On the public citation graph

On Comparing the Shapes of Taxonomic Trees

0 signed · 116 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1093/sysbio/19.1.83openalex-snapshot

Methods for Computing Wagner Trees

inferredcites →https://doi.org/10.1111/j.1558-5646.1965.tb01722.xopenalex-snapshot

A METHOD FOR DEDUCING BRANCHING SEQUENCES IN PHYLOGENY

inferredcites →https://doi.org/10.2307/1218253openalex-snapshot

ON THE COMPARISON OF TWO CLASSIFICATIONS OF THE SAME SET OF ELEMENTS

inferredcites →https://doi.org/10.2307/2412182openalex-snapshot

A Successive Approximations Approach to Character Weighting

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1590/s1984-4689.v41.e24014zenodo-depositor-declared

Autapomorphies and the retention index: Solving a limit via l’Hôpital-Bernoulli’s rule

inferred← citeshttps://doi.org/10.1002/9781118301081.biblioopenalex-snapshot

Bibliography

inferred← citeshttps://doi.org/10.1002/tax.562018openalex-snapshot

Characters as groups: a new approach to morphological characters in phylogenetic analysis

inferred← citeshttps://doi.org/10.1006/clad.1994.1024openalex-snapshot

MONOPHYLY AND COMPARISONS BETWEEN TREES

inferred← citeshttps://doi.org/10.1006/clad.1996.0003openalex-snapshot

COMBINED AND SEPARATE ANALYSES OF MORPHOLOGICAL AND MOLECULAR DATA IN THE PLANT FAMILY RUBIACEAE

inferred← citeshttps://doi.org/10.1006/clad.1999.0098openalex-snapshot

Measuring Topological Congruence by Extending Character Techniques

inferred← citeshttps://doi.org/10.1006/clad.2000.0159openalex-snapshot

Exploring the Behavior of POY, a Program for Direct Optimization of Molecular Data

inferred← citeshttps://doi.org/10.1006/cogp.1997.0651openalex-snapshot

The Tree of Life: Universal and Cultural Features of Folkbiological Taxonomies and Inductions

inferred← citeshttps://doi.org/10.1006/jhev.1997.0171openalex-snapshot

Phylogenetic relationships of the macaques (Cercopithecidae: ), as revealed by high resolution restriction site mapping of mitochondrial ribosomal genes

inferred← citeshttps://doi.org/10.1007/3-540-45655-4_42openalex-snapshot

Supertrees by Flipping

inferred← citeshttps://doi.org/10.1007/978-1-4020-2330-9_19openalex-snapshot

Supertrees, Components and Three-Item Data

inferred← citeshttps://doi.org/10.1007/978-1-4684-8768-8_27openalex-snapshot

Evolutionary Relationships of Enzymes in the Genus Drosophila

inferred← citeshttps://doi.org/10.1007/978-3-642-13214-8_17openalex-snapshot

The Median of the Distance between Two Leaves in a Phylogenetic Tree

inferred← citeshttps://doi.org/10.1007/978-3-662-10619-8_3openalex-snapshot

Additive-Tree Representations

inferred← citeshttps://doi.org/10.1007/978-94-009-1934-1_9openalex-snapshot

Comparison of ordinations and classifications of vegetation data

inferred← citeshttps://doi.org/10.1007/bf00031684openalex-snapshot

Comparison of ordinations and classifications of vegetation data

inferred← citeshttps://doi.org/10.1007/bf00056144openalex-snapshot

Unrooted trees revisited: Topology and poetic data

inferred← citeshttps://doi.org/10.1007/bf01733889openalex-snapshot

Construction of phylogenetic trees for proteins and nucleic acids: Empirical evaluation of alternative matrix methods

inferred← citeshttps://doi.org/10.1007/bf02459446openalex-snapshot

Consensusn-trees

inferred← citeshttps://doi.org/10.1007/bf02462079openalex-snapshot

s-Consensus trees and indices

inferred← citeshttps://doi.org/10.1007/bfb0069548openalex-snapshot

Comparing the shapes of trees

inferred← citeshttps://doi.org/10.1007/s00285-009-0295-2openalex-snapshot

Nodal distances for rooted phylogenetic trees

inferred← citeshttps://doi.org/10.1007/s00606-004-0204-5openalex-snapshot

Phylogeny of the tribe Colletieae (Rhamnaceae) ? a sensitivity analysis of the plastid region trnL-trnF combined with morphology

inferred← citeshttps://doi.org/10.1016/0022-5193(78)90137-6openalex-snapshot

On the similarity of dendrograms

inferred← citeshttps://doi.org/10.1016/0022-5193(82)90197-7openalex-snapshot

Quantitative matrix comparisons in ecological and evolutionary investigations

inferred← citeshttps://doi.org/10.1016/0025-5564(82)90112-2openalex-snapshot

Consensus indices for comparing classifications

inferred← citeshttps://doi.org/10.1016/0166-218x(82)90050-6openalex-snapshot

Distances between trees

inferred← citeshttps://doi.org/10.1016/1055-7903(92)90035-fopenalex-snapshot

Phylogenetic inference based on matrix representation of trees

inferred← citeshttps://doi.org/10.1016/b978-0-12-289665-1.50008-3openalex-snapshot

Comparisons of Classifications

inferred← citeshttps://doi.org/10.1016/b978-0-12-289665-1.50022-8openalex-snapshot

Future of Numerical Taxonomy

inferred← citeshttps://doi.org/10.1016/b978-012618030-5/50008-3openalex-snapshot

MEASURES OF HOMOPLASY

inferred← citeshttps://doi.org/10.1016/j.aml.2012.04.013openalex-snapshot

The expected value under the Yule model of the squared path-difference distance

inferred← citeshttps://doi.org/10.1016/j.ins.2009.09.013openalex-snapshot

Path lengths in tree-child time consistent hybridization networks

inferred← citeshttps://doi.org/10.1016/j.jbi.2005.08.008openalex-snapshot

Tree disagreement: Measuring and testing incongruence in phylogenies

inferred← citeshttps://doi.org/10.1016/j.jmaa.2010.05.001openalex-snapshot

The mean value of the squared path-difference distance for rooted phylogenetic trees

inferred← citeshttps://doi.org/10.1016/j.ympev.2004.04.011openalex-snapshot

Relative character-state space, amount of potential phylogenetic information, and heterogeneity of nucleotide and amino acid characters

inferred← citeshttps://doi.org/10.1016/j.ympev.2009.12.010openalex-snapshot

A plastid tree can bring order to the chaotic generic taxonomy of Rytidosperma Steud. s.l. (Poaceae)

inferred← citeshttps://doi.org/10.1016/j.ympev.2014.04.029openalex-snapshot

Disparate parametric branch-support values from ambiguous characters

inferred← citeshttps://doi.org/10.1016/j.ympev.2014.06.002openalex-snapshot

Dubious resolution and support from published sparse supermatrices: The importance of thorough tree searches

inferred← citeshttps://doi.org/10.1016/j.ympev.2015.12.013openalex-snapshot

The effects of subsampling gene trees on coalescent methods applied to ancient divergences

inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107086openalex-snapshot

Assessing topological congruence among concatenation-based phylogenomic approaches in empirical datasets

inferred← citeshttps://doi.org/10.1016/s0040-5809(02)00005-9openalex-snapshot

Statistics for phylogenetic trees

inferred← citeshttps://doi.org/10.1016/s0092-8240(84)80011-7openalex-snapshot

-Consensus trees and indices

inferred← citeshttps://doi.org/10.1016/s0748-3007(03)00074-4openalex-snapshot

Data exploration in phylogenetic inference: scientific, heuristic, or neither

inferred← citeshttps://doi.org/10.1071/it97019openalex-snapshot

Cryptic species diversity and character congruence: review of the tribe Anthracini (Diptera : Bombyliidae) in Australia

inferred← citeshttps://doi.org/10.1073/pnas.96.22.12626openalex-snapshot

Macroevolution of insect–plant associations: The relevance of host biogeography to host affiliation

inferred← citeshttps://doi.org/10.1080/10635150309337openalex-snapshot

Component Coding, Three-Item Coding, and Consensus Methods

inferred← citeshttps://doi.org/10.1080/10635150309338openalex-snapshot

Popper and Systematics

inferred← citeshttps://doi.org/10.1080/10635150390238888openalex-snapshot

Canonical Phylogenetic Ordination

inferred← citeshttps://doi.org/10.1080/10635150490522737openalex-snapshot

The Information Content of Trees and Their Matrix Representations

inferred← citeshttps://doi.org/10.1080/10635150590949832openalex-snapshot

The Shape of Supertrees to Come: Tree Shape Related Properties of Fourteen Supertree Methods

inferred← citeshttps://doi.org/10.1080/106351598260662openalex-snapshot

Split Support and Split Conflict Randomization Tests in Phylogenetic Inference

inferred← citeshttps://doi.org/10.1086/322949openalex-snapshot

Systematics of Fagaceae: Phylogenetic Tests of Reproductive Trait Evolution

inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa214openalex-snapshot

A phylogenetic C interpreter for TNT

inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa614openalex-snapshot

Information theoretic generalized Robinson–Foulds metrics for comparing phylogenetic trees

inferred← citeshttps://doi.org/10.1093/sysbio/29.3.288openalex-snapshot

Congruence Between Morphometric and Allozyme Data for Menidia Species: A Reappraisal

inferred← citeshttps://doi.org/10.1093/sysbio/31.2.136openalex-snapshot

An Electrophoretic Analysis of Rhagoletis (Diptera: Tephritidae) Phylogeny

inferred← citeshttps://doi.org/10.1093/sysbio/33.1.30openalex-snapshot

A New Look at the Predictive Value of Numerical Classifications

inferred← citeshttps://doi.org/10.1093/sysbio/37.4.315openalex-snapshot

Parsimony in Vicariance Biogeography: A Quantitative Method and a Greater Antillean Example

inferred← citeshttps://doi.org/10.1093/sysbio/38.1.7openalex-snapshot

A Concern for Evidence and a Phylogenetic Hypothesis of Relationships among Epicrates (Boidae, Serpentes)

inferred← citeshttps://doi.org/10.1093/sysbio/41.2.158openalex-snapshot

A Statistical Framework to Test the Consensus Among Additive Trees (Cladograms)

inferred← citeshttps://doi.org/10.1093/sysbio/syp019openalex-snapshot

Homoplasy and Clade Support

inferred← citeshttps://doi.org/10.1101/766840openalex-snapshot

Tree congruence: quantifying similarity between dendrogram topologies

inferred← citeshttps://doi.org/10.1108/eb026764openalex-snapshot

HIERARCHIC AGGLOMERATIVE CLUSTERING METHODS FOR AUTOMATIC DOCUMENT CLASSIFICATION

inferred← citeshttps://doi.org/10.1109/bibe.2003.1188933openalex-snapshot

Nodal distance algorithm: calculating a phylogenetic tree comparison metric

inferred← citeshttps://doi.org/10.1109/icpr.1988.28440openalex-snapshot

Compatibility and consensus in numerical taxonomy

inferred← citeshttps://doi.org/10.1109/tcbb.2006.26openalex-snapshot

Minimum-Flip Supertrees: Complexity and Algorithms

inferred← citeshttps://doi.org/10.1109/tcbb.2008.127openalex-snapshot

Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics

inferred← citeshttps://doi.org/10.1109/tcbb.2010.60openalex-snapshot

Comparison of Galled Trees

inferred← citeshttps://doi.org/10.1109/tcbb.2018.2790957openalex-snapshot

Fast Algorithms for Computing Path-Difference Distances

inferred← citeshttps://doi.org/10.1111/brv.12257openalex-snapshot

Quantification provides a conceptual basis for convergent evolution

inferred← citeshttps://doi.org/10.1111/cla.12182openalex-snapshot

The spider tree of life: phylogeny of Araneae based on target‐gene analyses from an extensive taxon sampling

inferred← citeshttps://doi.org/10.1111/cla.12205openalex-snapshot

Weighted parsimony outperforms other methods of phylogenetic inference under models appropriate for morphology

inferred← citeshttps://doi.org/10.1111/cla.12233openalex-snapshot

Revisiting habitat and lifestyle transitions in Heteroptera (Insecta: Hemiptera): insights from a combined morphological and molecular phylogeny

inferred← citeshttps://doi.org/10.1111/cla.12477openalex-snapshot

Parsimony analysis of phylogenomic datasets (I): scripts and guidelines for using TNT (Tree Analysis using New Technology)

inferred← citeshttps://doi.org/10.1111/cla.12540openalex-snapshot

Quantification of congruence among gene trees with polytomies using overall success of resolution for phylogenomic coalescent analyses

inferred← citeshttps://doi.org/10.1111/cla.12581openalex-snapshot

Exploring the effects of weighting against homoplasy in genealogies of palaeontological phylogenetic matrices

inferred← citeshttps://doi.org/10.1111/cla.12614openalex-snapshot

On the effect of measures for comparing trees on the representation of treespace

inferred← citeshttps://doi.org/10.1111/evo.12884openalex-snapshot

Sampling diverse characters improves phylogenies: Craniodental and postcranial characters of vertebrates often imply different trees

inferred← citeshttps://doi.org/10.1111/j.1095-8312.1979.tb00051.xopenalex-snapshot

Character selection in relation to the numerical taxonomy of some male Diaspididae (Homoptera: Coccoidea)

inferred← citeshttps://doi.org/10.1111/j.1096-0031.1989.tb00481.xopenalex-snapshot

On the Information Content of Classifications

inferred← citeshttps://doi.org/10.1111/j.1096-0031.1989.tb00573.xopenalex-snapshot

THE RETENTION INDEX AND THE RESCALED CONSISTENCY INDEX

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2001.tb00105.xopenalex-snapshot

Exploring the Behavior of POY, a Program for Direct Optimization of Molecular Data

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2003.tb00311.xopenalex-snapshot

Data exploration in phylogenetic inference: scientific, heuristic, or neither

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2005.00053.xopenalex-snapshot

Sequence length variation, indel costs, and congruence in sensitivity analysis

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2007.00189.xopenalex-snapshot

Calculating SPR distances between trees

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2008.00209.xopenalex-snapshot

Weighting against homoplasy improves phylogenetic analysis of morphological data sets

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2008.00217.xopenalex-snapshot

TNT, a free program for phylogenetic analysis

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2008.00223.xopenalex-snapshot

Male vocal behavior and phylogeny in deer

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2009.00270.xopenalex-snapshot

A formula for maximum possible steps in multistate characters: isolating matrix parameter effects on measures of evolutionary convergence

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2011.00375.xopenalex-snapshot

Misleading results of likelihood‐based phylogenetic analyses in the presence of missing data

inferred← citeshttps://doi.org/10.1111/j.1558-5646.1993.tb02144.xopenalex-snapshot

SEARCHING FOR EVOLUTIONARY PATTERNS IN THE SHAPE OF A PHYLOGENETIC TREE

inferred← citeshttps://doi.org/10.1111/pala.12353openalex-snapshot

Parsimony and model‐based phylogenetic methods for morphological data: comments on O'Reilly et al.

inferred← citeshttps://doi.org/10.1111/zsc.12231openalex-snapshot

Comparing tree shapes: beyond symmetry

inferred← citeshttps://doi.org/10.1126/science.276.5310.253openalex-snapshot

Insects on Plants: Macroevolutionary Chemical Trends in Host Use

inferred← citeshttps://doi.org/10.1139/b95-125openalex-snapshot

Congruence of chloroplast DNA restriction site characters with morphological and isozyme data in Solanum sect. Lasiocarpa

inferred← citeshttps://doi.org/10.1186/1471-2105-14-3openalex-snapshot

Cophenetic metrics for phylogenetic trees, after Sokal and Rohlf

inferred← citeshttps://doi.org/10.1206/0003-0090(2006)297[0001:tatol]2.0.co;2openalex-snapshot

THE AMPHIBIAN TREE OF LIFE

inferred← citeshttps://doi.org/10.1206/0003-0090(2006)299[1:psodfa]2.0.co;2openalex-snapshot

PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)

inferred← citeshttps://doi.org/10.1523/jneurosci.13-02-00467.1993openalex-snapshot

Convergent force fields organized in the frog's spinal cord

inferred← citeshttps://doi.org/10.1600/036364406779695997openalex-snapshot

A Thorny Dilemma: Testing Alternative Intrageneric Classifications within Ziziphus (Rhamnaceae)

inferred← citeshttps://doi.org/10.1643/0045-8511(2007)7[35:ctpnwt]2.0.co;2openalex-snapshot

Casting the Percomorph Net Widely: The Importance of Broad Taxonomic Sampling in the Search for the Placement of Serranid and Percid Fishes

inferred← citeshttps://doi.org/10.20381/ruor-12181openalex-snapshot

Image segment processing for analysis and visualization

inferred← citeshttps://doi.org/10.2307/1221163openalex-snapshot

TAXONOMIC CONGRUENCE

inferred← citeshttps://doi.org/10.2307/1222393openalex-snapshot

Bessey and Engler: a numerical analysis of their classification of the flowering plants

inferred← citeshttps://doi.org/10.2307/1222541openalex-snapshot

Reply to A. G. Rodrigo's “A comment on Baum's method for combining phylogenetic trees”

inferred← citeshttps://doi.org/10.2307/2412494openalex-snapshot

Congruence Between Morphological and Allozyme Data in Evolutionary Inference and Character Evolution

inferred← citeshttps://doi.org/10.2307/2992454openalex-snapshot

Homoplasy Excess Statistics and Retention Indices: A Reply to Farris

inferred← citeshttps://doi.org/10.2478/som-1990-0003openalex-snapshot

Vegetation ecology: theory, methods and applications with reference to Fennoscandia

inferred← citeshttps://doi.org/10.31237/osf.io/7sa6dopenalex-snapshot

Comparative Cladistics: Fossils, Morphological Data Partitions and Lost Branches in the Fossil Tree of Life

inferred← citeshttps://doi.org/10.32614/cran.package.treedistopenalex-snapshot

TreeDist: Calculate and Map Distances Between Phylogenetic Trees

inferred← citeshttps://doi.org/10.48550/arxiv.1610.03217openalex-snapshot

A Corrected Parsimony Criterion for Reconstructing Phylogenies

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.