://doi.org/10.1111/pce.70193openalex-snapshot
Incident Far‐Red Photons Drive Leaf Photosynthesis Less Efficiently Than PAR Light, but Are More Effective in Promoting Growth
inferred← citeshttps://doi.org/10.1111/plb.70019openalex-snapshot
PHS1ΔP as a promising tool to study microtubule‐related processes in plant sciences
inferred← citeshttps://doi.org/10.1111/ppl.70844openalex-snapshot
The Biological Responses to Green Light: A Step Toward Optogenetics‐Based Smart Agriculture
inferred← citeshttps://doi.org/10.1126/sciadv.aea4466openalex-snapshot
MAcro Plant Projection Imaging (MAPPI): An open, scalable platform for whole-plant fluorescence real-time imaging
inferred← citeshttps://doi.org/10.1146/annurev-arplant-071122-094840openalex-snapshot
Optogenetic Methods in Plant Biology
inferred← citeshttps://doi.org/10.1371/journal.pbio.3002303openalex-snapshot
Highlighter: An optogenetic system for high-resolution gene expression control in plants
inferred← citeshttps://doi.org/10.21203/rs.3.rs-2947310/v1openalex-snapshot
A rapid aureochrome opto-switch enables diatom acclimation to dynamic light
inferred← citeshttps://doi.org/10.2139/ssrn.5339069openalex-snapshot
Decoding Sequence-Structure-Function-Evolution of Basic Leucine Zippers of Aureochromes
inferred← citeshttps://doi.org/10.3389/fphbi.2023.1346705openalex-snapshot
New horizons in light control of plant photomorphogenesis and development
inferred← citeshttps://doi.org/10.3389/fpls.2023.1171531openalex-snapshot
Targeted single-cell gene induction by optimizing the dually regulated CRE/loxP system by a newly defined heat-shock promoter and the steroid hormone in Arabidopsis thaliana
inferred← citeshttps://doi.org/10.3389/fpls.2024.1468763openalex-snapshot
A novel toolbox to record CLE peptide signaling
inferred← citeshttps://doi.org/10.3390/su17177833openalex-snapshot
Integrating Sustainable Lighting into Urban Green Space Management: A Case Study of Light Pollution in Polish Urban Parks
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