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Effect of Artificial Selection on Runs of Homozygosity in U.S. Holstein Cattle

https://doi.org/10.1371/journal.pone.0080813
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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inferredcites →https://doi.org/10.1186/1471-2164-12-408openalex-snapshot
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Runs of Homozygosity Implicate Autozygosity as a Schizophrenia Risk Factor
inferredcites →https://doi.org/10.1371/journal.pone.0006595openalex-snapshot
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inferredcites →https://doi.org/10.1371/journal.pone.0022580openalex-snapshot
Runs of Homozygosity Do Not Influence Survival to Old Age
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Invited Review: Reliability of genomic predictions for North American Holstein bulls
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Genomic inbreeding and relationships among Holsteins, Jerseys, and Brown Swiss
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Population genetics: a concise guide

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The Relationship between Runs of Homozygosity and Inbreeding in Jersey Cattle under Selection
inferred← citeshttps://doi.org/10.1371/journal.pone.0153013openalex-snapshot
A Meta-Assembly of Selection Signatures in Cattle
inferred← citeshttps://doi.org/10.1371/journal.pone.0176780openalex-snapshot
The distribution of runs of homozygosity and selection signatures in six commercial meat sheep breeds
inferred← citeshttps://doi.org/10.1371/journal.pone.0211908openalex-snapshot
Analysis of Anasplatyrhynchos genome resequencing data reveals genetic signatures of artificial selection
inferred← citeshttps://doi.org/10.1371/journal.pone.0220996openalex-snapshot
Correction: Analysis of Anasplatyrhynchos genome resequencing data reveals genetic signatures of artificial selection
inferred← citeshttps://doi.org/10.1371/journal.pone.0227212openalex-snapshot
Selection in Australian Thoroughbred horses acts on a locus associated with early two-year old speed
inferred← citeshttps://doi.org/10.1371/journal.pone.0228964openalex-snapshot
Genetic characteristics of Jiaji Duck by whole genome re-sequencing
inferred← citeshttps://doi.org/10.1371/journal.pone.0242200openalex-snapshot
Selection signatures in two oldest Russian native cattle breeds revealed using high-density single nucleotide polymorphism analysis
inferred← citeshttps://doi.org/10.1371/journal.pone.0242500openalex-snapshot
Population demographic history and population structure for Pakistani Nili-Ravi breeding bulls based on SNP genotyping to identify genomic regions associated with male effects for milk yield and body weight
inferred← citeshttps://doi.org/10.1371/journal.pone.0271718openalex-snapshot
Genomic inbreeding and runs of homozygosity analysis of indigenous cattle populations in southern China
inferred← citeshttps://doi.org/10.1371/journal.pone.0274743openalex-snapshot
Runs of homocigosity and its association with productive traits in Mexican Holstein cattle
inferred← citeshttps://doi.org/10.1371/journal.pone.0278681openalex-snapshot
Legacies of domestication, Neolithic diffusion and trade between Indian subcontinent and Island Southeast Asia shape maternal genetic diversity of Andaman cattle
inferred← citeshttps://doi.org/10.1371/journal.pone.0323328openalex-snapshot
Genomic insights into runs of homozygosity, effective population size and selection signatures in Iranian meat and dairy sheep breeds
inferred← citeshttps://doi.org/10.1534/genetics.116.198861openalex-snapshot
Inferring Individual Inbreeding and Demographic History from Segments of Identity by Descent in Ficedula Flycatcher Genome Sequences
inferred← citeshttps://doi.org/10.1590/1519-6984.292980openalex-snapshot
Assessing runs of homozygosity reveals production traits of Kazakh sheep breeds
inferred← citeshttps://doi.org/10.1590/s0100-204x2017001100017openalex-snapshot
Genetic analysis of productive and reproductive traits in multiple-breed dairy cattle populations
inferred← citeshttps://doi.org/10.1590/s0100-204x2018000900001openalex-snapshot
Runs of homozygosity for autozygosity estimation and genomic analysis in production animals
inferred← citeshttps://doi.org/10.17221/265/2020-cjasopenalex-snapshot
The evaluation of genomic diversity and selection signals in the autochthonous Slovak Spotted cattle
inferred← citeshttps://doi.org/10.18174/428523openalex-snapshot
Exploiting whole genome sequence variants in cattle breeding : Unraveling the distribution of genetic variants and role of rare variants in genomic evaluation
inferred← citeshttps://doi.org/10.18174/469250openalex-snapshot
Genomic variation across European cattle: contribution of gene flow
inferred← citeshttps://doi.org/10.18174/523321openalex-snapshot
Genomic characterization and conservation of genetic diversity in cattle
inferred← citeshttps://doi.org/10.18174/528193openalex-snapshot
Using whole-genome sequencing data for demographic and functional evaluations of small managed populations
inferred← citeshttps://doi.org/10.18699/vjgb-23-57openalex-snapshot
Identification of homozygosity-rich regions in the Holstein genome
inferred← citeshttps://doi.org/10.20546/ijcmas.2018.708.075openalex-snapshot
Runs of Homozygosity and Genomic Inbreeding Concepts in Dairy Animal Breeding
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10412150/v1openalex-snapshot
Elucidation of Genome Wide Selection Signatures for Milk Production and Adaptive Traits in N’dama African Cattle
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10489550/v1openalex-snapshot
Unravelling Population Structures and Selection Signatures for milk production and adaptive traits in Genetically Admixed Population of Sub-Saharan African Cattle
inferred← citeshttps://doi.org/10.22319/rmcp.v10i3.4842openalex-snapshot
Genetic variability in a Holstein population using SNP markers and their use for monitoring mating strategies
inferred← citeshttps://doi.org/10.2527/jas.2015-8879openalex-snapshot
Identification of signatures of selection for intramuscular fat and backfat thickness in two Duroc populations1
inferred← citeshttps://doi.org/10.26512/abyayala.v6i1.40711openalex-snapshot
EL MODUS OPERANDI MULTICULTURALISTA DEL ESTADO EN AMÉRICA LATINA Y LA PRODUCCIÓN DE UNA ETNO-NORMATIVIDAD EN TRES LIBROS DE RECIENTE PUBLICACIÓN
inferred← citeshttps://doi.org/10.26898/0370-8799-2019-6-9openalex-snapshot
Evaluation of the individual level of homozygosity of bulls on the basis of genomic information
inferred← citeshttps://doi.org/10.31274/etd-20210609-145openalex-snapshot
Genetic and phenotypic indicator traits for reproductive performance in commercial sows
inferred← citeshttps://doi.org/10.3168/jds.2016-12164openalex-snapshot
Genome-wide mapping and estimation of inbreeding depression of semen quality traits in a cattle population
inferred← citeshttps://doi.org/10.3168/jds.2017-12787openalex-snapshot
Invited review: Inbreeding in the genomics era: Inbreeding, inbreeding depression, and management of genomic variability
inferred← citeshttps://doi.org/10.3168/jds.2020-18397openalex-snapshot
Inbreeding coefficients and runs of homozygosity islands in Brazilian water buffalo
inferred← citeshttps://doi.org/10.3168/jds.2022-22116openalex-snapshot
Genomic characterization of autozygosity and recent inbreeding trends in all major breeds of US dairy cattle
inferred← citeshttps://doi.org/10.3168/jds.2022-22159openalex-snapshot
Exploring genome-wide differentiation and signatures of selection in Italian and North American Holstein populations
inferred← citeshttps://doi.org/10.3168/jds.2023-23958openalex-snapshot
Perspective: Can we actually do anything about inbreeding?
inferred← citeshttps://doi.org/10.3168/jds.2024-24105openalex-snapshot
Signatures of positive selection after the introduction of genomic selection in the Finnish Ayrshire population
inferred← citeshttps://doi.org/10.32406/v6n3/2023/17-24/agrariacadopenalex-snapshot
Effects of inbreeding and selection on heritability estimates of production traits of Holstein cattle under selection
inferred← citeshttps://doi.org/10.33245/2310-9289-2021-166-2-7-20openalex-snapshot
The Influence of genotypic and phenotypic factors on indicators of cow comfort
inferred← citeshttps://doi.org/10.33448/rsd-v11i8.31288openalex-snapshot
Endogamia e seus efeitos na raça Holandesa
inferred← citeshttps://doi.org/10.3389/fanim.2023.1249470openalex-snapshot
Estimation of genetic parameters for parasite resistance and genome-wide identification of runs of homozygosity islands in Florida Cracker sheep
inferred← citeshttps://doi.org/10.3389/fanim.2025.1664380openalex-snapshot
Genetic insights into Alpine goats raised on Lombardy’s farms
inferred← citeshttps://doi.org/10.3389/fgene.2014.00443openalex-snapshot
Genomic adaptation of admixed dairy cattle in East Africa
inferred← citeshttps://doi.org/10.3389/fgene.2015.00005openalex-snapshot
Assessment of autozygosity in Nellore cows (Bos indicus) through high-density SNP genotypes
inferred← citeshttps://doi.org/10.3389/fgene.2015.00036openalex-snapshot
Genomic data as the “hitchhiker's guide” to cattle adaptation: tracking the milestones of past selection in the bovine genome
inferred← citeshttps://doi.org/10.3389/fgene.2015.00038openalex-snapshot
What can livestock breeders learn from conservation genetics and vice versa?
inferred← citeshttps://doi.org/10.3389/fgene.2015.00173openalex-snapshot
Genomic analysis for managing small and endangered populations: a case study in Tyrol Grey cattle
inferred← citeshttps://doi.org/10.3389/fgene.2019.00739openalex-snapshot
Autozygosity and Genetic Differentiation of Landrace and Large White Pigs as Revealed by the Genetic Analyses of Crossbreds
inferred← citeshttps://doi.org/10.3389/fgene.2020.00366openalex-snapshot
A Genetic Investigation of Island Jersey Cattle, the Foundation of the Jersey Breed: Comparing Population Structure and Selection to Guernsey, Holstein, and United States Jersey Cattle
inferred← citeshttps://doi.org/10.3389/fgene.2020.543294openalex-snapshot
Genome-Wide Population Genetic Analysis of Commercial, Indigenous, Game, and Wild Chickens Using 600K SNP Microarray Data
inferred← citeshttps://doi.org/10.3389/fgene.2020.584556openalex-snapshot
Characterization of Autozygosity in Pigs in Three-Way Crossbreeding
inferred← citeshttps://doi.org/10.3389/fgene.2021.708740openalex-snapshot
SNP-Based Genotyping Provides Insight Into the West Asian Origin of Russian Local Goats
inferred← citeshttps://doi.org/10.3389/fgene.2022.887582openalex-snapshot
Identification of Selection Signals on the X-Chromosome in East Adriatic Sheep: A New Complementary Approach
inferred← citeshttps://doi.org/10.3389/fgene.2022.993959openalex-snapshot
Genomic diversity and relationship analyses of endangered German Black Pied cattle (DSN) to 68 other taurine breeds based on whole-genome sequencing
inferred← citeshttps://doi.org/10.3389/fgene.2023.1136078openalex-snapshot
Pedigree and genome-based patterns of homozygosity in the South African Ayrshire, Holstein, and Jersey breeds
inferred← citeshttps://doi.org/10.3389/fgene.2023.1227310openalex-snapshot
Identification of runs of homozygosity associated with male fertility in Italian Brown Swiss cattle
inferred← citeshttps://doi.org/10.3389/fimmu.2026.1873273openalex-snapshot
Host- and genotype-specific transcriptomic responses to Mycoplasma bovis infection in bison and Holstein peripheral blood mononuclear cells
inferred← citeshttps://doi.org/10.3389/fpls.2020.590846openalex-snapshot
Homozygosity Mapping Reveals Population History and Trait Architecture in Self-Incompatible Pear (Pyrus spp.)
inferred← citeshttps://doi.org/10.3389/fvets.2021.773985openalex-snapshot
Genetic Diversity in the Italian Holstein Dairy Cattle Based on Pedigree and SNP Data Prior and After Genomic Selection
inferred← citeshttps://doi.org/10.3390/agriculture12091463openalex-snapshot
Long-Term Impact of Genomic Selection on Genetic Gain Using Different SNP Density
inferred← citeshttps://doi.org/10.3390/ani10030524openalex-snapshot
Genome-Wide Scan for Runs of Homozygosity Identifies Candidate Genes Related to Economically Important Traits in Chinese Merino
inferred← citeshttps://doi.org/10.3390/ani10061005openalex-snapshot
Genetic Diversity and Signatures of Selection in a Native Italian Horse Breed Based on SNP Data
inferred← citeshttps://doi.org/10.3390/ani10081425openalex-snapshot
Genome-Wide Assessment of Runs of Homozygosity in Chinese Wagyu Beef Cattle
inferred← citeshttps://doi.org/10.3390/ani11061510openalex-snapshot
Genome-Wide Patterns of Homozygosity Reveal the Conservation Status in Five Italian Goat Populations
inferred← citeshttps://doi.org/10.3390/ani12182365openalex-snapshot
Genetic Diversity and Selection Signatures in Jianchang Black Goats Revealed by Whole-Genome Sequencing Data
inferred← citeshttps://doi.org/10.3390/ani12223214openalex-snapshot
Revealing Genetic Diversity and Population Structure of Endangered Altay White-Headed Cattle Population Using 100 k SNP Markers
inferred← citeshttps://doi.org/10.3390/ani12233239openalex-snapshot
Runs of Homozygosity Analysis Reveals Genomic Diversity and Population Structure of an Indigenous Cattle Breed in Southwest China
inferred← citeshttps://doi.org/10.3390/ani12233293openalex-snapshot
Assessment and Distribution of Runs of Homozygosity in Horse Breeds Representing Different Utility Types
inferred← citeshttps://doi.org/10.3390/ani13040599openalex-snapshot
Analysis of Conservation Priorities and Runs of Homozygosity Patterns for Chinese Indigenous Chicken Breeds
inferred← citeshttps://doi.org/10.3390/ani13040753openalex-snapshot
Genome-Wide Genetic Structure of Henan Indigenous Chicken Breeds
inferred← citeshttps://doi.org/10.3390/ani13101645openalex-snapshot
Identification of Runs of Homozygosity Islands and Functional Variants in Wenchang Chicken
inferred← citeshttps://doi.org/10.3390/ani14081214openalex-snapshot
The Estimation of Genetic Parameters for Chronic Progressive Lymphedema and Body Traits in the Rhenish German Draught Horse
inferred← citeshttps://doi.org/10.3390/ani14142096openalex-snapshot
Genome-Wide Association Studies of Growth Trait Heterosis in Crossbred Meat Rabbits
inferred← citeshttps://doi.org/10.3390/ani14172621openalex-snapshot
Genomic and Conventional Inbreeding Coefficient Estimation Using Different Estimator Models in Korean Duroc, Landrace, and Yorkshire Breeds Using 70K Porcine SNP BeadChip
inferred← citeshttps://doi.org/10.3390/ani15142068openalex-snapshot
Analysis of ROH Characteristics Across Generations in Grassland-Thoroughbred Horses and Identification of Loci Associated with Athletic Traits
inferred← citeshttps://doi.org/10.3390/ani15182714openalex-snapshot
Genomic Characterization of the Kazakh Fat-Tailed Coarse-Wool Sheep Breed Using ROH Analysis
inferred← citeshttps://doi.org/10.3390/ani9080518openalex-snapshot
Genome-Wide Scan for Runs of Homozygosity Identifies Candidate Genes in Three Pig Breeds
inferred← citeshttps://doi.org/10.3390/ani9121024openalex-snapshot
A Comprehensive Analysis of Runs of Homozygosity of Eleven Cattle Breeds Representing Different Production Types
inferred← citeshttps://doi.org/10.3390/d12010008openalex-snapshot
Genomic Tools for Effective Conservation of Livestock Breed Diversity
inferred← citeshttps://doi.org/10.3390/genes11050490openalex-snapshot
Estimates of Autozygosity Through Runs of Homozygosity in Farmed Coho Salmon
inferred← citeshttps://doi.org/10.3390/genes11050577openalex-snapshot
Genome-Wide Patterns of Homozygosity and Relevant Characterizations on the Population Structure in Piétrain Pigs
inferred← citeshttps://doi.org/10.3390/genes11121480openalex-snapshot
Genome-Wide Analysis Revealed Homozygosity and Demographic History of Five Chinese Sheep Breeds Adapted to Different Environments
inferred← citeshttps://doi.org/10.4322/mp.978-65-84548-19-0.c6openalex-snapshot
Aplicações da genômica na produção animal
inferred← citeshttps://doi.org/10.51970/jasp.1390270openalex-snapshot
Çiftlik Hayvanlarında Seleksiyon İzlerinin Tanımlanmasında Kullanılan Kavram ve Yaklaşımlar
inferred← citeshttps://doi.org/10.52547/rap.13.36.137openalex-snapshot
Genome- Wide Scans of ROH Islands and Related Genes in the World's Sheep Populations
inferred← citeshttps://doi.org/10.5433/1679-0359.2020v41n6supl2p3397openalex-snapshot
Evaluation of runs of homozygosity and genomic inbreeding in Holstein cattle from Colombia
inferred← citeshttps://doi.org/10.5713/ab.20.0679openalex-snapshot
Genome-wide scan for runs of homozygosity identifies candidate genes in Wannan Black pigs
inferred← citeshttps://doi.org/10.61186/rap.14.39.121openalex-snapshot
Genome-Wide San for Detection of Runs of Homozygosity in ian Indigenous Sheep Breeds
inferred← citeshttps://doi.org/10.70675/e20b4983z86c3z4e53zaf4fz44061a479143openalex-snapshot
La diversité génétique à l’ère de la génomique : évolution de la consanguinité et ses conséquences dans trois races bovines laitières françaises
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