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COI metabarcoding primer choice affects richness and recovery of indicator taxa in freshwater systems
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-0-387-98141-3openalex-snapshot
ggplot2: Elegant Graphics for Data Analysis
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Why We Need Sustainable Networks Bridging Countries, Disciplines, Cultures and Generations for Aquatic Biomonitoring 2.0: A Perspective Derived From the DNAqua-Net COST Action
inferredcites →https://doi.org/10.1016/j.ecolind.2019.01.014openalex-snapshot
Metabarcoding of storage ethanol vs. conventional morphometric identification in relation to the use of stream macroinvertebrates as ecological indicators in forest management
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Scraping the bottom of the barrel: are rare high throughput sequences artifacts?
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Sequencing our way towards understanding global eukaryotic biodiversity
inferredcites →https://doi.org/10.1023/a:1021281508709openalex-snapshot
Influence of water chemistry and environmental degradation on macroinvertebrate assemblages in a river basin in south-east Brazil
inferredcites →https://doi.org/10.1038/ismej.2013.10openalex-snapshot
Robust estimation of microbial diversity in theory and in practice
inferredcites →https://doi.org/10.1038/ismej.2017.119openalex-snapshot
Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
inferredcites →https://doi.org/10.1038/nnano.2009.12openalex-snapshot
Continuous base identification for single-molecule nanopore DNA sequencing
inferredcites →https://doi.org/10.1038/s41559-017-0176openalex-snapshot
Connecting Earth observation to high-throughput biodiversity data
inferredcites →https://doi.org/10.1038/s41598-017-13157-xopenalex-snapshot
DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient
inferredcites →https://doi.org/10.1038/s41598-017-15823-6openalex-snapshot
DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities
inferredcites →https://doi.org/10.1038/s41598-018-22505-4openalex-snapshot
Automated high throughput animal CO1 metabarcode classification
inferredcites →https://doi.org/10.1038/s41598-018-27048-2openalex-snapshot
Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys
inferredcites →https://doi.org/10.1038/s41598-019-42455-9openalex-snapshot
Comprehensive biodiversity analysis via ultra-deep patterned flow cell technology: a case study of eDNA metabarcoding seawater
inferredcites →https://doi.org/10.1073/pnas.1406468111openalex-snapshot
Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics
inferredcites →https://doi.org/10.1086/696613openalex-snapshot
Identifying North American freshwater invertebrates using DNA barcodes: are existing COI sequence libraries fit for purpose?
inferredcites →https://doi.org/10.1093/biomet/52.3-4.591openalex-snapshot
An Analysis of Variance Test for Normality (Complete Samples)
inferredcites →https://doi.org/10.1101/081257openalex-snapshot
UNOISE2: improved error-correction for Illumina 16S and ITS amplicon sequencing
inferredcites →https://doi.org/10.1111/1755-0998.12138openalex-snapshot
Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all‐taxa biotic surveys
inferredcites →https://doi.org/10.1111/1755-0998.12240openalex-snapshot
Rapid and accurate taxonomic classification of insect (class Insecta) cytochrome c oxidase subunit 1 ( COI ) DNA barcode sequences using a naïve Bayesian classifier
inferredcites →https://doi.org/10.1111/1755-0998.12265openalex-snapshot
Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias
inferredcites →https://doi.org/10.1111/1755-0998.13008openalex-snapshot
Metabarcoding a diverse arthropod mock community
inferredcites →https://doi.org/10.1111/2041-210x.12574openalex-snapshot
The ecologist's field guide to sequence‐based identification of biodiversity
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05470.xopenalex-snapshot
Towards next‐generation biodiversity assessment using DNA metabarcoding
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05519.xopenalex-snapshot
Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next‐generation DNA sequencing
inferredcites →https://doi.org/10.1111/j.1462-2920.2009.02051.xopenalex-snapshot
Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03373.xopenalex-snapshot
454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases
inferredcites →https://doi.org/10.1111/j.2041-210x.2012.00198.xopenalex-snapshot
Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
inferredcites →https://doi.org/10.1111/mec.14478openalex-snapshot
Scaling up: A guide to high‐throughput genomic approaches for biodiversity analysis
inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
inferredcites →https://doi.org/10.1128/aem.62.2.625-630.1996openalex-snapshot
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
inferredcites →https://doi.org/10.1128/aem.64.10.3724-3730.1998openalex-snapshot
Bias in Template-to-Product Ratios in Multitemplate PCR
inferredcites →https://doi.org/10.1128/msphere.00148-18openalex-snapshot
Broadscale Ecological Patterns Are Robust to Use of Exact Sequence Variants versus Operational Taxonomic Units
inferredcites →https://doi.org/10.1146/annurev.ento.51.110104.151124openalex-snapshot
DEVELOPMENTS IN AQUATIC INSECT BIOMONITORING: A Comparative Analysis of Recent Approaches
inferredcites →https://doi.org/10.1186/1471-2180-10-189openalex-snapshot
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
inferredcites →https://doi.org/10.1186/1472-6785-12-28openalex-snapshot
Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol
inferredcites →https://doi.org/10.1186/1742-9994-10-34openalex-snapshot
A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
inferredcites →https://doi.org/10.1186/s13742-015-0086-1openalex-snapshot
Evaluating a multigene environmental DNA approach for biodiversity assessment
inferredcites →https://doi.org/10.1186/s40168-017-0237-yopenalex-snapshot
Normalization and microbial differential abundance strategies depend upon data characteristics
inferredcites →https://doi.org/10.1371/journal.pcbi.1003531openalex-snapshot
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
inferredcites →https://doi.org/10.1371/journal.pone.0017497openalex-snapshot
Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos
inferredcites →https://doi.org/10.1371/journal.pone.0130324openalex-snapshot
Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol
inferredcites →https://doi.org/10.1371/journal.pone.0138432openalex-snapshot
Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing
inferredcites →https://doi.org/10.1371/journal.pone.0200177openalex-snapshot
Over 2.5 million COI sequences in GenBank and growing
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.1890/08-1823.1openalex-snapshot
Associations between species and groups of sites: indices and statistical inference
inferredcites →https://doi.org/10.1890/12-2010.1openalex-snapshot
PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?
inferredcites →https://doi.org/10.2307/4615733openalex-snapshot
A Simple Sequentially Rejective Multiple Test Procedure
inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot
vegan: Community Ecology Package
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fenvs.2017.00011openalex-snapshot
Validation and Development of COI Metabarcoding Primers for Freshwater Macroinvertebrate Bioassessment
inferredcites →https://doi.org/10.3389/fevo.2019.00434openalex-snapshot
Studying Ecosystems With DNA Metabarcoding: Lessons From Biomonitoring of Aquatic Macroinvertebrates
inferredcites →https://doi.org/10.3389/fmicb.2017.02224openalex-snapshot
Microbiome Datasets Are Compositional: And This Is Not Optional
inferredcites →https://doi.org/10.3897/mbmg.1.14625openalex-snapshot
Short COI markers for freshwater macroinvertebrate metabarcoding
inferredcites →https://doi.org/10.3897/rio.2.e11321openalex-snapshot
DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe
inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot
Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)
inferredcites →https://doi.org/10.7287/peerj.preprints.1157openalex-snapshot
Effects of library size variance, sparsity, and compositionality on the analysis of microbiome data
inferredcites →https://doi.org/10.7287/peerj.preprints.1157v1openalex-snapshot
Effects of library size variance, sparsity, and compositionality on the analysis of microbiome data
inferredcites →https://doi.org/10.7287/peerj.preprints.2044openalex-snapshot
Validation and development of COI metabarcoding primers for freshwater macroinvertebrate bioassessment
inferredcites →https://doi.org/10.7717/peerj.2584openalex-snapshot
VSEARCH: a versatile open source tool for metagenomics
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1111/1755-0998.14023zenodo-depositor-declared
Upscaling biodiversity monitoring: Metabarcoding estimates 31,846 insect species from Malaise traps across Germany
inferred← citeshttps://doi.org/10.3897/mbmg.8.122375zenodo-depositor-declared
Autonomous samplers and environmental DNA metabarcoding: sampling day and primer choice have greatest impact on fish detection probabilities
inferred← citeshttps://doi.org/10.3897/mbmg.8.128646zenodo-depositor-declared
Benchmarking the discrimination power of commonly used markers and amplicons in marine fish (e)DNA (meta)barcoding
inferred← citeshttps://doi.org/10.1002/aqc.70174openalex-snapshot
A Degenerate Primer Set for eDNA Metabarcoding of Freshwater Amphibians, Turtles and Fish
inferred← citeshttps://doi.org/10.1002/ece3.74229openalex-snapshot
Desiccation to DNA : Bulk DNA Metabarcoding of Macroinvertebrate Egg Banks via Sugar‐Flotation Enhances Biodiversity Surveys of Dry Salt Lakes
inferred← citeshttps://doi.org/10.1002/ece3.7753openalex-snapshot
Cooking small and large portions of “biodiversity‐soup”: Miniaturized DNA metabarcoding PCRs perform as good as large‐volume PCRs
inferred← citeshttps://doi.org/10.1002/ece3.8239openalex-snapshot
Revisiting the effect of PCR replication and sequencing depth on biodiversity metrics in environmental DNA metabarcoding
inferred← citeshttps://doi.org/10.1002/edn3.177openalex-snapshot
Improved freshwater macroinvertebrate detection from environmental DNA through minimized nontarget amplification
inferred← citeshttps://doi.org/10.1002/edn3.265openalex-snapshot
Metabarcoding hyperdiverse kelp holdfast communities on temperate reefs: An experimental approach to inform future studies
inferred← citeshttps://doi.org/10.1002/edn3.296openalex-snapshot
Diet DNA reveals novel African Forest elephant ecology on the grasslands of the Congo Basin
inferred← citeshttps://doi.org/10.1002/edn3.342openalex-snapshot
Evaluation of primer pairs for eDNA‐based assessment of Ephemeroptera, Plecoptera, and Trichoptera across a biogeographically diverse region
inferred← citeshttps://doi.org/10.1002/edn3.453openalex-snapshot
DNA metabarcoding captures different macroinvertebrate biodiversity than morphological identification approaches across a continental scale
inferred← citeshttps://doi.org/10.1002/edn3.597openalex-snapshot
Using Gap Visualization to Navigate Multivariate Metabarcode Data, Select Primer Pairs, and Enhance Reference Data Quality
inferred← citeshttps://doi.org/10.1002/edn3.70029openalex-snapshot
Estimating Rapid Diversity Changes During Acute Herbicide Contamination Using Environmental DNA
inferred← citeshttps://doi.org/10.1002/edn3.70095openalex-snapshot
eDNA Replicates, Polymerase and Amplicon Size Impact Inference of Richness Across Habitats
inferred← citeshttps://doi.org/10.1002/edn3.70146openalex-snapshot
Dietary Differentiation Between Sympatric Ecotypes of Astatotilapia calliptera From Lake Masoko (Kisiba), Tanzania Revealed by Metabarcoding
inferred← citeshttps://doi.org/10.1002/edn3.70321openalex-snapshot
Passive eDNA Sampling as a Promising Tool for Standardizing Wetland Biodiversity Assessments
inferred← citeshttps://doi.org/10.1007/978-1-0716-2313-8_11openalex-snapshot
Environmental DNA from Marine Waters and Substrates: Protocols for Sampling and eDNA Extraction
inferred← citeshttps://doi.org/10.1007/978-1-0716-2871-3_1openalex-snapshot
Metabarcoding Approaches for Soil Eukaryotes, Protists, and Microfauna
inferred← citeshttps://doi.org/10.1007/s00027-023-00948-wopenalex-snapshot
Exploring macroinvertebrate biodiversity in the dynamic southern Balkan stream network of the Vjosa using preservative-based DNA metabarcoding
inferred← citeshttps://doi.org/10.1007/s00027-026-01274-7openalex-snapshot
Development of optimized COI primers for biodiversity assessment: a case study of ichthyoplankton in Vietnam
inferred← citeshttps://doi.org/10.1007/s00114-021-01734-0openalex-snapshot
Diversity and substrate-specificity of green algae and other micro-eukaryotes colonizing amphibian clutches in Germany, revealed by DNA metabarcoding
inferred← citeshttps://doi.org/10.1007/s10344-026-02118-3openalex-snapshot
The diet of free-ranging cats in Dutch open habitats: a species-level insight
inferred← citeshttps://doi.org/10.1007/s10641-022-01328-3openalex-snapshot
Bone appétit: DNA metabarcoding as a non-lethal alternative to morphological dietary assessment in Atlantic bonefish (Albula vulpes)
inferred← citeshttps://doi.org/10.1007/s10841-023-00479-7openalex-snapshot
Fecal matters: implementing classical Coleoptera species lists with metabarcoding data from passerine bird feces
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Peri-urban sustenance: unexpectedly broad overlap in dwarf chameleon (Bradypodion) diets between natural and transformed habitats
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Evaluating the Use of eDNA Metabarcoding for Monitoring Macrofouling Communities in Net Cage Aquaculture in the Yellow Sea
inferred← citeshttps://doi.org/10.1007/s12686-025-01404-7openalex-snapshot
Metabarcoding markers and a reference database for neotropical mammals
inferred← citeshttps://doi.org/10.1016/b978-0-12-819166-8.00131-6openalex-snapshot
eDNA and Bioassessment of Rivers
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.740817openalex-snapshot
Comparison of DNA metabarcoding and morphological diet analysis of lumpfish (Cyclopterus lumpus) as methods of estimating sea lice cleaning efficacy inside commercial Atlantic salmon (Salmo salar) sea cages
inferred← citeshttps://doi.org/10.1016/j.biocon.2026.111870openalex-snapshot
The pink Amazon?’ Metabarcoding reveals Rhodolith beds as hidden hotspots of global marine biodiversity
inferred← citeshttps://doi.org/10.1016/j.compbiolchem.2025.108444openalex-snapshot
Metagenomics studies in aquaculture systems: Big data analysis, bioinformatics, machine learning and quantum computing
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2026.120555openalex-snapshot
Enhancing groundwater metazoan metabarcoding through primer performance assessment and reference library updates
inferred← citeshttps://doi.org/10.1016/j.ecolind.2021.107537openalex-snapshot
How does molecular taxonomy for deriving river health indices correlate with traditional morphological taxonomy?
inferred← citeshttps://doi.org/10.1016/j.ecolind.2022.109603openalex-snapshot
Multi-marker metabarcoding resolves subtle variations in freshwater condition: Bioindicators, ecological traits, and trophic interactions
inferred← citeshttps://doi.org/10.1016/j.ecolind.2025.114092openalex-snapshot
Node taxonomic resolution affects the robustness of marine macrophyte–epifauna networks
inferred← citeshttps://doi.org/10.1016/j.ecolind.2026.114870openalex-snapshot
Environmental DNA sequences from aquatic insects indicate freshwater ecosystem state
inferred← citeshttps://doi.org/10.1016/j.envres.2023.117800openalex-snapshot
Elucidating potential bioindicators from insights in the diversity and assembly processes of prokaryotic and eukaryotic communities in the Mekong River
inferred← citeshttps://doi.org/10.1016/j.foodcont.2026.112630openalex-snapshot
Novel 12S/16S rRNA markers for quantitative metabarcoding of mammalian mixtures
inferred← citeshttps://doi.org/10.1016/j.fooweb.2024.e00373openalex-snapshot
Prey availability and diet composition of the Grey plover (Pluvialis squatarola) during migration on the South-Western Black Sea coast, Bulgaria
inferred← citeshttps://doi.org/10.1016/j.isci.2022.104848openalex-snapshot
Estimating biodiversity across the tree of life on Mount Everest’s southern flank with environmental DNA
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Assessing the efficiency of COI primers in eDNA metabarcoding for marine metazoan biodiversity
inferred← citeshttps://doi.org/10.1016/j.pecon.2021.03.001openalex-snapshot
Combining DNA and people power for healthy rivers: Implementing the STREAM community-based approach for global freshwater monitoring
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.149030openalex-snapshot
Assessing changes in stream macroinvertebrate communities across ecological gradients using morphological versus DNA metabarcoding approaches
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.166715openalex-snapshot
Anthropogenic activities altering the ecosystem in Lake Yamzhog Yumco, southern Qinghai-Tibetan Plateau
inferred← citeshttps://doi.org/10.1038/s41598-019-54532-0openalex-snapshot
Variations in terrestrial arthropod DNA metabarcoding methods recovers robust beta diversity but variable richness and site indicators
inferred← citeshttps://doi.org/10.1038/s41598-022-14915-2openalex-snapshot
Comparison of traditional and DNA metabarcoding samples for monitoring tropical soil arthropods (Formicidae, Collembola and Isoptera)
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Comparative environmental RNA and DNA metabarcoding analysis of river algae and arthropods for ecological surveys and water quality assessment
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Mock community experiments can inform on the reliability of eDNA metabarcoding data: a case study on marine phytoplankton
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Multi-method survey rediscovers critically endangered species and strengthens Madagascar's freshwater fish conservation
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Soil communities following harvest have different early successional dynamics compared with post-wildfire patterns
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From fish to invertebrates: multi-marker eDNA metabarcoding for monitoring wetland biodiversity and non-indigenous species in Macao SAR China
inferred← citeshttps://doi.org/10.1080/24750263.2021.1896795openalex-snapshot
Differential genetic variability at two mtDNA COI regions does not imply mismatches in Odonata molecular identification performances
inferred← citeshttps://doi.org/10.1086/712232openalex-snapshot
Propylene glycol-based antifreeze is an effective preservative for DNA metabarcoding of benthic arthropods
inferred← citeshttps://doi.org/10.1086/716215openalex-snapshot
Using unsorted sweep-net samples to rapidly assess macroinvertebrate biodiversity
inferred← citeshttps://doi.org/10.1093/gigascience/giac065openalex-snapshot
Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods
inferred← citeshttps://doi.org/10.1093/jee/toag264openalex-snapshot
Quantitative metabarcoding for invertebrate pest monitoring and management
inferred← citeshttps://doi.org/10.1098/rstb.2023.0118openalex-snapshot
Three steps towards comparability and standardization among molecular methods for characterizing insect communities
inferred← citeshttps://doi.org/10.1101/2020.03.16.993667openalex-snapshot
The utility of a metagenomics approach for marine biomonitoring
inferred← citeshttps://doi.org/10.1101/2021.05.16.444374openalex-snapshot
Environmental DNA (eDNA) metabarcoding surveys extend the range of invasion for non-indigenous freshwater species in Eastern Europe
inferred← citeshttps://doi.org/10.1101/2021.12.05.471258openalex-snapshot
Mosquito excreta reveals circulation of West Nile virus and its underlying ecosystem
inferred← citeshttps://doi.org/10.1101/2024.09.02.610558openalex-snapshot
CV.eDNA: A hybrid approach to invertebrate biomonitoring using computer vision and DNA metabarcoding
inferred← citeshttps://doi.org/10.1101/2025.07.21.665925openalex-snapshot
Two decades of compositional restructuring of soil biodiversity in Germany despite stable α- and β-diversity indices
inferred← citeshttps://doi.org/10.1111/1744-7917.12992openalex-snapshot
Development of a multiprimer metabarcoding approach to understanding trophic interactions in agroecosystems
inferred← citeshttps://doi.org/10.1111/1744-7917.70074openalex-snapshot
Understanding biological control function and trophic interaction dynamics of an artificially released predatory bug by DNA metabarcoding
inferred← citeshttps://doi.org/10.1111/1755-0998.13576openalex-snapshot
A high‐throughput amplicon sequencing approach for population‐wide species diversity and composition survey
inferred← citeshttps://doi.org/10.1111/1755-0998.13694openalex-snapshot
Comparison of destructive and nondestructive DNA extraction methods for the metabarcoding of arthropod bulk samples
inferred← citeshttps://doi.org/10.1111/1755-0998.13716openalex-snapshot
Analysis of trapped mosquito excreta as a noninvasive method to reveal biodiversity and arbovirus circulation
inferred← citeshttps://doi.org/10.1111/1755-0998.13746openalex-snapshot
Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses
inferred← citeshttps://doi.org/10.1111/1755-0998.13771openalex-snapshot
A needle in a haystack: A new metabarcoding approach to survey diversity at the species level of Arcellinida (Amoebozoa: Tubulinea)
inferred← citeshttps://doi.org/10.1111/1755-0998.13839openalex-snapshot
Merging two eDNA metabarcoding approaches and citizen‐science‐based sampling to facilitate fish community monitoring along vast Sub‐Saharan coastlines
inferred← citeshttps://doi.org/10.1111/2041-210x.70147openalex-snapshot
Taxon‐specific BLAST percent identity thresholds for identification of unknown sequences using metabarcoding
inferred← citeshttps://doi.org/10.1111/2041-210x.70351openalex-snapshot
Accuracy of occurrence and abundance estimates from insect metabarcoding
inferred← citeshttps://doi.org/10.1111/aje.13233openalex-snapshot
An assessment of South African small mammal barcode sequence libraries: Implications for future carnivore diet analyses by DNA
inferred← citeshttps://doi.org/10.1111/icad.12710openalex-snapshot
DNA metabarcoding and morphological identification reveal similar richness, taxonomic composition and body size patterns among flying insect communities
inferred← citeshttps://doi.org/10.1111/icad.12726openalex-snapshot
eDNA for monitoring and conserving terrestrial arthropods: Insights from a systematic map and barcode repositories assessments
inferred← citeshttps://doi.org/10.1111/icad.12839openalex-snapshot
Catch effectiveness, complementarity and costs of five sampling techniques for flying insects across different land use types
inferred← citeshttps://doi.org/10.1111/icad.12843openalex-snapshot
Towards DNA metabarcoding‐based haplotype for monitoring terrestrial arthropod communities
inferred← citeshttps://doi.org/10.1111/icad.70006openalex-snapshot
Integrating eDNA and community science to monitor urban Odonata diversity
inferred← citeshttps://doi.org/10.1111/mec.16698openalex-snapshot
DNA metabarcoding suggests adaptive seasonal variation of individual trophic traits in a critically endangered fish
inferred← citeshttps://doi.org/10.1111/mec.70377openalex-snapshot
Fine‐Scale Ecological Biomonitoring in a Large, Complex Agriculturally Impacted Watershed via eDNA Metabarcoding
inferred← citeshttps://doi.org/10.1111/mec.70379openalex-snapshot
Metabarcoding Chironomid Pupal Exuviae Enables Scalable Biomonitoring With High Comparability to Morphotaxonomy
inferred← citeshttps://doi.org/10.1111/oik.08791openalex-snapshot
Robust metagenomic evidence that local assemblage richness increases with latitude in ground‐active invertebrates of North America
inferred← citeshttps://doi.org/10.11614/ksl.2020.53.3.286openalex-snapshot
Morphological and Genetic Species Identification in the Chironomus Larvae (Diptera: Chironomidae) Found in Domestic Tap Water Purification Plants
inferred← citeshttps://doi.org/10.1186/s12859-021-04180-xopenalex-snapshot
Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets
inferred← citeshttps://doi.org/10.1186/s12915-025-02284-xopenalex-snapshot
Biomonitoring 2.0 Refined: observing local change through metaphylogeography using a community-based eDNA metabarcoding monitoring network
inferred← citeshttps://doi.org/10.1186/s44479-026-00008-xopenalex-snapshot
Annual dietary shifts of lumpfish (Cyclopterus lumpus) in salmonid sea cages detected by joint morphological and DNA metabarcoding stomach content analyses
inferred← citeshttps://doi.org/10.1201/9781003363873-7openalex-snapshot
Advancing and Integrating ‘Biomonitoring 2.0' with New Molecular Tools for Marine Biodiversity and Ecosystem Assessments
inferred← citeshttps://doi.org/10.1371/journal.pone.0235159openalex-snapshot
Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding
inferred← citeshttps://doi.org/10.1371/journal.pone.0242143openalex-snapshot
Freshwater diatom biomonitoring through benthic kick-net metabarcoding
inferred← citeshttps://doi.org/10.1371/journal.pone.0257510openalex-snapshot
Environmental DNA gives comparable results to morphology-based indices of macroinvertebrates in a large-scale ecological assessment
inferred← citeshttps://doi.org/10.1371/journal.pone.0266720openalex-snapshot
Comparing eDNA metabarcoding primers for assessing fish communities in a biodiverse estuary
inferred← citeshttps://doi.org/10.1590/1678-4685-gmb-2025-0080openalex-snapshot
The shared performance of different COI regions increases the niche breadth detectable from bat guano eDNA
inferred← citeshttps://doi.org/10.1675/063.045.0206openalex-snapshot
eDNA Metabarcoding Analyses of Diet in Yellow-Billed Loons of Northern Alaska
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3264578/v1openalex-snapshot
Assessing the impact of mining exploration infrastructure on ground-dwelling arthropod communities using DNA metabarcoding and habitat characteristics.
inferred← citeshttps://doi.org/10.2139/ssrn.5353578openalex-snapshot
Macro and Micro Fauna Biodiversity Assessment in High Conservation Value of Oil Palm Plantations, West Kalimantan, Using Environmental DNA Metabarcode
inferred← citeshttps://doi.org/10.3389/fenvs.2019.00197openalex-snapshot
Key Questions for Next-Generation Biomonitoring
inferred← citeshttps://doi.org/10.3389/fevo.2019.00395openalex-snapshot
Network-Based Biomonitoring: Exploring Freshwater Food Webs With Stable Isotope Analysis and DNA Metabarcoding
inferred← citeshttps://doi.org/10.3389/fevo.2020.00248openalex-snapshot
Putting COI Metabarcoding in Context: The Utility of Exact Sequence Variants (ESVs) in Biodiversity Analysis
inferred← citeshttps://doi.org/10.3389/fevo.2020.00276openalex-snapshot
Calibrating Environmental DNA Metabarcoding to Conventional Surveys for Measuring Fish Species Richness
inferred← citeshttps://doi.org/10.3389/fevo.2020.581835openalex-snapshot
Metabarcoding From Microbes to Mammals: Comprehensive Bioassessment on a Global Scale
inferred← citeshttps://doi.org/10.3389/fevo.2021.630560openalex-snapshot
Unearthing the Potential of Soil eDNA Metabarcoding—Towards Best Practice Advice for Invertebrate Biodiversity Assessment
inferred← citeshttps://doi.org/10.3389/fmars.2022.867893openalex-snapshot
COI Metabarcoding of Zooplankton Species Diversity for Time-Series Monitoring of the NW Atlantic Continental Shelf
inferred← citeshttps://doi.org/10.3390/d18080448openalex-snapshot
Characteristics of Zooplankton Distribution and Correlation with Stress Factors in Lake Dianchi Estuaries
inferred← citeshttps://doi.org/10.3390/jmse12112093openalex-snapshot
Advancements in DNA Metabarcoding Protocols for Monitoring Zooplankton in Marine and Brackish Environments
inferred← citeshttps://doi.org/10.3390/w13030331openalex-snapshot
Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates
inferred← citeshttps://doi.org/10.3390/w17081109openalex-snapshot
Application of eDNA Metabarcoding Technology to Monitor the Health of Aquatic Ecosystems
inferred← citeshttps://doi.org/10.3825/ece.23.21openalex-snapshot
Time-series transition of the community structure of aquatic insects at middle domain of Natori river basin in Miyagi Prefecture as revealed by eDNA metabarcoding analysis.
inferred← citeshttps://doi.org/10.3897/ab.e68634openalex-snapshot
A practical guide to DNA-based methods for biodiversity assessment
inferred← citeshttps://doi.org/10.3897/bdj.8.e50124openalex-snapshot
Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods
inferred← citeshttps://doi.org/10.3897/mbmg.5.67533openalex-snapshot
Wet grinding of invertebrate bulk samples – a scalable and cost-efficient protocol for metabarcoding and metagenomics
inferred← citeshttps://doi.org/10.3897/mbmg.5.68155openalex-snapshot
Internal transcribed spacer primer evaluation for vascular plant metabarcoding
inferred← citeshttps://doi.org/10.3897/mbmg.5.68938openalex-snapshot
The power of metabarcoding: Can we improve bioassessment and biodiversity surveys of stream macroinvertebrate communities?
inferred← citeshttps://doi.org/10.3897/mbmg.5.70063openalex-snapshot
Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates
inferred← citeshttps://doi.org/10.3897/mbmg.6.79351openalex-snapshot
A triad of kicknet sampling, eDNA metabarcoding, and predictive modeling to assess richness of mayflies, stoneflies and caddisflies in rivers
inferred← citeshttps://doi.org/10.64898/2026.01.16.699964openalex-snapshot
Extraction-free iDNA metabarcoding of small dung beetles is an efficient method for surveying arboreal mammals in tropical forests
inferred← citeshttps://doi.org/10.64898/2026.05.26.727971openalex-snapshot
Distribution and diet of Central American Clouded Tiger Cat Leopardus pardinoides oncilla via noninvasive genetics
inferred← citeshttps://doi.org/10.64898/2026.08.14.744904openalex-snapshot
Targeted hybridization capture enables comprehensive detection of freshwater bioassessment invertebrates from environmental DNA
inferred← citeshttps://doi.org/10.64898/2026.09.29.755246openalex-snapshot
Exploring nematode diversity in soils: comparison of extraction methods and sequencing protocols
inferred← citeshttps://doi.org/10.70675/1aecfc48zabb1z4d30za665z5c7e02e5ae99openalex-snapshot
Dynamique des métacommunautés dans les têtes de bassin versant fragmentées : une perspective moléculaire
inferred← citeshttps://doi.org/10.7287/peerj.9176v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.9176v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.9176v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.9176v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.9176v0.3/reviews/1openalex-snapshot
Peer Review #1 of "Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment (v0.3)"
inferred← citeshttps://doi.org/10.7287/peerj.9176v0.3/reviews/2openalex-snapshot
Peer Review #2 of "Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment (v0.3)"
inferred← citeshttps://doi.org/10.7717/peerj.15163openalex-snapshot
Assessing arthropod diversity metrics derived from stream environmental DNA: spatiotemporal variation and paired comparisons with manual sampling
inferred← citeshttps://doi.org/10.7717/peerj.7745openalex-snapshot
Validation of COI metabarcoding primers for terrestrial arthropods
inferred← citeshttps://doi.org/10.7717/peerj.9176openalex-snapshot
Aquatic insect community structure revealed by eDNA metabarcoding derives indices for environmental assessment
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