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Bacteria-Phage Antagonistic Coevolution in Soil
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Experimental coevolution with bacteria and phage
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Parasite adaptation to locally common host genotypes
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Is there a cost of virus resistance in marine cyanobacteria?
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Host–parasite ‘Red Queen’ dynamics archived in pond sediment
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Coevolution with viruses drives the evolution of bacterial mutation rates
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Long-term survival during stationary phase: evolution and the GASP phenotype
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Linking genetic change to community evolution: insights from studies of bacteria and bacteriophage
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Population mixing accelerates coevolution
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A Meta‐Analysis of Factors Affecting Local Adaptation between Interacting Species
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Host-parasite coevolution in a multilocus gene-for-gene system
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Antagonistic coevolution between a bacterium and a bacteriophage
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Antagonistic coevolution with parasites increases the cost of host deleterious mutations
inferredcites →https://doi.org/10.1111/j.0014-3820.2002.tb01448.xopenalex-snapshot
LOCAL ADAPTATION IN THE LINUM MARGINALE?MELAMPSORA LINI HOST-PATHOGEN INTERACTION
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Increasing productivity accelerates host–parasite coevolution
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Host–parasite coevolution and patterns of adaptation across time and space
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A synthesis of experimental work on parasite local adaptation
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Viral biogeography revealed by signatures in Sulfolobus islandicus genomes
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LOCAL POPULATION DIFFERENTIATION FOR COMPATIBILITY IN AN ANNUAL LEGUME AND ITS HOST-SPECIFIC FUNGAL PATHOGEN
inferredcites →https://doi.org/10.1126/science.1112665openalex-snapshot
Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
inferredcites →https://doi.org/10.1126/science.1174173openalex-snapshot
Local Adaptation of Bacteriophages to Their Bacterial Hosts in Soil
inferredcites →https://doi.org/10.1126/science.265.5175.1084openalex-snapshot
Virulence and Local Adaptation of a Horizontally Transmitted Parasite
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The geographic mosaic of coevolution
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The Geographic Mosaic of Coevolution
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Community context matters for bacteria-phage ecology and evolution
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Phages in the infant gut: a framework for virome development during early life
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Organochlorine contamination enriches virus-encoded metabolism and pesticide degradation associated auxiliary genes in soil microbiomes
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Bacteria-phage coevolution with a seed bank
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Long-term genomic coevolution of host-parasite interaction in the natural environment
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Flexible genes establish widespread bacteriophage pan-genomes in cryoconite hole ecosystems
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A single transcription factor facilitates an insect host combating Bacillus thuringiensis infection while maintaining fitness
inferred← citeshttps://doi.org/10.1038/s41467-022-35351-wopenalex-snapshot
Multistep diversification in spatiotemporal bacterial-phage coevolution
inferred← citeshttps://doi.org/10.1038/s41467-024-46933-1openalex-snapshot
Niche availability and competitive loss by facilitation control proliferation of bacterial strains intended for soil microbiome interventions
inferred← citeshttps://doi.org/10.1038/s41559-017-0250-3openalex-snapshot
Positive selection inhibits gene mobilization and transfer in soil bacterial communities
inferred← citeshttps://doi.org/10.1038/s41559-020-01364-1openalex-snapshot
Host diversity slows bacteriophage adaptation by selecting generalists over specialists
inferred← citeshttps://doi.org/10.1038/s41559-021-01390-7openalex-snapshot
Ecology directs host–parasite coevolutionary trajectories across Daphnia–microparasite populations
inferred← citeshttps://doi.org/10.1038/s41559-022-01841-9openalex-snapshot
Competition and coevolution drive the evolution and the diversification of CRISPR immunity
inferred← citeshttps://doi.org/10.1038/s41564-017-0050-1openalex-snapshot
Dynamic biofilm architecture confers individual and collective mechanisms of viral protection
inferred← citeshttps://doi.org/10.1038/s41564-018-0312-6openalex-snapshot
Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing
inferred← citeshttps://doi.org/10.1038/s41564-022-01157-1openalex-snapshot
Phage–host coevolution in natural populations
inferred← citeshttps://doi.org/10.1038/s41564-023-01332-yopenalex-snapshot
Bacteria can shed a layer when phages turn up the heat
inferred← citeshttps://doi.org/10.1038/s41564-024-01686-xopenalex-snapshot
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts
inferred← citeshttps://doi.org/10.1038/s41564-025-02202-5openalex-snapshot
Phage resistance mutations in a marine bacterium impact biogeochemically relevant cellular processes
inferred← citeshttps://doi.org/10.1038/s41579-021-00602-yopenalex-snapshot
Interactions between bacterial and phage communities in natural environments
inferred← citeshttps://doi.org/10.1038/s41586-019-1894-8openalex-snapshot
The arms race between bacteria and their phage foes
inferred← citeshttps://doi.org/10.1038/s41587-019-0100-8openalex-snapshot
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
inferred← citeshttps://doi.org/10.1038/s41587-019-0328-3openalex-snapshot
Phage combination therapies for bacterial wilt disease in tomato
inferred← citeshttps://doi.org/10.1038/s43705-023-00299-5openalex-snapshot
Slow growing bacteria survive bacteriophage in isolation
inferred← citeshttps://doi.org/10.1038/s44259-025-00096-1openalex-snapshot
Antibiotics re-booted—time to kick back against drug resistance
inferred← citeshttps://doi.org/10.1038/s44318-025-00406-3openalex-snapshot
Surface-mediated bacteriophage defense incurs fitness tradeoffs for interbacterial antagonism
inferred← citeshttps://doi.org/10.1038/srep04738openalex-snapshot
Chromosomal DNA deletion confers phage resistance to Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1038/srep07118openalex-snapshot
A marine inducible prophage vB_CibM-P1 isolated from the aerobic anoxygenic phototrophic bacterium Citromicrobium bathyomarinum JL354
inferred← citeshttps://doi.org/10.1038/srep37144openalex-snapshot
No effect of natural transformation on the evolution of resistance to bacteriophages in the Acinetobacter baylyi model system
inferred← citeshttps://doi.org/10.1042/bst20180178openalex-snapshot
Phage-based biocontrol strategies and their application in agriculture and aquaculture
inferred← citeshttps://doi.org/10.1042/etls20170002openalex-snapshot
Phage therapy: awakening a sleeping giant
inferred← citeshttps://doi.org/10.1042/etls20170039openalex-snapshot
The human gut virome: form and function
inferred← citeshttps://doi.org/10.1073/pnas.1101595108openalex-snapshot
Statistical structure of host–phage interactions
inferred← citeshttps://doi.org/10.1073/pnas.1113824108openalex-snapshot
Local adaptation of an introduced transgenic insect fungal pathogen due to new beneficial mutations
inferred← citeshttps://doi.org/10.1073/pnas.1120310109openalex-snapshot
Rapid diversification of coevolving marine Synechococcus and a virus
inferred← citeshttps://doi.org/10.1073/pnas.1201343109openalex-snapshot
Coevolution between invasive and native plants driven by chemical competition and soil biota
inferred← citeshttps://doi.org/10.1073/pnas.1406763111openalex-snapshot
Contrasted coevolutionary dynamics between a bacterial pathogen and its bacteriophages
inferred← citeshttps://doi.org/10.1073/pnas.1520615113openalex-snapshot
Facultative cheating supports the coexistence of diverse quorum-sensing alleles
inferred← citeshttps://doi.org/10.1073/pnas.1600974113openalex-snapshot
Source–sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities
inferred← citeshttps://doi.org/10.1073/pnas.2105124118openalex-snapshot
Methane-derived carbon flows into host–virus networks at different trophic levels in soil
inferred← citeshttps://doi.org/10.1073/pnas.2319790121openalex-snapshot
Episymbiotic Saccharibacteria TM7x modulates the susceptibility of its host bacteria to phage infection and promotes their coexistence
inferred← citeshttps://doi.org/10.1073/pnas.2414229121openalex-snapshot
Bacterial defense and phage counterdefense lead to coexistence in a modeled ecosystem
inferred← citeshttps://doi.org/10.1073/pnas.2417628122openalex-snapshot
A minimal model of panimmunity maintenance by horizontal gene transfer in the ecological dynamics of bacteria and phages
inferred← citeshttps://doi.org/10.1079/9781845939847.0000openalex-snapshot
Bacteriophages in health and disease
inferred← citeshttps://doi.org/10.1080/21597081.2015.1050153openalex-snapshot
Experimental evolution and bacterial resistance: (co)evolutionary costs and trade-offs as opportunities in phage therapy research
inferred← citeshttps://doi.org/10.1086/662677openalex-snapshot
The Population and Evolutionary Dynamics ofVibrio choleraeand Its Bacteriophage: Conditions for Maintaining Phage-Limited Communities
inferred← citeshttps://doi.org/10.1086/674826openalex-snapshot
Spatial Structure Mitigates Fitness Costs in Host-Parasite Coevolution
inferred← citeshttps://doi.org/10.1086/676930openalex-snapshot
Experimental Coevolution: Rapid Local Adaptation by Parasites Depends on Host Mating System
inferred← citeshttps://doi.org/10.1086/682588openalex-snapshot
How Do Microbial Populations and Communities Function as Model Systems?
inferred← citeshttps://doi.org/10.1086/692110openalex-snapshot
Network Structure and Selection Asymmetry Drive Coevolution in Species-Rich Antagonistic Interactions
inferred← citeshttps://doi.org/10.1086/704157openalex-snapshot
Coevolution Creates Complex Mosaics across Large Landscapes
inferred← citeshttps://doi.org/10.1086/717181openalex-snapshot
Multiyear Time-Shift Study of Bacteria and Phage Dynamics in the Phyllosphere
inferred← citeshttps://doi.org/10.1089/phage.2023.0047openalex-snapshot
Thinking Phage Innovations Through Evolution and Ecology
inferred← citeshttps://doi.org/10.1093/cid/ciad481openalex-snapshot
Magistral Phage Preparations: Is This the Model for Everyone?
inferred← citeshttps://doi.org/10.1093/evolut/qpad099openalex-snapshot
Source-sink migration of natural enemies drives maladaptation of victim populations in sink habitats
inferred← citeshttps://doi.org/10.1093/evolut/qpaf194openalex-snapshot
Don't ask “when is it coevolution?”—ask “how?”
inferred← citeshttps://doi.org/10.1093/evolut/qpaf224openalex-snapshot
Coevolutionary cycling in allele frequencies and the evolution of virulence
inferred← citeshttps://doi.org/10.1093/evolut/qpag029openalex-snapshot
Experimental evolution in communities: beyond pairwise interactions
inferred← citeshttps://doi.org/10.1093/femsec/fiaa096openalex-snapshot
Silent rain: does the atmosphere-mediated connectivity between microbiomes influence bacterial evolutionary rates?
inferred← citeshttps://doi.org/10.1093/femsec/fiaa100openalex-snapshot
A generalised model for generalised transduction: the importance of co-evolution and stochasticity in phage mediated antimicrobial resistance transfer
inferred← citeshttps://doi.org/10.1093/femsec/fiaa162openalex-snapshot
Mucoidy, a general mechanism for maintaining lytic phage in populations of bacteria
inferred← citeshttps://doi.org/10.1093/femsec/fiab026openalex-snapshot
The proficiency of the original host species determines community-level plasmid dynamics
inferred← citeshttps://doi.org/10.1093/femsec/fiae052openalex-snapshot
The role of rhizosphere phages in soil health
inferred← citeshttps://doi.org/10.1093/femsec/fiaf027openalex-snapshot
Microbial community structure is affected by phage-resistance associated increases in host density
inferred← citeshttps://doi.org/10.1093/femsle/fnaa009openalex-snapshot
Characteristics of two myoviruses induced from the coastal photoheterotrophic bacterium Porphyrobacter sp. YT40
inferred← citeshttps://doi.org/10.1093/femsle/fnz047openalex-snapshot
Addiction systems antagonize bacterial adaptive immunity
inferred← citeshttps://doi.org/10.1093/femsre/fuaa020openalex-snapshot
Bacteriophage-mediated manipulation of the gut microbiome – promises and presents limitations
inferred← citeshttps://doi.org/10.1093/femsre/fuy006openalex-snapshot
Soil protists: a fertile frontier in soil biology research
inferred← citeshttps://doi.org/10.1093/gbe/evx064openalex-snapshot
Core Genes Evolve Rapidly in the Long-Term Evolution Experiment with Escherichia coli
inferred← citeshttps://doi.org/10.1093/ismeco/ycae101openalex-snapshot
Phage resistance mutations affecting the bacterial cell surface increase susceptibility to fungi in a model cheese community
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