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Evaluating Purifying Selection in the Mitochondrial DNA of Various Mammalian Species

https://doi.org/10.1371/journal.pone.0058993

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Performance evaluation of amino acid substitution matrices

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Deleterious mutations in animal mitochondrial DNA

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Evolutionary trees from DNA sequences: A maximum likelihood approach

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Nucleotide Substitution Rate of Mammalian Mitochondrial Genomes

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A Bayesian Evaluation of Human Mitochondrial Substitution Rates

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The Dawn of Human Matrilineal Diversity

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The Diversity Present in 5140 Human Mitochondrial Genomes

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Correcting for Purifying Selection: An Improved Human Mitochondrial Molecular Clock

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Ancient Voyaging and Polynesian Origins

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Comparing Phylogeny and the Predicted Pathogenicity of Protein Variations Reveals Equal Purifying Selection across the Global Human mtDNA Diversity

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mtDNA GeneExtractor: A computer tool for mtDNA gene/region information extraction

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Natural selection shaped regional mtDNA variation in humans

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Rapid, global demographic expansions after the origins of agriculture

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Bayes Factors

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PAML: a program package for phylogenetic analysis by maximum likelihood

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MRBAYES: Bayesian inference of phylogenetic trees

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Automated inference of molecular mechanisms of disease from amino acid substitutions

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Time Dependency of Molecular Evolutionary Rates? Yes and No

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Strong Variations of Mitochondrial Mutation Rate across Mammals--the Longevity Hypothesis

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Divergence Times in Caenorhabditis and Drosophila Inferred from Direct Estimates of the Neutral Mutation Rate

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inferredcites →https://doi.org/10.1093/sysbio/syq099openalex-snapshot

Bayesian Estimation of Substitution Rates from Ancient DNA Sequences with Low Information Content

inferredcites →https://doi.org/10.1098/rsbl.2007.0377openalex-snapshot

Elevated substitution rates estimated from ancient DNA sequences

inferredcites →https://doi.org/10.1098/rsbl.2008.0073openalex-snapshot

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Relaxation of selective constraint on dog mitochondrial DNA following domestication

inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05178.xopenalex-snapshot

Time-dependent rates of molecular evolution

inferredcites →https://doi.org/10.1126/science.1088434openalex-snapshot

Effects of Purifying and Adaptive Selection on Regional Variation in Human mtDNA

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CSA: An efficient algorithm to improve circular DNA multiple alignment

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Population expansion in the North African Late Pleistocene signalled by mitochondrial DNA haplogroup U6

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BEAST: Bayesian evolutionary analysis by sampling trees

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Correlates of substitution rate variation in mammalian protein-coding sequences

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Peer Review #1 of "Prolonged decay of molecular rate estimates for metazoan mitochondrial DNA (v0.1)"

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Prolonged decay of molecular rate estimates for metazoan mitochondrial DNA

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