On the public citation graph
Deletion of Ultraconserved Elements Yields Viable Mice
0 signed · 324 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/humu.10310openalex-snapshot
Mutations of ARX are associated with striking pleiotropy and consistent genotype–phenotype correlation
inferredcites →https://doi.org/10.1007/bf00873996openalex-snapshot
Prognosis of patients with unilateral renal agenesis
inferredcites →https://doi.org/10.1007/s00335-001-2121-zopenalex-snapshot
exma: an X-linked insertional mutation that disrupts forebrain and eye development
inferredcites →https://doi.org/10.1016/j.cell.2006.02.041openalex-snapshot
A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/j.cell.2006.02.043openalex-snapshot
Control of Developmental Regulators by Polycomb in Human Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/s0022-5347(01)68074-1openalex-snapshot
ASSOCIATED UROLOGICAL ANOMALIES IN CHILDREN WITH UNILATERAL RENAL AGENESIS
inferredcites →https://doi.org/10.1038/nature05295openalex-snapshot
In vivo enhancer analysis of human conserved non-coding sequences
inferredcites →https://doi.org/10.1038/ng1009openalex-snapshot
Mutation of ARX causes abnormal development of forebrain and testes in mice and X-linked lissencephaly with abnormal genitalia in humans
inferredcites →https://doi.org/10.1038/ng1309openalex-snapshot
SOX3 is required during the formation of the hypothalamo-pituitary axis
inferredcites →https://doi.org/10.1038/ng1710openalex-snapshot
Conserved noncoding sequences are selectively constrained and not mutation cold spots
inferredcites →https://doi.org/10.1038/ng1888openalex-snapshot
Mammalian ultraconserved elements are strongly depleted among segmental duplications and copy number variants
inferredcites →https://doi.org/10.1038/nrg1350openalex-snapshot
Comparative genomics at the vertebrate extremes
inferredcites →https://doi.org/10.1038/nrg1527openalex-snapshot
Conserved non-genic sequences — an unexpected feature of mammalian genomes
inferredcites →https://doi.org/10.1086/344661openalex-snapshot
Transcription Factor SOX3 Is Involved in X-Linked Mental Retardation with Growth Hormone Deficiency
inferredcites →https://doi.org/10.1086/430134openalex-snapshot
Over- and Underdosage of SOX3 Is Associated with Infundibular Hypoplasia and Hypopituitarism
inferredcites →https://doi.org/10.1097/00008480-200312000-00004openalex-snapshot
The ARX story (epilepsy, mental retardation, autism, and cerebral malformations): one gene leads to many phenotypes
inferredcites →https://doi.org/10.1101/gad.834100openalex-snapshot
Dmrt1 , a gene related to worm and fly sexual regulators, is required for mammalian testis differentiation
inferredcites →https://doi.org/10.1101/gr.1961204openalex-snapshot
Noncoding Sequences Conserved in a Limited Number of Mammals in the SIM2 Interval are Frequently Functional
inferredcites →https://doi.org/10.1126/science.1098119openalex-snapshot
Ultraconserved Elements in the Human Genome
inferredcites →https://doi.org/10.1128/mcb.23.22.8084-8091.2003openalex-snapshot
Sox3 Is Required for Gonadal Function, but Not Sex Determination, in Males and Females
inferredcites →https://doi.org/10.1172/jci24156openalex-snapshot
An interstitial deletion-insertion involving chromosomes 2p25.3 and Xq27.1, near SOX3, causes X-linked recessive hypoparathyroidism
inferredcites →https://doi.org/10.1210/jc.85.9.3094openalex-snapshot
Sex-Determining Gene(s) on Distal 9p: Clinical and Molecular Studies in Six Cases
inferredcites →https://doi.org/10.1385/1-59745-007-3:103openalex-snapshot
In Situ Hybridization of Whole-Mount Embryos
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.2139/ssrn.4777221openalex-extracted
Japanese Medaka Dmrt3a is Involved in Male Fertility
inferred← citeshttps://doi.org/10.1002/9780470015902.a0001798.pub2openalex-snapshot
DNA Sequence Analysis
inferred← citeshttps://doi.org/10.1002/9780470015902.a0020828openalex-snapshot
The Biological Significance of Conserved Nongenic DNA
inferred← citeshttps://doi.org/10.1002/9780470015902.a0020842openalex-snapshot
Ultraconserved DNA Sequence Elements in the Human Genome
inferred← citeshttps://doi.org/10.1002/9780470015902.a0020842.pub2openalex-snapshot
Ultraconserved Elements ( UCEs ) in the Human Genome
inferred← citeshttps://doi.org/10.1002/9781119860914.ch21openalex-snapshot
Mammalian Cortical Regional Specification
inferred← citeshttps://doi.org/10.1002/ajmg.b.32004openalex-snapshot
Evaluation of conserved and ultra‐conserved non‐genic sequences in chromosome 15q15‐linked periodic catatonia
inferred← citeshttps://doi.org/10.1002/bies.200800182openalex-snapshot
The genome‐centric concept: resynthesis of evolutionary theory
inferred← citeshttps://doi.org/10.1002/dneu.20888openalex-snapshot
Zebrafish as a genomics model for human neurological and polygenic disorders
inferred← citeshttps://doi.org/10.1002/humu.21288openalex-snapshot
ARX spectrum disorders: making inroads into the molecular pathology
inferred← citeshttps://doi.org/10.1002/wrna.1329openalex-snapshot
Functionalities of expressed messenger RNAs revealed from mutant phenotypes
inferred← citeshttps://doi.org/10.1002/wrna.1567openalex-snapshot
Highlighting transcribed ultraconserved regions in human diseases
inferred← citeshttps://doi.org/10.1007/978-3-211-75123-7_6openalex-snapshot
From gene expression profiling to gene regulation
inferred← citeshttps://doi.org/10.1007/978-3-642-12340-5_12openalex-snapshot
Do Long and Highly Conserved Noncoding Sequences in Vertebrates Have Biological Functions?
inferred← citeshttps://doi.org/10.1007/978-3-662-69423-7_4openalex-snapshot
Perplexing Cats and Demons: Pointers to the Quantum-Physical Foundations of Life
inferred← citeshttps://doi.org/10.1007/978-4-431-56603-8_2openalex-snapshot
Rubbish DNA: The Functionless Fraction of the Human Genome
inferred← citeshttps://doi.org/10.1007/978-4-431-92691-7_21openalex-snapshot
Genome Duplication and Subfunction Partitioning: Sox9 in Medaka and Other Vertebrates
inferred← citeshttps://doi.org/10.1007/978-90-481-2675-0_5openalex-snapshot
Involvement of MicroRNAs in Human Cancer: Discovery and Expression Profiling
inferred← citeshttps://doi.org/10.1007/978-981-13-0529-0_15openalex-snapshot
Humanized Flies and Resources for Cross-Species Study
inferred← citeshttps://doi.org/10.1007/s00005-015-0379-1openalex-snapshot
Search for the Function of NWC, Third Gene Within RAG Locus: Generation and Characterization of NWC-Deficient Mice
inferred← citeshttps://doi.org/10.1007/s00018-013-1288-2openalex-snapshot
Expanding roles for the evolutionarily conserved Dmrt sex transcriptional regulators during embryogenesis
inferred← citeshttps://doi.org/10.1007/s00018-018-3000-zopenalex-snapshot
Long non-coding RNA in stem cell pluripotency and lineage commitment: functions and evolutionary conservation
inferred← citeshttps://doi.org/10.1007/s00239-013-9594-8openalex-snapshot
Two Rapidly Evolving Genes Contribute to Male Fitness in Drosophila
inferred← citeshttps://doi.org/10.1007/s00335-008-9136-7openalex-snapshot
Noncoding RNA in development
inferred← citeshttps://doi.org/10.1007/s00335-008-9152-7openalex-snapshot
Identification and characterization of new long conserved noncoding sequences in vertebrates
inferred← citeshttps://doi.org/10.1007/s00335-015-9580-0openalex-snapshot
Application of comparative biology in GO functional annotation: the mouse model
inferred← citeshttps://doi.org/10.1007/s00439-014-1424-6openalex-snapshot
Disruption of long-range gene regulation in human genetic disease: a kaleidoscope of general principles, diverse mechanisms and unique phenotypic consequences
inferred← citeshttps://doi.org/10.1007/s10539-022-09853-2openalex-snapshot
Causal-role myopia and the functional investigation of junk DNA
inferred← citeshttps://doi.org/10.1007/s10914-021-09595-0openalex-snapshot
Using Ultraconserved Elements to Unravel Lagomorph Phylogenetic Relationships
inferred← citeshttps://doi.org/10.1007/s11427-018-9447-8openalex-snapshot
Exaptation at the molecular genetic level
inferred← citeshttps://doi.org/10.1007/s11692-024-09644-5openalex-snapshot
Mutational Selection: Fragile Sites, Replicative Stress, and Genome Evolution
inferred← citeshttps://doi.org/10.1007/s12304-008-9032-2openalex-snapshot
Role of Utility and Inference in the Evolution of Functional Information
inferred← citeshttps://doi.org/10.1016/b978-0-12-409527-4.00034-1openalex-snapshot
Animal Models in Biomedical Research
inferred← citeshttps://doi.org/10.1016/b978-0-12-814405-3.00027-8openalex-snapshot
Gene regulatory networks controlling neuronal development
inferred← citeshttps://doi.org/10.1016/bs.adgen.2016.04.003openalex-snapshot
The Zebrafish as Model for Deciphering the Regulatory Architecture of Vertebrate Genomes
inferred← citeshttps://doi.org/10.1016/j.ajhg.2013.10.028openalex-snapshot
Disruption of Autoregulatory Feedback by a Mutation in a Remote, Ultraconserved PAX6 Enhancer Causes Aniridia
inferred← citeshttps://doi.org/10.1016/j.ajhg.2014.05.001openalex-snapshot
An Enhancer Polymorphism at the Cardiomyocyte Intercalated Disc Protein NOS1AP Locus Is a Major Regulator of the QT Interval
inferred← citeshttps://doi.org/10.1016/j.ajhg.2020.01.012openalex-snapshot
Enhancer Domains Predict Gene Pathogenicity and Inform Gene Discovery in Complex Disease
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.741521openalex-snapshot
The potential modulation mechanisms of Dmrt-1 and Dmrt-3 affecting testicular development of Scylla paramamosain
inferred← citeshttps://doi.org/10.1016/j.bbrep.2017.01.001openalex-snapshot
CRISPR/Cas9-mediated simultaneous knockout of Dmrt1 and Dmrt3 does not recapitulate the 46,XY gonadal dysgenesis observed in 9p24.3 deletion patients
inferred← citeshttps://doi.org/10.1016/j.cell.2017.12.017openalex-snapshot
Ultraconserved Enhancers Are Required for Normal Development
inferred← citeshttps://doi.org/10.1016/j.celrep.2013.09.022openalex-snapshot
A DNA-Centric Protein Interaction Map of Ultraconserved Elements Reveals Contribution of Transcription Factor Binding Hubs to Conservation
inferred← citeshttps://doi.org/10.1016/j.celrep.2015.06.043openalex-snapshot
OTX2 Transcription Factor Controls Regional Patterning within the Medial Ganglionic Eminence and Regional Identity of the Septum
inferred← citeshttps://doi.org/10.1016/j.celrep.2018.06.031openalex-snapshot
Ultraconserved Elements Occupy Specific Arenas of Three-Dimensional Mammalian Genome Organization
inferred← citeshttps://doi.org/10.1016/j.clp.2015.02.009openalex-snapshot
Genetics and Genetic Testing in Congenital Heart Disease
inferred← citeshttps://doi.org/10.1016/j.cub.2013.11.026openalex-snapshot
Development: Facial Makeup Enhancing Our Looks
inferred← citeshttps://doi.org/10.1016/j.devcel.2025.06.006openalex-snapshot
A dual enhancer-attenuator element ensures transient Cdx2 expression during mouse posterior body formation
inferred← citeshttps://doi.org/10.1016/j.ejmg.2011.11.001openalex-snapshot
Homozygous deletion of a gene-free region of 4p15 in a child with multiple anomalies: Could biallelic loss of conserved, non-coding elements lead to a phenotype?
inferred← citeshttps://doi.org/10.1016/j.exphem.2012.02.006openalex-snapshot
Deletion of the Scl +19 enhancer increases the blood stem cell compartment without affecting the formation of mature blood lineages
inferred← citeshttps://doi.org/10.1016/j.gde.2009.10.003openalex-snapshot
Evolution of transcriptional control in mammals
inferred← citeshttps://doi.org/10.1016/j.gde.2014.03.014openalex-snapshot
The architecture of gene expression: integrating dispersed cis-regulatory modules into coherent regulatory domains
inferred← citeshttps://doi.org/10.1016/j.gene.2016.06.006openalex-snapshot
LncRNA-uc.167 influences cell proliferation, apoptosis and differentiation of P19 cells by regulating Mef2c
inferred← citeshttps://doi.org/10.1016/j.immuni.2015.05.004openalex-snapshot
Long Noncoding RNA in Hematopoiesis and Immunity
inferred← citeshttps://doi.org/10.1016/j.jgg.2024.12.014openalex-snapshot
The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila
inferred← citeshttps://doi.org/10.1016/j.mrrev.2015.04.001openalex-snapshot
Protection of the genome and central protein-coding sequences by non-coding DNA against DNA damage from radiation
inferred← citeshttps://doi.org/10.1016/j.mrrev.2016.01.001openalex-snapshot
Genome defense against exogenous nucleic acids in eukaryotes by non-coding DNA occurs through CRISPR-like mechanisms in the cytosol and the bodyguard protection in the nucleus
inferred← citeshttps://doi.org/10.1016/j.neuint.2014.06.006openalex-snapshot
Expression of transcribed ultraconserved regions of genome in rat cerebral cortex
inferred← citeshttps://doi.org/10.1016/j.neuron.2014.04.014openalex-snapshot
Transcriptional Regulation of Enhancers Active in Protodomains of the Developing Cerebral Cortex
inferred← citeshttps://doi.org/10.1016/j.neuron.2014.11.011openalex-snapshot
Genomic Perspectives of Transcriptional Regulation in Forebrain Development
inferred← citeshttps://doi.org/10.1016/j.semcdb.2012.01.006openalex-snapshot
Understanding genetic variation and function- the applications of next generation sequencing
inferred← citeshttps://doi.org/10.1016/j.semcdb.2016.06.017openalex-snapshot
Gene regulation at a distance: From remote enhancers to 3D regulatory ensembles
inferred← citeshttps://doi.org/10.1016/j.stemcr.2018.01.014openalex-snapshot
An Ultraconserved Element Containing lncRNA Preserves Transcriptional Dynamics and Maintains ESC Self-Renewal
inferred← citeshttps://doi.org/10.1016/j.tcb.2012.04.003openalex-snapshot
Landscapes and archipelagos: spatial organization of gene regulation in vertebrates
inferred← citeshttps://doi.org/10.1016/j.tibs.2008.06.001openalex-snapshot
Alternative splicing resulting in nonsense-mediated mRNA decay: what is the meaning of nonsense?
inferred← citeshttps://doi.org/10.1016/j.tig.2008.04.005openalex-snapshot
Tuning in to the signals: noncoding sequence conservation in vertebrate genomes
inferred← citeshttps://doi.org/10.1016/j.tig.2025.10.012openalex-snapshot
In silico genome transplants and the cis-regulatory basis of biodiversity
inferred← citeshttps://doi.org/10.1016/j.ydbio.2008.10.044openalex-snapshot
Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes
inferred← citeshttps://doi.org/10.1016/j.ydbio.2009.09.029openalex-snapshot
Cis-regulation and chromosomal rearrangement of the fgf8 locus after the teleost/tetrapod split
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.01.035openalex-snapshot
Cis-regulatory characterization of sequence conservation surrounding the Hox4 genes
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.02.012openalex-snapshot
Neurogenin 1 (Neurog1) expression in the ventral neural tube is mediated by a distinct enhancer and preferentially marks ventral interneuron lineages
inferred← citeshttps://doi.org/10.1016/j.ydbio.2010.11.026openalex-snapshot
When needles look like hay: How to find tissue-specific enhancers in model organism genomes
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.02.025openalex-snapshot
Lens development depends on a pair of highly conserved Sox21 regulatory elements
inferred← citeshttps://doi.org/10.1016/j.ydbio.2019.11.015openalex-snapshot
Interrogating the Grainyhead-like 2 (Grhl2) genomic locus identifies an enhancer element that regulates palatogenesis in mouse
inferred← citeshttps://doi.org/10.1016/j.ygeno.2009.07.005openalex-snapshot
Short ultraconserved promoter regions delineate a class of preferentially expressed alternatively spliced transcripts
inferred← citeshttps://doi.org/10.1016/j.ygeno.2010.09.001openalex-snapshot
Conserved proximal promoter elements control repulsive guidance molecule c/hemojuvelin (Hfe2) gene transcription in skeletal muscle
inferred← citeshttps://doi.org/10.1016/j.ygeno.2015.06.007openalex-snapshot
Using transgenic reporter assays to functionally characterize enhancers in animals
inferred← citeshttps://doi.org/10.1016/j.ygeno.2015.06.008openalex-snapshot
Learning about mammalian gene regulation from functional enhancer assays in the mouse
inferred← citeshttps://doi.org/10.1016/j.ymeth.2013.03.021openalex-snapshot
Non-coding transcription at cis-regulatory elements: Computational and experimental approaches
inferred← citeshttps://doi.org/10.1016/j.ymeth.2014.10.008openalex-snapshot
Computational schemes for the prediction and annotation of enhancers from epigenomic assays
inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107197openalex-snapshot
Evolution of host use in fungivorous ciid beetles (Coleoptera: Ciidae): Molecular phylogeny focusing on Japanese taxa
inferred← citeshttps://doi.org/10.1016/s1937-6448(09)78003-7openalex-snapshot
Chapter 3 Genotype–Phenotype Mapping
inferred← citeshttps://doi.org/10.1017/s1473550417000210openalex-snapshot
SETIin vivo: testing the we-are-them hypothesis
inferred← citeshttps://doi.org/10.1038/449010bopenalex-snapshot
Crashing DNA's ultraconservative party
inferred← citeshttps://doi.org/10.1038/d41586-018-00920-xopenalex-snapshot
‘Dark matter’ DNA influences brain development
inferred← citeshttps://doi.org/10.1038/emboj.2011.344openalex-snapshot
The complex transcription regulatory landscape of our genome: control in three dimensions
inferred← citeshttps://doi.org/10.1038/jhg.2013.130openalex-snapshot
Confounding by linkage disequilibrium
inferred← citeshttps://doi.org/10.1038/nature08451openalex-snapshot
Genomic views of distant-acting enhancers
inferred← citeshttps://doi.org/10.1038/nature11399openalex-snapshot
Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice
inferred← citeshttps://doi.org/10.1038/nature12753openalex-snapshot
Topology of mammalian developmental enhancers and their regulatory landscapes
inferred← citeshttps://doi.org/10.1038/ng.2007.55openalex-snapshot
Ultraconservation identifies a small subset of extremely constrained developmental enhancers
inferred← citeshttps://doi.org/10.1038/ng.499openalex-snapshot
Exome sequencing identifies the cause of a mendelian disorder
inferred← citeshttps://doi.org/10.1038/nrg.2016.139openalex-snapshot
Regulatory activities of transposable elements: from conflicts to benefits
inferred← citeshttps://doi.org/10.1038/nrg2814openalex-snapshot
Annotating non-coding regions of the genome
inferred← citeshttps://doi.org/10.1038/s41467-018-07451-zopenalex-snapshot
Heart enhancers with deeply conserved regulatory activity are established early in zebrafish development
inferred← citeshttps://doi.org/10.1038/s41467-020-20714-yopenalex-snapshot
Dissection of the Fgf8 regulatory landscape by in vivo CRISPR-editing reveals extensive intra- and inter-enhancer redundancy
inferred← citeshttps://doi.org/10.1038/s41467-021-22653-8openalex-snapshot
Learning a genome-wide score of human–mouse conservation at the functional genomics level
inferred← citeshttps://doi.org/10.1038/s41467-022-31872-6openalex-snapshot
Extreme purifying selection against point mutations in the human genome
inferred← citeshttps://doi.org/10.1038/s41467-023-44506-2openalex-snapshot
A distant global control region is essential for normal expression of anterior HOXA genes during mouse and human craniofacial development
inferred← citeshttps://doi.org/10.1038/s41467-024-45381-1openalex-snapshot
Multi-omics analysis in human retina uncovers ultraconserved cis-regulatory elements at rare eye disease loci
inferred← citeshttps://doi.org/10.1038/s41467-025-62205-yopenalex-snapshot
Single-cell transcriptomics of ventral forebrain progenitors identifies Evf2 enhancer lncRNA-enhancer gene guidance through direct RNA binding and RNP recruitment domains
inferred← citeshttps://doi.org/10.1038/s41551-024-01204-8openalex-snapshot
Genome-wide Cas9-mediated screening of essential non-coding regulatory elements via libraries of paired single-guide RNAs
inferred← citeshttps://doi.org/10.1038/s41576-020-00311-xopenalex-snapshot
Enhancer redundancy in development and disease
inferred← citeshttps://doi.org/10.1038/s41576-021-00424-xopenalex-snapshot
Perfect and imperfect views of ultraconserved sequences
inferred← citeshttps://doi.org/10.1038/s41588-019-0555-zopenalex-snapshot
RNA isoform screens uncover the essentiality and tumor-suppressor activity of ultraconserved poison exons
inferred← citeshttps://doi.org/10.1038/s41588-021-00812-3openalex-snapshot
Ultraconserved enhancer function does not require perfect sequence conservation
inferred← citeshttps://doi.org/10.1038/s41588-021-00830-1openalex-snapshot
Functional and structural basis of extreme conservation in vertebrate 5′ untranslated regions
inferred← citeshttps://doi.org/10.1042/bst20253037openalex-snapshot
The exit from naive pluripotency: a platform for the study of enhancer mechanistics
inferred← citeshttps://doi.org/10.1051/jbio/2011010openalex-snapshot
Cis -ruptions d’éléments génomiques hautement conservés non codants à distance du gène SOX9 dans la séquence de Pierre Robin
inferred← citeshttps://doi.org/10.1073/pnas.0709398105openalex-snapshot
Possible involvement of SINEs in mammalian-specific brain formation
inferred← citeshttps://doi.org/10.1073/pnas.0812824106openalex-snapshot
Power of deep, all-exon resequencing for discovery of human trait genes
inferred← citeshttps://doi.org/10.1073/pnas.1318948111openalex-snapshot
Defining functional DNA elements in the human genome
inferred← citeshttps://doi.org/10.1073/pnas.1907418116openalex-snapshot
Long-range Pitx2c enhancer–promoter interactions prevent predisposition to atrial fibrillation
inferred← citeshttps://doi.org/10.1073/pnas.2402368121openalex-snapshot
Nr2f1 enhancers have distinct functions in controlling Nr2f1 expression during cortical development
inferred← citeshttps://doi.org/10.1074/jbc.m111.231670openalex-snapshot
Islet-1 Regulates Arx Transcription during Pancreatic Islet α-Cell Development
inferred← citeshttps://doi.org/10.1080/07391102.2008.10507218openalex-snapshot
Ultraconserved Elements Between the Genomes of the PlantsArabidopsis thalianaand Rice
inferred← citeshttps://doi.org/10.1080/15592294.2017.1411447openalex-snapshot
Evolutionary conservation of DNA methylation in CpG sites within ultraconserved noncoding elements
inferred← citeshttps://doi.org/10.1089/omi.2019.0156openalex-snapshot
Genetic Variations of Ultraconserved Elements in the Human Genome
inferred← citeshttps://doi.org/10.1093/bfgp/elp014openalex-snapshot
Identifying regulatory elements in eukaryotic genomes
inferred← citeshttps://doi.org/10.1093/bfgp/elp033openalex-snapshot
Pan-vertebrate conserved non-coding sequences associated with developmental regulation
inferred← citeshttps://doi.org/10.1093/bfgp/els041openalex-snapshot
Capturing the regulatory interactions of eukaryote genomes
inferred← citeshttps://doi.org/10.1093/bioinformatics/bts400openalex-snapshot
Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements
inferred← citeshttps://doi.org/10.1093/g3journal/jkab086openalex-snapshot
Ultra-conserved sequences in the genomes of highly diverse Anopheles mosquitoes, with implications for malaria vector control
inferred← citeshttps://doi.org/10.1093/gbe/evae144openalex-snapshot
Patterns of Genetic Diversity and Gene Flow Associated With an Aridity Gradient in Populations of Common Mole-rats, Cryptomys hottentotus hottentotus
inferred← citeshttps://doi.org/10.1093/gbe/evq087openalex-snapshot
Reptiles and Mammals Have Differentially Retained Long Conserved Noncoding Sequences from the Amniote Ancestor
inferred← citeshttps://doi.org/10.1093/gbe/evr053openalex-snapshot
Long Conserved Fragments Upstream of Mammalian Polyadenylation Sites
inferred← citeshttps://doi.org/10.1093/gbe/evt177openalex-snapshot
Heterogeneous Tempo and Mode of Conserved Noncoding Sequence Evolution among Four Mammalian Orders
inferred← citeshttps://doi.org/10.1093/gbe/evv011openalex-snapshot
Highly Constrained Intergenic Drosophila Ultraconserved Elements Are Candidate ncRNAs
inferred← citeshttps://doi.org/10.1093/gbe/evv150openalex-snapshot
SNP Formation Bias in the Murine Genome Provides Evidence for Parallel Evolution
inferred← citeshttps://doi.org/10.1093/gbe/evx148openalex-snapshot
Ultraconserved Sequences Associated with HoxD Cluster Have Strong Repression Activity
inferred← citeshttps://doi.org/10.1093/gigascience/giz159openalex-snapshot
A genome alignment of 120 mammals highlights ultraconserved element variability and placenta-associated enhancers
inferred← citeshttps://doi.org/10.1093/hmg/ddm336openalex-snapshot
Long, abundantly expressed non-coding transcripts are altered in cancer
inferred← citeshttps://doi.org/10.1093/hmg/ddn443openalex-snapshot
MEIS1 intronic risk haplotype associated with restless legs syndrome affects its mRNA and protein expression levels
inferred← citeshttps://doi.org/10.1093/hmg/ddt163openalex-snapshot
Comparative transgenic analysis of enhancers from the human SHOX and mouse Shox2 genomic regions
inferred← citeshttps://doi.org/10.1093/hmg/ddw216openalex-snapshot
Identification and function of enhancers in the human genome
inferred← citeshttps://doi.org/10.1093/med/9780197549469.003.0047openalex-snapshot
Transcriptional Regulation of Cortical Interneuron Development
inferred← citeshttps://doi.org/10.1093/molbev/msaa212openalex-snapshot
Recapitulating Evolutionary Divergence in a Single Cis -Regulatory Element Is Sufficient to Cause Expression Changes of the Lens Gene Tdrd7
inferred← citeshttps://doi.org/10.1093/molbev/msaf299openalex-snapshot
Modeling the Evolution of Ultraconserved Elements by Indels
inferred← citeshttps://doi.org/10.1093/molbev/msn116openalex-snapshot
Widespread Ultraconservation Divergence in Primates
inferred← citeshttps://doi.org/10.1093/molbev/msq128openalex-snapshot
The Importance of Being Cis: Evolution of Orthologous Fish and Mammalian Enhancer Activity
inferred← citeshttps://doi.org/10.1093/molbev/msq293openalex-snapshot
Enrichment of mRNA-like Noncoding RNAs in the Divergence of Drosophila Males
inferred← citeshttps://doi.org/10.1093/molbev/msr093openalex-snapshot
Positive and Negative Selection in Murine Ultraconserved Noncoding Elements
inferred← citeshttps://doi.org/10.1093/molbev/mst045openalex-snapshot
Exaptation of Transposable Elements into Novel Cis-Regulatory Elements: Is the Evidence Always Strong?
inferred← citeshttps://doi.org/10.1093/molbev/msw101openalex-snapshot
Combinatorial Gene Regulatory Functions Underlie Ultraconserved Elements in Drosophila
inferred← citeshttps://doi.org/10.1093/molbev/msy083openalex-snapshot
Neutral Theory, Transposable Elements, and Eukaryotic Genome Evolution
inferred← citeshttps://doi.org/10.1093/nar/gkad734openalex-snapshot
Epigenetic reprogramming of a distal developmental enhancer cluster drives SOX2 overexpression in breast and lung adenocarcinoma
inferred← citeshttps://doi.org/10.1093/nar/gkn148openalex-snapshot
An ultraconserved Hox–Pbx responsive element resides in the coding sequence of Hoxa2 and is active in rhombomere 4
inferred← citeshttps://doi.org/10.1093/nar/gks149openalex-snapshot
Genome-wide enhancer prediction from epigenetic signatures using genetic algorithm-optimized support vector machines
inferred← citeshttps://doi.org/10.1093/nar/gkt499openalex-snapshot
Chromatin and epigenetic features of long-range gene regulation
inferred← citeshttps://doi.org/10.1093/nar/gku209openalex-snapshot
Imogene: identification of motifs and cis-regulatory modules underlying gene co-regulation
inferred← citeshttps://doi.org/10.1093/nar/gkx1074openalex-snapshot
Conserved non-coding elements: developmental gene regulation meets genome organization
inferred← citeshttps://doi.org/10.1093/nargab/lqae074openalex-snapshot
Computational identification of ultra-conserved elements in the human genome: a hypothesis on homologous DNA pairing
inferred← citeshttps://doi.org/10.1093/nargab/lqag086openalex-snapshot
Characterizing highly conserved fragments in 3′UTRs via statistical and transfer learning approaches
inferred← citeshttps://doi.org/10.1093/schbul/sbp137openalex-snapshot
Narrowing the Boundaries of the Genetic Architecture of Schizophrenia
inferred← citeshttps://doi.org/10.1095/biolreprod.115.133173openalex-snapshot
A Novel Female-Specific and Sexual Reproduction-Associated Dmrt Gene Discovered in the Stony Coral, Euphyllia ancora1
inferred← citeshttps://doi.org/10.1098/rstb.2013.0017openalex-snapshot
Evolution of transcriptional enhancers and animal diversity
inferred← citeshttps://doi.org/10.1098/rstb.2013.0021openalex-snapshot
The mystery of extreme non-coding conservation
inferred← citeshttps://doi.org/10.1098/rstb.2013.0025openalex-snapshot
Many human accelerated regions are developmental enhancers
inferred← citeshttps://doi.org/10.1100/tsw.2011.35openalex-snapshot
The Transcribed-Ultraconserved Regions: A Novel Class of Long Noncoding RNAs Involved in Cancer Susceptibility
inferred← citeshttps://doi.org/10.1101/2020.03.22.002535openalex-snapshot
Recapitulating evolutionary divergence in a single cis -regulatory element is sufficient to cause expression changes of the lens gene Tdrd7
inferred← citeshttps://doi.org/10.1101/2020.04.23.058040openalex-snapshot
DeepArk: modeling cis -regulatory codes of model species with deep learning
inferred← citeshttps://doi.org/10.1101/2020.05.21.107961openalex-snapshot
Cis acting variation is common, can propagates across multiple regulatory layers, but is often buffered in developmental programs
inferred← citeshttps://doi.org/10.1101/2020.06.29.165878openalex-snapshot
Functional and structural basis of extreme non-coding conservation in vertebrate 5’UTRs
inferred← citeshttps://doi.org/10.1101/2023.06.08.23291052openalex-snapshot
Multi-omics analysis in human retina uncovers ultraconserved cis -regulatory elements at rare eye disease loci
inferred← citeshttps://doi.org/10.1101/233197openalex-snapshot
Structural disruption of genomic regions containing ultraconserved elements is associated with neurodevelopmental phenotypes
inferred← citeshttps://doi.org/10.1101/324582openalex-snapshot
The Sheep and the Goats: Distinguishing transcriptional enhancers in a complex chromatin landscape
inferred← citeshttps://doi.org/10.1101/683565openalex-snapshot
Large-scale dissection suggests that ultraconserved elements are dispensable for mouse embryonic stem cell survival and fitness
inferred← citeshttps://doi.org/10.1101/cshperspect.a016089openalex-snapshot
The Persistent Contributions of RNA to Eukaryotic Gen(om)e Architecture and Cellular Function
inferred← citeshttps://doi.org/10.1101/gr.077131.108openalex-snapshot
Accelerated sequence divergence of conserved genomic elements inDrosophila melanogaster
inferred← citeshttps://doi.org/10.1101/gr.080184.108openalex-snapshot
Dispensability of mammalian DNA
inferred← citeshttps://doi.org/10.1101/gr.085472.108openalex-snapshot
Multigenome DNA sequence conservation identifies Hox cis-regulatory elements
inferred← citeshttps://doi.org/10.1101/gr.108795.110openalex-snapshot
Massive turnover of functional sequence in human and other mammalian genomes
inferred← citeshttps://doi.org/10.1101/gr.129346.111openalex-snapshot
Computational analysis and characterization of UCE-like elements (ULEs) in plant genomes
inferred← citeshttps://doi.org/10.1101/gr.168930.113openalex-snapshot
Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis
inferred← citeshttps://doi.org/10.1101/gr.185272.114openalex-snapshot
The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements
inferred← citeshttps://doi.org/10.1101/gr.266171.120openalex-snapshot
Modeling transcriptional regulation of model species with deep learning
inferred← citeshttps://doi.org/10.1101/gr.266338.120openalex-snapshot
Cis -acting variation is common across regulatory layers but is often buffered during embryonic development
inferred← citeshttps://doi.org/10.1101/pdb.top083642openalex-snapshot
Identification and Computational Analysis of Gene Regulatory Elements
inferred← citeshttps://doi.org/10.1111/1755-0998.12328openalex-snapshot
Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among H ymenoptera
inferred← citeshttps://doi.org/10.1111/dgd.12662openalex-snapshot
The evolutionary origin of developmental enhancers in vertebrates: Insights from non‐model species
inferred← citeshttps://doi.org/10.1111/ede.12084openalex-snapshot
Functional analysis of limb transcriptional enhancers in the mouse
inferred← citeshttps://doi.org/10.1111/j.1365-294x.2008.03954.xopenalex-snapshot
Comparative genomics and the study of evolution by natural selection
inferred← citeshttps://doi.org/10.1111/j.1399-0004.2011.01685.xopenalex-snapshot
Screening and cell-based assessment of mutations in the Aristaless-related homeobox (ARX) gene
inferred← citeshttps://doi.org/10.1111/j.1469-1809.2011.00684.xopenalex-snapshot
Testing Rare Variants for Association with Diseases: A Bayesian Marker Selection Approach
inferred← citeshttps://doi.org/10.1111/j.1749-6632.2010.05878.xopenalex-snapshot
Disruption of long‐distance highly conserved noncoding elements in neurocristopathies
inferred← citeshttps://doi.org/10.1111/j.1749-6632.2012.06801.xopenalex-snapshot
Dorsally derived spinal interneurons in locomotor circuits
inferred← citeshttps://doi.org/10.1126/science.1241006openalex-snapshot
Fine Tuning of Craniofacial Morphology by Distant-Acting Enhancers
inferred← citeshttps://doi.org/10.1128/mcb.01525-12openalex-snapshot
Impaired In Vitro Erythropoiesis following Deletion of the Scl ( Tal1 ) +40 Enhancer Is Largely Compensated for In Vivo despite a Significant Reduction in Expression
inferred← citeshttps://doi.org/10.1136/jmg.2009.068361openalex-snapshot
Long-range regulation at the SOX9 locus in development and disease: Figure 1
inferred← citeshttps://doi.org/10.1139/g08-011openalex-snapshot
Highly similar noncoding genomic DNA sequences: ultraconserved, or merely widespread?
showing the first 200 of 301 · page through all 301
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.