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Metabolite profiling of non‐sterile rhizosphere soil

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/jpln.201000360openalex-snapshot

Methods of collection of plant root exudates in relation to plant metabolism and purpose: A review

inferredcites →https://doi.org/10.1007/s11104-009-9925-0openalex-snapshot

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

inferredcites →https://doi.org/10.1007/s11104-009-9953-9openalex-snapshot

Strategies and methods for studying the rhizosphere—the plant science toolbox

inferredcites →https://doi.org/10.1007/s11104-014-2283-6openalex-snapshot

The importance of a sterile rhizosphere when phenotyping for root exudation

inferredcites →https://doi.org/10.1016/j.chom.2015.01.011openalex-snapshot

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

inferredcites →https://doi.org/10.1016/j.chroma.2012.12.009openalex-snapshot

Ultra-high pressure liquid chromatography–mass spectrometry for plant metabolomics: A systematic comparison of high-resolution quadrupole-time-of-flight and single stage Orbitrap mass spectrometers

inferredcites →https://doi.org/10.1016/j.envexpbot.2012.11.007openalex-snapshot

Evaluation of a novel tool for sampling root exudates from soil-grown plants compared to conventional techniques

inferredcites →https://doi.org/10.1016/j.envpol.2009.06.032openalex-snapshot

Copper availability and bioavailability are controlled by rhizosphere pH in rape grown in an acidic Cu-contaminated soil

inferredcites →https://doi.org/10.1016/j.envpol.2010.07.029openalex-snapshot

RHIZOtest: A plant-based biotest to account for rhizosphere processes when assessing copper bioavailability

inferredcites →https://doi.org/10.1016/j.foodchem.2010.04.058openalex-snapshot

Levels of antioxidants and nutraceuticals in basil grown in hydroponics and soil

inferredcites →https://doi.org/10.1016/j.gexplo.2005.08.041openalex-snapshot

Rhizosphere: A new frontier for soil biogeochemistry

inferredcites →https://doi.org/10.1016/j.phytochem.2014.10.003openalex-snapshot

Profiling of secondary metabolites in root exudates of Arabidopsis thaliana

inferredcites →https://doi.org/10.1016/j.soilbio.2014.07.022openalex-snapshot

Root-induced changes in nutrient cycling in forests depend on exudation rates

inferredcites →https://doi.org/10.1016/j.soilbio.2014.10.007openalex-snapshot

Untargeted soil metabolomics methods for analysis of extractable organic matter

inferredcites →https://doi.org/10.1016/j.tplants.2012.04.001openalex-snapshot

The rhizosphere microbiome and plant health

inferredcites →https://doi.org/10.1016/j.tplants.2013.06.004openalex-snapshot

Mycorrhiza-induced resistance: more than the sum of its parts?

inferredcites →https://doi.org/10.1016/j.tplants.2015.12.005openalex-snapshot

New Methods To Unravel Rhizosphere Processes

inferredcites →https://doi.org/10.1016/j.tplants.2016.01.002openalex-snapshot

Engineering the Rhizosphere

inferredcites →https://doi.org/10.1016/j.tplants.2016.01.008openalex-snapshot

Metabolomics in the Rhizosphere: Tapping into Belowground Chemical Communication

inferredcites →https://doi.org/10.1021/ac051437yopenalex-snapshot

XCMS: Processing Mass Spectrometry Data for Metabolite Profiling Using Nonlinear Peak Alignment, Matching, and Identification

inferredcites →https://doi.org/10.1021/jf0484071openalex-snapshot

Structure−Activity Relationships (SAR) Studies of Benzoxazinones, Their Degradation Products and Analogues. Phytotoxicity on Standard Target Species (STS)

inferredcites →https://doi.org/10.1023/a:1020525521180openalex-snapshot

Control of Witchweed Striga hermonthica by Intercropping with Desmodium spp., and the Mechanism Defined as Allelopathic

inferredcites →https://doi.org/10.1038/nature11237openalex-snapshot

Defining the core Arabidopsis thaliana root microbiome

inferredcites →https://doi.org/10.1038/nchembio.1520openalex-snapshot

Plant perception of β-aminobutyric acid is mediated by an aspartyl-tRNA synthetase

inferredcites →https://doi.org/10.1038/srep22006openalex-snapshot

Unearthing microbial diversity of Taxus rhizosphere via MiSeq high-throughput amplicon sequencing and isolate characterization

inferredcites →https://doi.org/10.1071/fp09202openalex-snapshot

The response of barley to salinity stress differs between hydroponic and soil systems

inferredcites →https://doi.org/10.1081/e-epcs-120042072openalex-snapshot

Root Communication: The Role of Root Exudates

inferredcites →https://doi.org/10.1093/jxb/err430openalex-snapshot

The role of flavonoids in root-rhizosphere signalling: opportunities and challenges for improving plant-microbe interactions

inferredcites →https://doi.org/10.1093/jxb/erv539openalex-snapshot

Non-targeted profiling of semi-polar metabolites in Arabidopsis root exudates uncovers a role for coumarin secretion and lignification during the local response to phosphate limitation

inferredcites →https://doi.org/10.1093/nar/gkv380openalex-snapshot

MetaboAnalyst 3.0—making metabolomics more meaningful

inferredcites →https://doi.org/10.1104/pp.108.127613openalex-snapshot

Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria

inferredcites →https://doi.org/10.1104/pp.112.200386openalex-snapshot

Microbe-Associated Molecular Patterns-Triggered Root Responses Mediate Beneficial Rhizobacterial Recruitment in Arabidopsis

inferredcites →https://doi.org/10.1104/pp.15.00551openalex-snapshot

Spore Density Determines Infection Strategy by the Plant Pathogenic Fungus Plectosphaerella cucumerina

inferredcites →https://doi.org/10.1104/pp.16.00780openalex-snapshot

NAD Acts as an Integral Regulator of Multiple Defense Layers

inferredcites →https://doi.org/10.1105/tpc.010011openalex-snapshot

Growth Stage–Based Phenotypic Analysis of Arabidopsis

inferredcites →https://doi.org/10.1105/tpc.13.7.1499openalex-snapshot

Growth Stage-Based Phenotypic Analysis of Arabidopsis: A Model for High Throughput Functional Genomics in Plants

inferredcites →https://doi.org/10.1111/j.1365-2435.2008.01495.xopenalex-snapshot

New approach for capturing soluble root exudates in forest soils

inferredcites →https://doi.org/10.1111/j.1365-3040.2008.01926.xopenalex-snapshot

Regulation and function of root exudates

inferredcites →https://doi.org/10.1111/j.1461-0248.2011.01708.xopenalex-snapshot

A specialist root herbivore exploits defensive metabolites to locate nutritious tissues

inferredcites →https://doi.org/10.1111/j.1574-6941.2006.00148.xopenalex-snapshot

The Rhizosphere: ‘soil compartment influenced by the root’

inferredcites →https://doi.org/10.1111/j.1574-6941.2011.01150.xopenalex-snapshot

Effects of selected root exudate components on soil bacterial communities

inferredcites →https://doi.org/10.1111/nph.13613openalex-snapshot

Increased soil phosphorus availability induced by faba bean root exudation stimulates root growth and phosphorus uptake in neighbouring maize

inferredcites →https://doi.org/10.1111/pce.12002openalex-snapshot

Metabolomics reveals herbivore‐induced metabolites of resistance and susceptibility in maize leaves and roots

inferredcites →https://doi.org/10.1111/tpj.12465openalex-snapshot

Targeting novel chemical and constitutive primed metabolites against P lectosphaerella cucumerina

inferredcites →https://doi.org/10.1128/aem.03006-05openalex-snapshot

Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

inferredcites →https://doi.org/10.1139/m92-177openalex-snapshot

Antimicrobial activity of 2-aminophenoxazin-3-one under anaerobic conditions

inferredcites →https://doi.org/10.1155/2012/263910openalex-snapshot

MarVis-Filter: Ranking, Filtering, Adduct and Isotope Correction of Mass Spectrometry Data

inferredcites →https://doi.org/10.1186/1471-2105-10-92openalex-snapshot

MarVis: a tool for clustering and visualization of metabolic biomarkers

inferredcites →https://doi.org/10.1186/1471-2229-11-121openalex-snapshot

Citramalic acid and salicylic acid in sugar beet root exudates solubilize soil phosphorus

inferredcites →https://doi.org/10.1186/s40538-014-0023-zopenalex-snapshot

Root exudate profiling of maize seedlings inoculated with Herbaspirillum seropedicaeand humic acids

inferredcites →https://doi.org/10.1201/9781420005585.ch1openalex-snapshot

Types, Amounts, and Possible Functions of Compounds Released into the Rhizosphere by Soil-Grown Plants

inferredcites →https://doi.org/10.1371/journal.pone.0035498openalex-snapshot

Benzoxazinoids in root exudates of maize attract

inferredcites →https://doi.org/10.1371/journal.pone.0146555openalex-snapshot

The Effect of Root Exudate 7,4′-Dihydroxyflavone and Naringenin on Soil Bacterial Community Structure

inferredcites →https://doi.org/10.1371/journal.pone.0148280openalex-snapshot

Evolutionary Divergences in Root Exudate Composition among Ecologically-Contrasting Helianthus Species

inferredcites →https://doi.org/10.1529/biophysj.105.062364openalex-snapshot

Under the Influence of Alcohol: The Effect of Ethanol and Methanol on Lipid Bilayers

inferredcites →https://doi.org/10.2134/jeq2006.0136openalex-snapshot

Responses to Iron Limitation in Hordeum vulgare L. as Affected by the Atmospheric CO2 Concentration

inferredcites →https://doi.org/10.3389/fmicb.2016.00993openalex-snapshot

Impact of a Bacterial Volatile 2,3-Butanediol on Bacillus subtilis Rhizosphere Robustness

inferredcites →https://doi.org/10.3389/fpls.2013.00165openalex-snapshot

The rhizosphere revisited: root microbiomics

inferredcites →https://doi.org/10.3389/fpls.2014.00231openalex-snapshot

Disruption of the ammonium transporter AMT1.1 alters basal defenses generating resistance against Pseudomonas syringae and Plectosphaerella cucumerina

inferredcites →https://doi.org/10.3389/fpls.2014.00719openalex-snapshot

Root inoculation with Pseudomonas putida KT2440 induces transcriptional and metabolic changes and systemic resistance in maize plants

inferredcites →https://doi.org/10.4141/cjss2010-057openalex-snapshot

Response to water stress of soil enzymes and root exudates from drought and non-drought tolerant corn hybrids at different growth stages

inferredcites →https://doi.org/10.4161/psb.22655openalex-snapshot

Systemic defense priming byPseudomonas putidaKT2440 in maize depends on benzoxazinoid exudation from the roots

inferredcites →https://doi.org/10.4161/psb.28916openalex-snapshot

The plasticity of priming phenomenon activates not only common metabolomic fingerprint but also specific responses againstP. cucumerina

inferredcites →https://doi.org/10.4161/psb.4.8.9183openalex-snapshot

Expanding ecological and evolutionary insights from wild

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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The Rhizosphere Metabolome of the Resurrection Plant Myrothamnus Flabellifolia Reveals Deeply Conserved Mechanisms of Desiccation Tolerance

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Metabolites of PGPR for Chemical Signaling Pathway

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Harnessing Belowground Interaction: Re-analyzing the Role of Rhizosphere Microbiome in Plant–Pathogen Interaction Under Water Stress

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Soil-root interface influences the assembly of the endophytic bacterial community in rice plants

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Metabolome changes are induced in the arbuscular mycorrhizal fungus Gigaspora margarita by germination and by its bacterial endosymbiont

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Bacteria in (vermi)composted organic wastes mostly survive when applied to an arable soil cultivated with wheat (Triticum sp. L.)

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Populations of Populus angustifolia have evolved distinct metabolic profiles that influence their surrounding soil

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Recruitment of beneficial microbes and differential metabolites promoted Pb transport in Salix integra Thunb. after inoculation with Bacillus megaterium B6

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Targeting the untargeted: Uncovering the chemical complexity of root exudates

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Occurrence, fate, and transport of potentially toxic metals (PTMs) in an alkaline rhizosphere soil-plant (Maize, Zea mays L.) system: the role of Bacillus subtilis

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Mercury alters the rhizobacterial community in Brazilian wetlands and it can be bioremediated by the plant-bacteria association

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Se changed the component of organic chemicals and Cr bioavailability in pak choi rhizosphere soil

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Secondary Metabolite-Mediated Interactions in Mycorrhizal Symbiosis and Their Implications for Rhizosphere Microbiome Assembly and Ecosystem Functions

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Mechanistic insights on plant root colonization by bacterial endophytes: a symbiotic relationship for sustainable agriculture

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Metabolites Profiling of Humid Tropic Simulated Bungor Soil Under Biofertilizer Application

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Microbiome and Metabolomics Analysis Reveal the Interaction between Microbial Community and Metabolic Profiles in the Rhizosphere Soil of Invasive Amaranthus Palmeri

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Phenomic and metabolomic responses of roots to cadmium reveal contrasting resistance strategies in two rice cultivars (Oryza sativa L.)

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Genome sequences and genetic features of beneficial bacterial community for successful colonization in plants

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Dual column chromatography combined with high-resolution mass spectrometry improves coverage of non-targeted analysis of plant root exudates

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Combined extraction method for metabolomic and PLFA analysis of soil

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Allelopathic potential of Haloxylon ammodendron against Syntrichia caninervis and comparative analysis of soil microbial differences between inside and outside of the bare patches under its canopies

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Metabolomics approaches for the discrimination of disease suppressive soils for Rhizoctonia solani AG8 in cereal crops using 1H NMR and LC-MS

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Maize root exudate composition alters rhizosphere bacterial community to control hotspots of hydrolase activity in response to nitrogen supply

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inferred← citeshttps://doi.org/10.1021/acs.est.4c07901openalex-snapshot

Recycled Phosphorus Bioamendments from Wastewater Impact Rhizomicrobiome and Benefit Crop Growth: Sustainability Implications at Water-Food Nexus

inferred← citeshttps://doi.org/10.1021/acs.jafc.0c04245openalex-snapshot

Root-Exuded Benzoxazinoids: Uptake and Translocation in Neighboring Plants

inferred← citeshttps://doi.org/10.1021/acs.jafc.5c02003openalex-snapshot

Advances in Rhizosphere Microbiome and Rhizosphere Immunity Effect: A Review

inferred← citeshttps://doi.org/10.1021/acs.jafc.9b00747openalex-snapshot

Effect of Imidacloprid Uptake from Contaminated Soils on Vegetable Growth

inferred← citeshttps://doi.org/10.1038/s41396-019-0375-2openalex-snapshot

Metabolic regulation of the maize rhizobiome by benzoxazinoids

inferred← citeshttps://doi.org/10.1038/s41467-018-05122-7openalex-snapshot

Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota

inferred← citeshttps://doi.org/10.1038/s41467-023-37164-xopenalex-snapshot

The core metabolome and root exudation dynamics of three phylogenetically distinct plant species

inferred← citeshttps://doi.org/10.1038/s41598-019-54309-5openalex-snapshot

Root exudate composition of grass and forb species in natural grasslands

inferred← citeshttps://doi.org/10.1038/s41598-022-26551-xopenalex-snapshot

Coumarin biosynthesis genes are required after foliar pathogen infection for the creation of a microbial soil-borne legacy that primes plants for SA-dependent defenses

inferred← citeshttps://doi.org/10.1038/s41598-024-60663-wopenalex-snapshot

Assessment of induced allelopathy in crop-weed co-culture with rye-pigweed model

inferred← citeshttps://doi.org/10.1038/s43247-024-01879-6openalex-snapshot

Root exudates simultaneously form and disrupt soil organo-mineral associations

inferred← citeshttps://doi.org/10.1038/s43705-023-00217-9openalex-snapshot

Combined metagenomic and metabolomic analyses reveal that Bt rice planting alters soil C-N metabolism

inferred← citeshttps://doi.org/10.1039/c9en00137aopenalex-snapshot

Metabolomics reveals that engineered nanomaterial exposure in soil alters both soil rhizosphere metabolite profiles and maize metabolic pathways

inferred← citeshttps://doi.org/10.1073/pnas.1912130117openalex-snapshot

Rhizosphere microbiome mediates systemic root metabolite exudation by root-to-root signaling

inferred← citeshttps://doi.org/10.1073/pnas.2303439121openalex-snapshot

Nutrient and moisture limitations reveal keystone metabolites linking rhizosphere metabolomes and microbiomes

inferred← citeshttps://doi.org/10.1073/pnas.2314261121openalex-snapshot

Root-exuded specialized metabolites reduce arsenic toxicity in maize

inferred← citeshttps://doi.org/10.1080/11263504.2018.1539042openalex-snapshot

Metabolomics approach to investigate phytotoxic effects of Wedelia trilobata leaves, litter and soil

inferred← citeshttps://doi.org/10.1080/15320383.2020.1771276openalex-snapshot

Assessment of Changes on Rhizospheric Soil Microbial Biomass, Enzymes Activities and Bacterial Functional Diversity under Nickel Stress in Presence of Alfafa Plants

inferred← citeshttps://doi.org/10.1080/21645698.2022.2025725openalex-snapshot

Comparison of genetically modified insect-resistant maize and non-transgenic maize revealed changes in soil metabolomes but not in rhizosphere bacterial community

inferred← citeshttps://doi.org/10.1080/26395940.2019.1710260openalex-snapshot

Straw input can parallelly influence the bacterial and chemical characteristics of maize rhizosphere

inferred← citeshttps://doi.org/10.1093/femsec/fiz005openalex-snapshot

The known and the unknown in soil microbial ecology

inferred← citeshttps://doi.org/10.1093/hr/uhad112openalex-snapshot

Dopamine alleviates cadmium stress in apple trees by recruiting beneficial microorganisms to enhance the physiological resilience revealed by high-throughput sequencing and soil metabolomics

inferred← citeshttps://doi.org/10.1093/jxb/eraf356openalex-snapshot

An aeroponic system to characterize maize root exudates in relation to N and P nutrition and arbuscular mycorrhizal symbiosis

inferred← citeshttps://doi.org/10.1093/pcp/pcx192openalex-snapshot

Soyasaponins: A New Class of Root Exudates in Soybean (Glycine max)

inferred← citeshttps://doi.org/10.1094/pbiomes-04-20-0032-rvwopenalex-snapshot

Metabolomics, an Essential Tool in Exploring and Harnessing Microbial Chemical Ecology

inferred← citeshttps://doi.org/10.1094/pbiomes-4-3openalex-snapshot

Full Issue PDF

inferred← citeshttps://doi.org/10.1094/phyto-10-21-0418-rvwopenalex-snapshot

Genomics and Informatics, Conjoined Tools Vital for Understanding and Protecting Plant Health

inferred← citeshttps://doi.org/10.1101/2022.01.13.476280openalex-snapshot

Bulk and spatially resolved extracellular metabolomics of free-living nitrogen fixation

inferred← citeshttps://doi.org/10.1101/2022.06.20.496911openalex-snapshot

Nutrient and moisture limitation reveal keystone metabolites that link switchgrass rhizosphere metabolome and microbiome dynamics

inferred← citeshttps://doi.org/10.1101/2023.10.16.562209openalex-snapshot

Convergent and divergent responses of the rhizosphere chemistry and bacterial communities to a stress gradient in the Atacama Desert

inferred← citeshttps://doi.org/10.1101/2024.09.02.610795openalex-snapshot

Characterization of root exudates of black oat in the presence of interspecific weed species neighbours and intraspecific neighbours, and their effects on root traits

inferred← citeshttps://doi.org/10.1111/1365-2745.13630openalex-snapshot

Root functional traits explain root exudation rate and composition across a range of grassland species

inferred← citeshttps://doi.org/10.1111/1462-2920.15647openalex-snapshot

‘Cry‐for‐help’ in contaminated soil: a dialogue among plants and soil microbiome to survive in hostile conditions

inferred← citeshttps://doi.org/10.1111/1462-2920.16293openalex-snapshot

Impacts of maize hybrids with different nitrogen use efficiency on root‐associated microbiota based on distinct rhizosphere soil metabolites

inferred← citeshttps://doi.org/10.1111/aab.12673openalex-snapshot

Phosphobacteria as key actors to overcome phosphorus deficiency in plants

inferred← citeshttps://doi.org/10.1111/ele.70318openalex-snapshot

Contrast in Mycorrhizal Associations Leads to Divergent Rhizosphere Metabolomes and Plant–Soil Feedback Among Grassland Species

inferred← citeshttps://doi.org/10.1111/gcb.15089openalex-snapshot

Increased yield and CO 2 sequestration potential with the C 4 cereal Sorghum bicolor cultivated in basaltic rock dust‐amended agricultural soil

inferred← citeshttps://doi.org/10.1111/gcbb.12906openalex-snapshot

The combination of biochar and PGPBs stimulates the differentiation in rhizosphere soil microbiome and metabolites to suppress soil‐borne pathogens under consecutive monoculture regimes

inferred← citeshttps://doi.org/10.1111/mpp.13396openalex-snapshot

Metabolic variations in root tissues and rhizosphere soils of weak host plants potently lead to distinct host status and chemotaxis regulation of Meloidogyne incognita in intercropping

inferred← citeshttps://doi.org/10.1111/nph.15662openalex-snapshot

Multilab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass

inferred← citeshttps://doi.org/10.1111/nph.16223openalex-snapshot

Plant root exudation under drought: implications for ecosystem functioning

inferred← citeshttps://doi.org/10.1111/nph.19060openalex-snapshot

Species phylogeny, ecology, and root traits as predictors of root exudate composition

inferred← citeshttps://doi.org/10.1111/nph.20159openalex-snapshot

Microbiota responses to mutations affecting NO homeostasis in Arabidopsis thaliana

inferred← citeshttps://doi.org/10.1111/pce.13892openalex-snapshot

Root exudate signals in plant–plant interactions

inferred← citeshttps://doi.org/10.1111/pce.14870openalex-snapshot

Plant glucosinolate biosynthesis and breakdown pathways shape the rhizosphere bacterial/archaeal community

inferred← citeshttps://doi.org/10.1111/pce.15311openalex-snapshot

Root Exudation: An In‐Depth Experimental Guide

inferred← citeshttps://doi.org/10.1111/pce.70378openalex-snapshot

Molecular Dialogue Across Kingdoms: The Role of Trans‐Kingdom Peptides in Plant‐Associated Interactions

inferred← citeshttps://doi.org/10.1111/pce.70611openalex-snapshot

A Comparative Evaluation of Rhizosphere Metabolites Collection Methods: Impacts on Metabolic Diversity, Composition and Pathways

inferred← citeshttps://doi.org/10.1111/plb.70010openalex-snapshot

Variation in suppression of black‐grass by modern and ancestral cereal root exudates

inferred← citeshttps://doi.org/10.1111/ppl.71135openalex-snapshot

Metabolic Reprogramming in Cucumis metuliferus Roots and Rhizosphere Identifies Candidate Metabolites That Reduce Meloidogyne incognita Infection

inferred← citeshttps://doi.org/10.1111/wbm.12222openalex-snapshot

The dynamic linkage between phytotoxicity and metabolites in Wedelia trilobata soils

inferred← citeshttps://doi.org/10.1128/aem.00505-22openalex-snapshot

Bulk and Spatially Resolved Extracellular Metabolome of Free-Living Nitrogen Fixation

inferred← citeshttps://doi.org/10.1128/aem.03140-20openalex-snapshot

Responsiveness of Aromatoleum aromaticum EbN1 T to Lignin-Derived Phenylpropanoids

inferred← citeshttps://doi.org/10.1128/mbio.00846-21openalex-snapshot

Tobacco Root Endophytic Arthrobacter Harbors Genomic Features Enabling the Catabolism of Host-Specific Plant Specialized Metabolites

inferred← citeshttps://doi.org/10.1128/mra.00288-22openalex-snapshot

Microbiome of Soybean (Glycine max L.) Rhizosphere from Free State, South Africa

inferred← citeshttps://doi.org/10.1128/spectrum.01834-21openalex-snapshot

Bacterial Communities in the Rhizosphere at Different Growth Stages of Maize Cultivated in Soil Under Conventional and Conservation Agricultural Practices

inferred← citeshttps://doi.org/10.1134/s106422932260097xopenalex-snapshot

Effect of Altitude on the Release of Metabolites in the Tobacco Rhizosphere Soil

inferred← citeshttps://doi.org/10.1146/annurev-phyto-082718-095959openalex-snapshot

Surviving in a Hostile World: Plant Strategies to Resist Pests and Diseases

inferred← citeshttps://doi.org/10.1186/s12870-025-06994-wopenalex-snapshot

Application of root exudates derived from peanut/maize intercropping system promotes peanut growth and yield via modulating nitrogen turnover processes

inferred← citeshttps://doi.org/10.1186/s40168-022-01379-9openalex-snapshot

Characterization of diazotrophic root endophytes in Chinese silvergrass (Miscanthus sinensis)

inferred← citeshttps://doi.org/10.1186/s40168-023-01727-3openalex-snapshot

Unraveling the interplay between root exudates, microbiota, and rhizosheath formation in pearl millet

inferred← citeshttps://doi.org/10.1186/s40168-025-02179-7openalex-snapshot

Adaptive and metabolic convergence in rhizosphere and gut microbiomes

inferred← citeshttps://doi.org/10.12944/carj.7.2.07openalex-snapshot

Isolation and Functional Characterization of Beneficial Bacteria Associated with Roots of Thysanolaena Maxima and Rhizospheric Soil Enzymatic Activities in Jhum Agriculture

inferred← citeshttps://doi.org/10.15666/aeer/1901_395411openalex-snapshot

INFLUENCE OF ACID MINE WATER ON THE DIVERSITY AND METABOLITE SHIFT OF MICROBIAL POPULATIONS OF THE RHIZOSPHERE OF COMMON REED (PHRAGMITES AUSTRALIS)

inferred← citeshttps://doi.org/10.15835/nsb11210423openalex-snapshot

Endophytic Bacteria: Hidden Protective Associates of Plants against Biotic and Abiotic Stresses

inferred← citeshttps://doi.org/10.20944/preprints202406.0670.v1openalex-snapshot

Advancements in Metabolomics: Illuminating Plant-Microbe Interactions for Enhanced Ecosystems and Agricultural Productivity

inferred← citeshttps://doi.org/10.21203/rs.3.rs-2398806/v1openalex-snapshot

Mechanism of bare patch formation under Haloxylon ammodendron canopies and patch effects on soil microorganisms in the Gurbantunggut Desert, Northern China

inferred← citeshttps://doi.org/10.21307/jofnem-2019-063openalex-snapshot

Validation of the Chemotaxis of Plant Parasitic Nematodes Toward Host Root Exudates

inferred← citeshttps://doi.org/10.2139/ssrn.5975297openalex-snapshot

Climatic factors-driven conditions alter fine root exudation and metabolic profiles in Norway spruce

inferred← citeshttps://doi.org/10.2139/ssrn.7381462openalex-snapshot

The middle root section forms an active rhizosphere domain resembling the root tip in mature Masson Pine (Pinus massoniana)

inferred← citeshttps://doi.org/10.2139/ssrn.7602598openalex-snapshot

Conventional sampling underestimates plant rhizosphere immunity: insights from an in situ rhizosphere metabolite sampling system

inferred← citeshttps://doi.org/10.21769/bioprotoc.3245openalex-snapshot

An Adjustable Protocol to Analyze Chemical Profiles of Non-sterile Rhizosphere Soil

inferred← citeshttps://doi.org/10.22259/2637-5338.0101002openalex-snapshot

Mitochondrial Complex 1is Important for Plant Tolerance to Fungal Biotic Stress

inferred← citeshttps://doi.org/10.22541/au.171934398.85448535/v1openalex-snapshot

Decoding Nature's Conversations: Metabolomics and the Intriguing World of Plant-Microbe Interactions

inferred← citeshttps://doi.org/10.2533/chimia.2021.700openalex-snapshot

Chemical Innovation for Sustainable Agriculture by Investing in Soil Health

inferred← citeshttps://doi.org/10.26226/morressier.5b5199c4b1b87b000eceea0fopenalex-snapshot

1786 - Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota

inferred← citeshttps://doi.org/10.31219/osf.io/43uebopenalex-snapshot

Metabolomics in Plant-Microbe Interactions: Unveiling Chemical Dialogues and Advancing Agriculture

inferred← citeshttps://doi.org/10.3389/fbioe.2020.00896openalex-snapshot

Beyond Plant Microbiome Composition: Exploiting Microbial Functions and Plant Traits via Integrated Approaches

inferred← citeshttps://doi.org/10.3389/fbioe.2021.812316openalex-snapshot

Microbial Responses to the Reduction of Chemical Fertilizers in the Rhizosphere Soil of Flue-Cured Tobacco

inferred← citeshttps://doi.org/10.3389/fbioe.2022.866419openalex-snapshot

Fungal Inhibition of Agricultural Soil Pathogen Stimulated by Nitrogen-Reducing Fertilization

inferred← citeshttps://doi.org/10.3389/fevo.2026.1770196openalex-snapshot

Assessing the chemical composition and ecological relevance of root exudates in legume species

inferred← citeshttps://doi.org/10.3389/ffgc.2023.1142979openalex-snapshot

Impact of 30 years precipitation regime differences on forest soil physiology and microbial assemblages

inferred← citeshttps://doi.org/10.3389/fmicb.2018.00848openalex-snapshot

Trichoderma Biofertilizer Links to Altered Soil Chemistry, Altered Microbial Communities, and Improved Grassland Biomass

inferred← citeshttps://doi.org/10.3389/fmicb.2018.01847openalex-snapshot

Fungi Indirectly Affect Plant Root Architecture by Modulating Soil Volatile Organic Compounds

inferred← citeshttps://doi.org/10.3389/fmicb.2018.03241openalex-snapshot

Trichoderma-Inoculation and Mowing Synergistically Altered Soil Available Nutrients, Rhizosphere Chemical Compounds and Soil Microbial Community, Potentially Driving Alfalfa Growth

inferred← citeshttps://doi.org/10.3389/fmicb.2019.00078openalex-snapshot

Concentration Dependent Effect of Plant Root Exudates on the Chemosensory Systems of Pseudomonas putida KT2440

inferred← citeshttps://doi.org/10.3389/fmicb.2020.00571openalex-snapshot

Composition, Predicted Functions and Co-occurrence Networks of Rhizobacterial Communities Impacting Flowering Desert Events in the Atacama Desert, Chile

inferred← citeshttps://doi.org/10.3389/fmicb.2022.937940openalex-snapshot

Root exudates contribute to belowground ecosystem hotspots: A review

inferred← citeshttps://doi.org/10.3389/fmicb.2022.971836openalex-snapshot

Untargeted metabolite profiling to elucidate rhizosphere and leaf metabolome changes of wheat cultivars (Triticum aestivum L.) treated with the plant growth-promoting rhizobacteria Paenibacillus alvei (T22) and Bacillus subtilis

inferred← citeshttps://doi.org/10.3389/fmicb.2024.1337672openalex-snapshot

Metabolomics reveals changes in soil metabolic profiles during vegetation succession in karst area

inferred← citeshttps://doi.org/10.3389/fmicb.2025.1674216openalex-snapshot

Insights into microbiome-triterpenoid correlation in Poria cocos via comparative analysis of sclerotial and soil microenvironments

inferred← citeshttps://doi.org/10.3389/fmicb.2026.1816468openalex-snapshot

Microbial elicitors to metabolic reprogramming: an integrative model of plant-microbe interactions

inferred← citeshttps://doi.org/10.3389/fpls.2021.621276openalex-snapshot

Linking Plant Secondary Metabolites and Plant Microbiomes: A Review

inferred← citeshttps://doi.org/10.3389/fpls.2022.1062982openalex-snapshot

Metabolomics of plant root exudates: From sample preparation to data analysis

inferred← citeshttps://doi.org/10.3389/fpls.2022.928367openalex-snapshot

Effects of single- and mixed-bacterial inoculation on the colonization and assembly of endophytic communities in plant roots

inferred← citeshttps://doi.org/10.3389/fpls.2022.997292openalex-snapshot

Root exudates and rhizosphere soil bacterial relationships of Nitraria tangutorum are linked to k-strategists bacterial community under salt stress

inferred← citeshttps://doi.org/10.3389/fpls.2023.1339478openalex-snapshot

Response of bacterial community metabolites to bacterial wilt caused by Ralstonia solanacearum: a multi-omics analysis

inferred← citeshttps://doi.org/10.3389/fpls.2026.1729814openalex-snapshot

Characterization of black oat root exudates in the presence of interspecific weed species and intraspecific neighbors, and their effects on root traits

inferred← citeshttps://doi.org/10.3390/agronomy14123000openalex-snapshot

Impact of Alternative Substrates on Plant Growth and Root Exudates in Plant Interactions: A Study on Secale cereale L. and Amaranthus retroflexus L.

inferred← citeshttps://doi.org/10.3390/biology11030346openalex-snapshot

Rhizosphere Tripartite Interactions and PGPR-Mediated Metabolic Reprogramming towards ISR and Plant Priming: A Metabolomics Review

inferred← citeshttps://doi.org/10.3390/biology11081156openalex-snapshot

Metabolomics and Chemoinformatics in Agricultural Biotechnology Research: Complementary Probes in Unravelling New Metabolites for Crop Improvement

inferred← citeshttps://doi.org/10.3390/horticulturae11080892openalex-snapshot

Meloidogyne incognita Significantly Alters the Cucumber Root Metabolome and Enriches Differential Accumulated Metabolites Regulating Nematode Chemotaxis and Infection

inferred← citeshttps://doi.org/10.3390/ijms20020431openalex-snapshot

Non-Targeted Metabolomics Reveals Sorghum Rhizosphere-Associated Exudates are Influenced by the Belowground Interaction of Substrate and Sorghum Genotype

inferred← citeshttps://doi.org/10.3390/ijms22073319openalex-snapshot

Understanding Plant Social Networking System: Avoiding Deleterious Microbiota but Calling Beneficials

inferred← citeshttps://doi.org/10.3390/ijms22136655openalex-snapshot

Chemotaxis of Beneficial Rhizobacteria to Root Exudates: The First Step towards Root–Microbe Rhizosphere Interactions

inferred← citeshttps://doi.org/10.3390/ijms23094860openalex-snapshot

Emerging Function of Ecotype-Specific Splicing in the Recruitment of Commensal Microbiome

inferred← citeshttps://doi.org/10.3390/ijms24043268openalex-snapshot

Silicon Application for the Modulation of Rhizosphere Soil Bacterial Community Structures and Metabolite Profiles in Peanut under Ralstonia solanacearum Inoculation

inferred← citeshttps://doi.org/10.3390/jof8100989openalex-snapshot

Volatile Organic Compound (VOC) Profiles of Different Trichoderma Species and Their Potential Application

inferred← citeshttps://doi.org/10.3390/metabo10030096openalex-snapshot

Metabolomics to Exploit the Primed Immune System of Tomato Fruit

inferred← citeshttps://doi.org/10.3390/microorganisms10102013openalex-snapshot

The Promises, Challenges, and Opportunities of Omics for Studying the Plant Holobiont

inferred← citeshttps://doi.org/10.3390/microorganisms12030541openalex-snapshot

Production of a Rich Fertilizer Base for Plants from Waste Organic Residues by Microbial Formulation Technology

inferred← citeshttps://doi.org/10.3390/microorganisms5040077openalex-snapshot

Bacterial Endophyte Colonization and Distribution within Plants

inferred← citeshttps://doi.org/10.3390/microorganisms8040575openalex-snapshot

Effects of Halophyte Root Exudates and Their Components on Chemotaxis, Biofilm Formation and Colonization of the Halophilic Bacterium Halomonas Anticariensis FP35T

inferred← citeshttps://doi.org/10.3390/microorganisms9071400openalex-snapshot

Improvement of Soil Microbial Diversity through Sustainable Agricultural Practices and Its Evaluation by -Omics Approaches: A Perspective for the Environment, Food Quality and Human Safety

inferred← citeshttps://doi.org/10.3390/molecules24152737openalex-snapshot

Allelochemicals and Signaling Chemicals in Plants

inferred← citeshttps://doi.org/10.3390/plants14213248openalex-snapshot

A Review of the Regulatory Role of Plant Growth–Promoting Rhizobacteria in Alfalfa Under Stress Conditions

inferred← citeshttps://doi.org/10.3390/w16131920openalex-snapshot

The Status of Research on the Root Exudates of Submerged Plants and Their Effects on Aquatic Organisms

inferred← citeshttps://doi.org/10.33915/etd.11438openalex-snapshot

GETTING TO THE ROOT CAUSE: THE GENETIC UNDERPINNINGS OF ROOT SYSTEM ARCHITECTURE AND RHIZODEPOSITION IN SORGHUM

inferred← citeshttps://doi.org/10.3410/f.737311621.793571181openalex-snapshot

Faculty Opinions recommendation of Rhizosphere microbiome mediates systemic root metabolite exudation by root-to-root signaling.

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