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Comparing tree shapes: beyond symmetry

https://doi.org/10.1111/zsc.12231
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
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TNT: Tree Analysis Using New Technology
inferredcites →https://doi.org/10.1080/10635150600889617openalex-snapshot
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The size of a maximum agreement subtree for random binary trees
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Temporal Congruence Revisited: Comparison of Mitochondrial DNA Sequence Divergence in Cospeciating Pocket Gophers and Their Chewing Lice
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Practical Performance of Tree Comparison Metrics
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THE RETENTION INDEX AND THE RESCALED CONSISTENCY INDEX
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COMBINABLE COMPONENT CONSENSUS
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Minority rule supertrees? MRP, Compatibility, and Minimum Flip may display the least frequent groups
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Calculating SPR distances between trees
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Weighting against homoplasy improves phylogenetic analysis of morphological data sets
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TNT, a free program for phylogenetic analysis
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A PARAMETRIC METHOD FOR ASSESSING DIVERSIFICATION-RATE VARIATION IN PHYLOGENETIC TREES
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Recovering speciation and extinction dynamics based on phylogenies
inferredcites →https://doi.org/10.1126/science.8066445openalex-snapshot
Disparate Rates of Molecular Evolution in Cospeciating Hosts and Parasites
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Refining transcriptional regulatory networks using network evolutionary models and gene histories
inferredcites →https://doi.org/10.1186/1748-7188-5-18openalex-snapshot
Robinson-Foulds Supertrees
inferredcites →https://doi.org/10.1371/journal.pone.0078122openalex-snapshot
Mapping the Shapes of Phylogenetic Trees from Human and Zoonotic RNA Viruses
inferredcites →https://doi.org/10.1371/journal.pone.0089543openalex-snapshot
Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees
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PhyloTempo: A Set of R Scripts for Assessing and Visualizing Temporal Clustering in Genealogies Inferred from Serially Sampled Viral Sequences

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.5020.1.1zenodo-depositor-declared
New species of the pirate spider genus Mimetus Hentz, 1832 from China with a cladistic hypothesis on their phylogenetic placement (Araneae, Mimetidae)
inferred← citeshttps://doi.org/10.1007/s00285-020-01488-9openalex-snapshot
On the minimum value of the Colless index and the bifurcating trees that achieve it
inferred← citeshttps://doi.org/10.1016/j.mbs.2020.108503openalex-snapshot
Squaring within the Colless index yields a better balance index
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.01.020openalex-snapshot
On defining a unique phylogenetic tree with homoplastic characters
inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa214openalex-snapshot
A phylogenetic C interpreter for TNT
inferred← citeshttps://doi.org/10.1111/cla.12524openalex-snapshot
TNT version 1.6, with a graphical interface for MacOS and Linux, including new routines in parallel
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On the effect of measures for comparing trees on the representation of treespace
inferred← citeshttps://doi.org/10.1186/s12859-020-3405-1openalex-snapshot
On Sackin’s original proposal: the variance of the leaves’ depths as a phylogenetic balance index
inferred← citeshttps://doi.org/10.1186/s13015-025-00284-8openalex-snapshot
The path-label reconciliation (PLR) dissimilarity measure for gene trees
inferred← citeshttps://doi.org/10.1371/journal.pone.0259877openalex-snapshot
Network science inspires novel tree shape statistics
inferred← citeshttps://doi.org/10.6084/m9.figshare.12186144openalex-snapshot
Additional file 1 of On Sackin’s original proposal: the variance of the leaves’ depths as a phylogenetic balance index
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