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The Fecal Microbiome in Dogs with Acute Diarrhea and Idiopathic Inflammatory Bowel Disease

https://doi.org/10.1371/journal.pone.0051907

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What this work says

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inferred← citeshttps://doi.org/10.1038/s41598-022-06576-yopenalex-snapshot

The effect of a hydrolyzed protein diet on the fecal microbiota in cats with chronic enteropathy

inferred← citeshttps://doi.org/10.1038/s41598-022-08446-zopenalex-snapshot

Effect of chronic and acute enterotoxigenic E. coli challenge on growth performance, intestinal inflammation, microbiome, and metabolome of weaned piglets

inferred← citeshttps://doi.org/10.1038/s41598-023-35565-yopenalex-snapshot

Pilot evaluation of a single oral fecal microbiota transplantation for canine atopic dermatitis

inferred← citeshttps://doi.org/10.1038/s41598-023-37975-4openalex-snapshot

Effects of whole-grain cereals on fecal microbiota and short-chain fatty acids in dogs: a comparison of rye, oats and wheat

inferred← citeshttps://doi.org/10.1038/s41598-024-66652-3openalex-snapshot

Impact of acute stress on the canine gut microbiota

inferred← citeshttps://doi.org/10.1038/s41598-024-69923-1openalex-snapshot

Characterization of faecal microbiota and serum inflammatory markers in dogs diagnosed with chronic enteropathy or small-cell lymphoma: a pilot study

inferred← citeshttps://doi.org/10.1038/s41598-025-06178-4openalex-snapshot

Gut microbiota composition is related to anxiety and aggression scores in companion dogs

inferred← citeshttps://doi.org/10.1038/srep09342openalex-snapshot

The bacterial communities associated with fecal types and body weight of rex rabbits

inferred← citeshttps://doi.org/10.1038/srep19200openalex-snapshot

Does oral exposure to cadmium and lead mediate susceptibility to colitis? The dark-and-bright sides of heavy metals in gut ecology

inferred← citeshttps://doi.org/10.1038/srep34668openalex-snapshot

Pre- and post-weaning diet alters the faecal metagenome in the cat with differences in vitamin and carbohydrate metabolism gene abundances

inferred← citeshttps://doi.org/10.1039/c4fo00731jopenalex-snapshot

Beneficial effects of soy milk and fiber on high cholesterol diet-induced alteration of gut microbiota and inflammatory gene expression in rats

inferred← citeshttps://doi.org/10.1039/c7fo02004jopenalex-snapshot

The effects of a wool hydrolysate on short-chain fatty acid production and fecal microbial composition in the domestic cat ( Felis catus )

inferred← citeshttps://doi.org/10.1039/c8fo01967copenalex-snapshot

Bovine α-lactalbumin hydrolysates ameliorate obesity-associated endotoxemia and inflammation in high-fat diet-fed mice through modulation of gut microbiota

inferred← citeshttps://doi.org/10.1039/c8ra08049fopenalex-snapshot

Protective effects of SKLB023 on a mouse model of unilateral ureteral obstruction by the modulation of gut microbiota

inferred← citeshttps://doi.org/10.1053/j.tcam.2018.08.003openalex-snapshot

A Comparative Study of Serum Biochemistry, Metabolome and Microbiome Parameters of Clinically Healthy, Normal Weight, Overweight, and Obese Companion Dogs

inferred← citeshttps://doi.org/10.1055/s-0043-107905openalex-snapshot

Die intestinale Mikrobiota beim Hund

inferred← citeshttps://doi.org/10.1080/00480169.2021.1975586openalex-snapshot

The effects of raw-meat diets on the gastrointestinal microbiota of the cat and dog: a review

inferred← citeshttps://doi.org/10.1080/03079457.2018.1553294openalex-snapshot

Changes in gut bacterial communities in canaries infected by Macrorhabdus ornithogaster

inferred← citeshttps://doi.org/10.1080/1745039x.2020.1867463openalex-snapshot

Effect of dietary inclusion of dried apple pomace on faecal butyrate concentration and modulation of gut microbiota in dogs

inferred← citeshttps://doi.org/10.1080/19490976.2014.997612openalex-snapshot

Alteration of the fecal microbiota and serum metabolite profiles in dogs with idiopathic inflammatory bowel disease

inferred← citeshttps://doi.org/10.1080/19490976.2017.1334754openalex-snapshot

Randomized, controlled trial evaluating the effect of multi-strain probiotic on the mucosal microbiota in canine idiopathic inflammatory bowel disease

inferred← citeshttps://doi.org/10.1080/19490976.2018.1560754openalex-snapshot

Effects of a synbiotic on the fecal microbiome and metabolomic profiles of healthy research cats administered clindamycin: a randomized, controlled trial

inferred← citeshttps://doi.org/10.1080/19490976.2019.1704142openalex-snapshot

The canine gastrointestinal microbiota: early studies and research frontiers

inferred← citeshttps://doi.org/10.1080/19490976.2023.2295429openalex-snapshot

Gut microbiome responds to alteration in female sex hormone status and exacerbates metabolic dysfunction

inferred← citeshttps://doi.org/10.1093/femsec/fiaa212openalex-snapshot

Supplemental selenium source on gut health: insights on fecal microbiome and fermentation products of growing puppies

inferred← citeshttps://doi.org/10.1093/femsec/fiw230openalex-snapshot

Impact of cystic fibrosis disease on archaea and bacteria composition of gut microbiota

inferred← citeshttps://doi.org/10.1093/femsec/fix136openalex-snapshot

A dysbiosis index to assess microbial changes in fecal samples of dogs with chronic inflammatory enteropathy

inferred← citeshttps://doi.org/10.1093/femsec/fix173openalex-snapshot

Comparison of the intestinal mucosal microbiota in dogs diagnosed with idiopathic inflammatory bowel disease and dogs with food-responsive diarrhea before and after treatment

inferred← citeshttps://doi.org/10.1093/jas/skab379openalex-snapshot

Weight loss and high-protein, high-fiber diet consumption impact blood metabolite profiles, body composition, voluntary physical activity, fecal microbiota, and fecal metabolites of adult dogs

inferred← citeshttps://doi.org/10.1093/jas/skac424openalex-snapshot

Effects of a Saccharomyces cerevisiae fermentation product on fecal characteristics, metabolite concentrations, and microbiota populations of dogs subjected to exercise challenge

inferred← citeshttps://doi.org/10.1093/jas/skad011openalex-snapshot

Effects of a milk oligosaccharide biosimilar on fecal characteristics, microbiota, and bile acid, calprotectin, and immunoglobulin concentrations of healthy adult dogs treated with metronidazole

inferred← citeshttps://doi.org/10.1093/jas/skad073openalex-snapshot

Effects of weight loss and feeding specially formulated diets on the body composition, blood metabolite profiles, voluntary physical activity, and fecal metabolites and microbiota of obese dogs

inferred← citeshttps://doi.org/10.1093/jas/skad128openalex-snapshot

High-protein dried distillers grains in dog diets: diet digestibility and palatability, intestinal fermentation products, and fecal microbiota

inferred← citeshttps://doi.org/10.1093/jas/skad160openalex-snapshot

Effects of aLactobacillusfermentation product on the fecal characteristics, fecal microbial populations, immune function, and stress markers of adult dogs

inferred← citeshttps://doi.org/10.1093/jas/skad191openalex-snapshot

Effects of a Saccharomyces cerevisiae fermentation product on fecal characteristics, metabolite concentrations, and microbiota populations of dogs undergoing transport stress

inferred← citeshttps://doi.org/10.1093/jas/skae104openalex-snapshot

Effects of diets supplemented with bioactive peptides on nutrient digestibility, immune cell responsiveness, and fecal characteristics, microbiota, and metabolites of adult cats

inferred← citeshttps://doi.org/10.1093/jas/skae274openalex-snapshot

Effects of a veterinary gastrointestinal diet on fecal characteristics, metabolites, and microbiota concentrations of adult cats treated with metronidazole

inferred← citeshttps://doi.org/10.1093/jas/skae291openalex-snapshot

Effects of supplementation of live and heat-treated Bifidobacterium animalis subspecies lactis CECT 8145 on glycemic and insulinemic response, fecal microbiota, systemic biomarkers of inflammation, and white blood cell gene expression of adult dogs

inferred← citeshttps://doi.org/10.1093/jas/skae297openalex-snapshot

Effects of a veterinary gastrointestinal low-fat diet on fecal characteristics, metabolites, and microbiota concentrations of adult dogs treated with metronidazole

inferred← citeshttps://doi.org/10.1093/jas/skaf056openalex-snapshot

A specific blend of prebiotics and postbiotics improved the gut microbiome of dogs with soft stools in the in vitro Simulator of the Canine Intestinal Microbial Ecosystem

inferred← citeshttps://doi.org/10.1093/jas/skaf251openalex-snapshot

Effects of Bacillus coagulans (GBI-30, 6086) supplementation on apparent total tract nutrient digestibility and the fecal characteristics and metabolites, immunity, and microbiota of healthy adult dogs

inferred← citeshttps://doi.org/10.1093/jas/sky264openalex-snapshot

Effect of dietary fat to starch content on fecal microbiota composition and activity in dogs1

inferred← citeshttps://doi.org/10.1093/jas/sky437openalex-snapshot

Cholestyramine decreases apparent total tract macronutrient digestibility and alters fecal characteristics and metabolites of healthy adult dogs1

inferred← citeshttps://doi.org/10.1093/jvimsj/aalag001openalex-snapshot

Longitudinal study of diet digestibility, microbiome, and gut fermentation metabolites in growing dogs

inferred← citeshttps://doi.org/10.1093/jvimsj/aalag231openalex-snapshot

Quantitative assessment of specific bacterial taxa of the intestinal microbiota of healthy and diarrheic horses

inferred← citeshttps://doi.org/10.1093/tas/txae163openalex-snapshot

Apparent total tract nutrient digestibility of frozen raw, freeze-dried raw, fresh, and extruded dog foods and their effects on serum metabolites and fecal characteristics, metabolites, and microbiota of healthy adult dogs

inferred← citeshttps://doi.org/10.1097/mcg.0000000000001023openalex-snapshot

Clinical and Microbiological Effect of a Multispecies Probiotic Supplementation in Celiac Patients With Persistent IBS-type Symptoms

inferred← citeshttps://doi.org/10.1101/2021.08.26.457881openalex-snapshot

Development and Characterization of a Weaned Pig Model of Shiga Toxin–Producing E. coli-Induced Gastrointestinal Disease

inferred← citeshttps://doi.org/10.1101/2022.08.02.502164openalex-snapshot

Taxonomic, genomic, and functional variation in the gut microbiomes of wild spotted hyenas across two decades of study

inferred← citeshttps://doi.org/10.1101/2025.09.23.677982openalex-snapshot

Toxoplasma gondii disrupts vitamin B and K2 biosynthetic pathways in feline gut microbiota: microbial adaptation

inferred← citeshttps://doi.org/10.1101/324327openalex-snapshot

Anti-aging food that improves markers of health in senior dogs by modulating gut microbiota and metabolite profiles

inferred← citeshttps://doi.org/10.1101/841742openalex-snapshot

Early-life gut dysbiosis linked to mass mortality in ostriches

inferred← citeshttps://doi.org/10.1111/1462-2920.14540openalex-snapshot

Metagenomic dissection of the canine gut microbiota: insights into taxonomic, metabolic and nutritional features

inferred← citeshttps://doi.org/10.1111/1574-6941.12067openalex-snapshot

Faecal microbiota in lean and obese dogs

inferred← citeshttps://doi.org/10.1111/1574-6941.12081openalex-snapshot

Fecal microbial communities of healthy adult dogs fed raw meat-based diets with or without inulin or yeast cell wall extracts as assessed by 454 pyrosequencing

inferred← citeshttps://doi.org/10.1111/1751-7915.13656openalex-snapshot

Catching a glimpse of the bacterial gut community of companion animals: a canine and feline perspective

inferred← citeshttps://doi.org/10.1111/asj.12817openalex-snapshot

Effect of soybean husk supplementation on the fecal fermentation metabolites and microbiota of dogs

inferred← citeshttps://doi.org/10.1111/jsap.13649openalex-snapshot

Isolation of Malassezia yeasts from dogs with gastrointestinal disease undergoing duodenal endoscopy

inferred← citeshttps://doi.org/10.1111/jvim.12236openalex-snapshot

Endoscopically Visualized Lesions, Histologic Findings, and Bacterial Invasion in the Gastrointestinal Mucosa of Dogs with Acute Hemorrhagic Diarrhea Syndrome

inferred← citeshttps://doi.org/10.1111/jvim.12563openalex-snapshot

A Prospective, Randomized, Blinded, Placebo-Controlled Pilot Study on the Effect of Enterococcus faecium on Clinical Activity and Intestinal Gene Expression in Canine Food-Responsive Chronic Enteropathy

inferred← citeshttps://doi.org/10.1111/jvim.14611openalex-snapshot

Assessment of the Fecal Microbiota in Beef Calves

inferred← citeshttps://doi.org/10.1111/jvim.14875openalex-snapshot

The Gastrointestinal Microbiome: A Review

inferred← citeshttps://doi.org/10.1111/jvim.15227openalex-snapshot

Effect of an extruded animal protein-free diet on fecal microbiota of dogs with food-responsive enteropathy

inferred← citeshttps://doi.org/10.1111/jvim.15247openalex-snapshot

Clinical utility of currently available biomarkers in inflammatory enteropathies of dogs

inferred← citeshttps://doi.org/10.1111/jvim.15291openalex-snapshot

Relationship of the mucosal microbiota to gastrointestinal inflammation and small cell intestinal lymphoma in cats

inferred← citeshttps://doi.org/10.1111/jvim.15332openalex-snapshot

Comparison of intestinal expression of the apical sodium-dependent bile acid transporter between dogs with and without chronic inflammatory enteropathy

inferred← citeshttps://doi.org/10.1111/jvim.15361openalex-snapshot

Prevalence of Clostridium perfringens netE and netF toxin genes in the feces of dogs with acute hemorrhagic diarrhea syndrome

inferred← citeshttps://doi.org/10.1111/jvim.15481openalex-snapshot

Efficacy of an orally administered anti-diarrheal probiotic paste (Pro-Kolin Advanced) in dogs with acute diarrhea: A randomized, placebo-controlled, double-blinded clinical study

inferred← citeshttps://doi.org/10.1111/jvim.15493openalex-snapshot

Longitudinal assessment of microbial dysbiosis, fecal unconjugated bile acid concentrations, and disease activity in dogs with steroid-responsive chronic inflammatory enteropathy

inferred← citeshttps://doi.org/10.1111/jvim.15520openalex-snapshot

Fecal short-chain fatty acid concentrations and dysbiosis in dogs with chronic enteropathy

inferred← citeshttps://doi.org/10.1111/jvim.15664openalex-snapshot

Metronidazole treatment of acute diarrhea in dogs: A randomized double blinded placebo-controlled clinical trial

inferred← citeshttps://doi.org/10.1111/jvim.15775openalex-snapshot

Effect of amoxicillin-clavulanic acid on clinical scores, intestinal microbiome, and amoxicillin-resistant Escherichia coli in dogs with uncomplicated acute diarrhea

inferred← citeshttps://doi.org/10.1111/jvim.15778openalex-snapshot

Dysbiosis is not present in horses with fecal water syndrome when compared to controls in spring and autumn

inferred← citeshttps://doi.org/10.1111/jvim.15871openalex-snapshot

Effects of metronidazole on the fecal microbiome and metabolome in healthy dogs

inferred← citeshttps://doi.org/10.1111/jvim.15928openalex-snapshot

Developmental stages in microbiota, bile acids, and clostridial species in healthy puppies

inferred← citeshttps://doi.org/10.1111/jvim.15982openalex-snapshot

Diagnostic value of fecal cultures in dogs with chronic diarrhea

inferred← citeshttps://doi.org/10.1111/jvim.16141openalex-snapshot

Upregulation of signal transducer and activator of transcription 3 in dogs with chronic inflammatory enteropathies

inferred← citeshttps://doi.org/10.1111/jvim.16201openalex-snapshot

Changes in the fecal microbiota in dogs with acute hemorrhagic diarrhea during an outbreak in Norway

inferred← citeshttps://doi.org/10.1111/jvim.16312openalex-snapshot

Frequency of signs of chronic gastrointestinal disease in dogs after an episode of acute hemorrhagic diarrhea

inferred← citeshttps://doi.org/10.1111/jvim.16443openalex-snapshot

Clinical evaluation and microbiota analysis in 9 dogs with antibiotic-responsive enteropathy: A prospective comparison study

inferred← citeshttps://doi.org/10.1111/jvim.17061openalex-snapshot

Safety profile and effects on the peripheral immune response of fecal microbiota transplantation in clinically healthy dogs

inferred← citeshttps://doi.org/10.1111/jvim.70123openalex-snapshot

Long-Term Follow-Up After Acute Gastroenteritis Caused by Giardia Infection in Juvenile Dogs

inferred← citeshttps://doi.org/10.1111/jvim.70138openalex-snapshot

Presence of Potential Enteropathogenic Bacteria in Cats and Association With Diarrhea in Multicat Households

inferred← citeshttps://doi.org/10.1111/vco.12367openalex-snapshot

Faecal microbiota in dogs with multicentric lymphoma

inferred← citeshttps://doi.org/10.1111/vco.12892openalex-snapshot

The animal's microbiome and cancer: A translational perspective

inferred← citeshttps://doi.org/10.1111/vco.13063openalex-snapshot

Impacts of Vincristine and Prednisolone Chemotherapy on the Canine Gut Microbiota in Dogs Undergoing Treatment for Lymphoma

inferred← citeshttps://doi.org/10.1111/vcp.13031openalex-snapshot

Analysis of the gut microbiome in dogs and cats

inferred← citeshttps://doi.org/10.1111/vcp.13099openalex-snapshot

Investigation of procalcitonin and beta‐defensin2 in the serum and feces of dogs with acute diarrhea

inferred← citeshttps://doi.org/10.1111/vec.12636openalex-snapshot

Fecal markers of inflammation, protein loss, and microbial changes in dogs with the acute hemorrhagic diarrhea syndrome (AHDS)

inferred← citeshttps://doi.org/10.11252/dobutsurinshoigaku.28.1openalex-snapshot

犬猫の腸内細菌の役目を考える－腸内環境を整えて，感染症に勝つ－:1. 犬の腸内細菌解析

inferred← citeshttps://doi.org/10.1128/9781555819286.ch29openalex-snapshot

Recent Advances and Understanding of Using Probiotic-Based Interventions to Restore Homeostasis of the Microbiome for the Prevention/Therapy of Bacterial Diseases

inferred← citeshttps://doi.org/10.1128/aem.00270-19openalex-snapshot

Viable and Total Bacterial Populations Undergo Equipment- and Time-Dependent Shifts during Milk Processing

inferred← citeshttps://doi.org/10.1128/aem.02456-15openalex-snapshot

Identification of Specialists and Abundance-Occupancy Relationships among Intestinal Bacteria of Aves , Mammalia, and Actinopterygii

inferred← citeshttps://doi.org/10.1128/iai.00060-18openalex-snapshot

Gut Microbiome Analysis Identifies Potential Etiological Factors in Acute Gastroenteritis

inferred← citeshttps://doi.org/10.1128/microbiolspec.vmbf-0025-2015openalex-snapshot

Recent Advances and Understanding of Using Probiotic-Based Interventions to Restore Homeostasis of the Microbiome for the Prevention/Therapy of Bacterial Diseases

inferred← citeshttps://doi.org/10.1128/mra.00067-21openalex-snapshot

Complete Genome Sequence of Peptacetobacter (Clostridium) hiranonis Strain DGF055142, Isolated from Dog Feces from Flagstaff, Arizona, USA, 2019

inferred← citeshttps://doi.org/10.1128/msphere.00670-20openalex-snapshot

Natural Infection with Giardia Is Associated with Altered Community Structure of the Human and Canine Gut Microbiome

inferred← citeshttps://doi.org/10.1128/msystems.00171-16openalex-snapshot

Lifestyle and Horizontal Gene Transfer-Mediated Evolution of Mucispirillum schaedleri, a Core Member of the Murine Gut Microbiota

inferred← citeshttps://doi.org/10.1128/msystems.00965-22openalex-snapshot

Taxonomic, Genomic, and Functional Variation in the Gut Microbiomes of Wild Spotted Hyenas Across 2 Decades of Study

inferred← citeshttps://doi.org/10.1128/msystems.01114-20openalex-snapshot

Microbiota Assessments for the Identification and Confirmation of Slit Defect-Causing Bacteria in Milk and Cheddar Cheese

inferred← citeshttps://doi.org/10.1128/spectrum.00590-23openalex-snapshot

Identification of Gut Microbiome and Metabolites Associated with Acute Diarrhea in Cats

inferred← citeshttps://doi.org/10.1128/spectrum.01651-22openalex-snapshot

Probiotics (Lactobacillus plantarum HNU082) Supplementation Relieves Ulcerative Colitis by Affecting Intestinal Barrier Functions, Immunity-Related Gene Expression, Gut Microbiota, and Metabolic Pathways in Mice

inferred← citeshttps://doi.org/10.1136/vr.102521openalex-snapshot

Prospective study of bacteraemia in acute haemorrhagic diarrhoea syndrome in dogs

inferred← citeshttps://doi.org/10.1136/vr.102738openalex-snapshot

Clostridium perfringens enterotoxin and Clostridium difficile toxin A/B do not play a role in acute haemorrhagic diarrhoea syndrome in dogs

inferred← citeshttps://doi.org/10.1136/vr.103826openalex-snapshot

Role of the gastrointestinal microbiota in small animal health and disease

inferred← citeshttps://doi.org/10.1136/vr.105172openalex-snapshot

Investigation of the efficacy of a dietetic food in the management of chronic enteropathies in dogs

inferred← citeshttps://doi.org/10.1136/vr.h986openalex-snapshot

Bacteria involved in acute haemorrhagic diarrhoea syndrome in dogs

inferred← citeshttps://doi.org/10.1136/vr.j2609openalex-snapshot

What is causing acute haemorrhagic diarrhoea syndrome in dogs?

inferred← citeshttps://doi.org/10.1152/ajpendo.00461.2019openalex-snapshot

Role of gut microbiota in sex- and diet-dependent metabolic disorders that lead to early mortality of androgen receptor-deficient male mice

inferred← citeshttps://doi.org/10.1152/ajprenal.00513.2015openalex-snapshot

Resistant starch alters gut microbiome and metabolomic profiles concurrent with amelioration of chronic kidney disease in rats

inferred← citeshttps://doi.org/10.1155/2013/658373openalex-snapshot

Characterization of the Fungal Microbiome (Mycobiome) in Fecal Samples from Dogs

inferred← citeshttps://doi.org/10.1177/0300985815595517openalex-snapshot

The Microbiome

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