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Deriving chemosensitivity from cell lines: Forensic bioinformatics and reproducible research in high-throughput biology
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4 of the 28 references listed on this page are in the Retraction Watch database as retracted (export 2026-10-28): 10.1016/s1470-2045(07)70345-5 (notice 2011-02-01), 10.1038/nm1491 (notice 2011-01-07), 10.1200/jco.2007.11.0593 (notice 2010-12-10), 10.1371/journal.pone.0001908 (notice 2011-09-02).
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Gene expression profiling of 30 cancer cell lines predicts resistance towards 11 anticancer drugs at clinically achieved concentrations
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The Case for Including Data and Code with ML Publications in Laboratory Medicine
inferred← citeshttps://doi.org/10.1093/jalm/jfac107openalex-snapshot
Should We Teach Data Science to Laboratorians-in-Training?
inferred← citeshttps://doi.org/10.1093/jamiaopen/ooaa043openalex-snapshot
Facilitating reproducible research through direct connection of data analysis with manuscript preparation: StatTag for connecting statistical software to Microsoft Word
inferred← citeshttps://doi.org/10.1093/jnci/djt202openalex-snapshot
Independent Validation of a Model Using Cell Line Chemosensitivity to Predict Response to Therapy
inferred← citeshttps://doi.org/10.1093/jnci/dju048openalex-snapshot
Risk Prediction for Late-Stage Ovarian Cancer by Meta-analysis of 1525 Patient Samples
inferred← citeshttps://doi.org/10.1093/jnci/dju049openalex-snapshot
Comparative Meta-analysis of Prognostic Gene Signatures for Late-Stage Ovarian Cancer
inferred← citeshttps://doi.org/10.1093/nar/gkr533openalex-snapshot
A global insight into a cancer transcriptional space using pancreatic data: importance, findings and flaws
inferred← citeshttps://doi.org/10.1097/tp.0000000000001622openalex-snapshot
Biomarker Guidelines for High-Dimensional Genomic Studies in Transplantation: Adding Method to the Madness
inferred← citeshttps://doi.org/10.1098/rsif.2011.0616openalex-snapshot
A formal mathematical framework for physiological observations, experiments and analyses
inferred← citeshttps://doi.org/10.1098/rsif.2013.1030openalex-snapshot
Relevance relations for the concept of reproducibility
inferred← citeshttps://doi.org/10.1098/rsos.240313openalex-snapshot
Measuring transparency in the social sciences: political science and international relations
inferred← citeshttps://doi.org/10.1101/018168openalex-snapshot
Measuring the Contribution of Genomic Predictors to Improving Estimator Precision in Randomized trials
inferred← citeshttps://doi.org/10.1101/066803openalex-snapshot
A statistical definition for reproducibility and replicability
inferred← citeshttps://doi.org/10.1101/079350openalex-snapshot
Reproducibility and replicability of rodent phenotyping in preclinical studies
inferred← citeshttps://doi.org/10.1101/500660openalex-snapshot
Analysis of >30,000 abstracts suggests higher false discovery rates for oncology journals, especially those with low impact factors
inferred← citeshttps://doi.org/10.1108/07419051111184034openalex-snapshot
The AAAS 2011 Annual: Science Without Borders
inferred← citeshttps://doi.org/10.1109/access.2022.3158675openalex-snapshot
Reproducibility in Computing Research: An Empirical Study
inferred← citeshttps://doi.org/10.1109/bibm.2017.8217887openalex-snapshot
Digital reproducibility requirements of computational genomic workflows
inferred← citeshttps://doi.org/10.1109/ethics.2016.7560050openalex-snapshot
A principled approach to reproducible research: a comparative review towards scientific integrity in computational research
inferred← citeshttps://doi.org/10.1109/sai.2017.8252133openalex-snapshot
Cancer survivability with logistic regression
inferred← citeshttps://doi.org/10.1109/wsc.2016.7822185openalex-snapshot
Panel — Reproducible research in discrete event simulation — A must or rather a maybe?
inferred← citeshttps://doi.org/10.1111/gwat.12269openalex-snapshot
Python Scripting: The Return to Programming
inferred← citeshttps://doi.org/10.1111/j.1740-9713.2011.00505.xopenalex-snapshot
The Duke University scandal - what can be done?
inferred← citeshttps://doi.org/10.1111/j.1740-9713.2015.00827.xopenalex-snapshot
The Reproducibility Crisis in Science: A Statistical Counterattack
inferred← citeshttps://doi.org/10.1111/rssa.12132openalex-snapshot
Statistics: a Data Science for the 21st Century
inferred← citeshttps://doi.org/10.1126/sciadv.abn3999openalex-snapshot
Toward a taxonomy of trust for probabilistic machine learning
inferred← citeshttps://doi.org/10.1126/science.1211811openalex-snapshot
Improving Validation Practices in “Omics” Research
inferred← citeshttps://doi.org/10.1136/amiajnl-2012-000972openalex-snapshot
Scientific research in the age of omics: the good, the bad, and the sloppy
inferred← citeshttps://doi.org/10.1142/9789814489072_0025openalex-snapshot
Research Methods for Clinical Trials in Personalized Medicine: A Systematic Review
inferred← citeshttps://doi.org/10.1145/2038642.2038650openalex-snapshot
Repeatability, reproducibility, and rigor in systems research
inferred← citeshttps://doi.org/10.1145/2064227.2064247openalex-snapshot
Principles for robust evaluation infrastructure
inferred← citeshttps://doi.org/10.1145/2110497.2110504openalex-snapshot
A new approach for publishing workflows
inferred← citeshttps://doi.org/10.1145/3025171.3025193openalex-snapshot
Towards Automating Data Narratives
inferred← citeshttps://doi.org/10.1145/3311955openalex-snapshot
A Survey on Collecting, Managing, and Analyzing Provenance from Scripts
inferred← citeshttps://doi.org/10.1146/annurev-publhealth-012420-105110openalex-snapshot
Reproducible Research: A Retrospective
inferred← citeshttps://doi.org/10.1146/annurev-statistics-010814-020127openalex-snapshot
Reproducing Statistical Results
inferred← citeshttps://doi.org/10.1146/annurev-statistics-040220-013917openalex-snapshot
Perspective on Data Science
inferred← citeshttps://doi.org/10.1146/annurev-statistics-060116-054104openalex-snapshot
Is Most Published Research Really False?
inferred← citeshttps://doi.org/10.1158/0008-5472.c.6503906.v1openalex-snapshot
Data from Impact of Intertumoral Heterogeneity on Predicting Chemotherapy Response of BRCA1-Deficient Mammary Tumors
inferred← citeshttps://doi.org/10.1158/0008-5472.can-11-4201openalex-snapshot
Impact of Intertumoral Heterogeneity on Predicting Chemotherapy Response of BRCA1-Deficient Mammary Tumors
inferred← citeshttps://doi.org/10.1158/1055-9965.epi-12-1144openalex-snapshot
Knowledge Integration in Cancer: Current Landscape and Future Prospects
inferred← citeshttps://doi.org/10.1158/1078-0432.ccr-14-1749openalex-snapshot
Integrating RAS Status into Prognostic Signatures for Adenocarcinomas of the Lung
inferred← citeshttps://doi.org/10.1158/2159-8274.cd-11-0036openalex-snapshot
The BATTLE Trial: A Bold Step toward Improving the Efficiency of Biomarker-Based Drug Development
inferred← citeshttps://doi.org/10.1161/circresaha.114.303819openalex-snapshot
Reproducibility in Science
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