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A Framework for the Quantitative Study of Evolutionary Trees

https://doi.org/10.2307/2992396
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf01739097openalex-snapshot
Criteria for optimising phylogenetic trees and the problem of determining the root of a tree
inferredcites →https://doi.org/10.1016/0025-5564(82)90027-xopenalex-snapshot
Branch and bound algorithms to determine minimal evolutionary trees
inferredcites →https://doi.org/10.1038/321657b0openalex-snapshot
In defence of bacterial phylogeny
inferredcites →https://doi.org/10.1093/bioinformatics/3.3.183openalex-snapshot
Turbo Tree: a fast algorithm for minimal trees
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040407openalex-snapshot
Estimating the reliability of evolutionary trees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040432openalex-snapshot
Accuracy of phylogenetic trees estimated from DNA sequence data.
inferredcites →https://doi.org/10.1093/sysbio/27.4.401openalex-snapshot
Cases in which Parsimony or Compatibility Methods will be Positively Misleading
inferredcites →https://doi.org/10.1101/sqb.1987.052.01.093openalex-snapshot
Reliability of Evolutionary Trees
inferredcites →https://doi.org/10.1111/j.1096-0031.1985.tb00427.xopenalex-snapshot
TESTING METHODS OF EVOLUTIONARY TREE CONSTRUCTION
inferredcites →https://doi.org/10.1126/science.7041255openalex-snapshot
Rapid Evolution of RNA Genomes
inferredcites →https://doi.org/10.1146/annurev.ge.22.120188.002513openalex-snapshot
PHYLOGENIES FROM MOLECULAR SEQUENCES: INFERENCE AND RELIABILITY
inferredcites →https://doi.org/10.2307/2413121openalex-snapshot
Parsimony and Likelihood: An Exchange
inferredcites →https://doi.org/10.2307/2992397openalex-snapshot
The Relationship Between Simple Evolutionary Tree Models and Observable Sequence Data
inferredcites →https://doi.org/10.3109/10409238109108699openalex-snapshot
The Evolving Trna Molecul

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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A combinatorial description of the closest tree algorithm for finding evolutionary trees
inferred← citeshttps://doi.org/10.1016/0020-7519(93)90042-wopenalex-snapshot
Affinities of the Gyliauchenidae: Utility of the 18S rRNA gene for phylogenetic inference in the digenea (Platyhelminthes)
inferred← citeshttps://doi.org/10.1016/0020-7519(96)00044-6openalex-snapshot
Phylogenetic tree-building
inferred← citeshttps://doi.org/10.1016/0020-7519(96)89379-9openalex-snapshot
Phylogeny of ticks (Ixodida) inferred from nuclear ribosomal DNA
inferred← citeshttps://doi.org/10.1016/0166-6851(93)90029-wopenalex-snapshot
Phylogenetic position of the genus Perkinsus (Protista, Apicomplexa) based on small subunit ribosomal RNA
inferred← citeshttps://doi.org/10.1016/0166-6851(95)00029-zopenalex-snapshot
Characterization and detection of plant trypanosomatids by sequence analysis of the small subunit ribosomal RNA gene
inferred← citeshttps://doi.org/10.1016/0167-9473(96)88919-5openalex-snapshot
Probabilistic models in cluster analysis
inferred← citeshttps://doi.org/10.1016/0169-5347(92)90244-6openalex-snapshot
Progress with methods for constructing evolutionary trees
inferred← citeshttps://doi.org/10.1016/0169-5347(94)90036-1openalex-snapshot
Reply from G.A. Hoelzer and D.J. Melnick
inferred← citeshttps://doi.org/10.1016/0169-5347(94)90179-1openalex-snapshot
Transmission patterns of eukaryotic transposable elements: arguments for and against horizontal transfer
inferred← citeshttps://doi.org/10.1016/0169-5347(96)10006-9openalex-snapshot
Combining data in phylogenetic analysis
inferred← citeshttps://doi.org/10.1016/0305-0491(92)90061-uopenalex-snapshot
The inference of evolutionary trees from molecular data
inferred← citeshttps://doi.org/10.1016/0893-9659(92)90016-3openalex-snapshot
Spectral analysis and a closest tree method for genetic sequences
inferred← citeshttps://doi.org/10.1016/0893-9659(93)90004-7openalex-snapshot
A fourier inversion formula for evolutionary trees
inferred← citeshttps://doi.org/10.1016/b978-0-12-417163-3.00009-3openalex-snapshot
Prehistory of the Angiosperms
inferred← citeshttps://doi.org/10.1016/b978-0-12-800049-6.00215-8openalex-snapshot
Rooting Trees, Methods for
inferred← citeshttps://doi.org/10.1016/b978-012498315-1/50009-1openalex-snapshot
Phylogeny and Evolution of 12S rDNA in Gruiformes (Aves)
inferred← citeshttps://doi.org/10.1016/b978-012498315-1/50019-4openalex-snapshot
Studies of Avian Ancient DNA: From Jurassic Park to Modern Island Extinctions
inferred← citeshttps://doi.org/10.1016/b978-012618030-5/50006-xopenalex-snapshot
NONFLORAL HOMOPLASY AND EVOLUTIONARY SCENARIOS IN LIVING AND FOSSIL LAND PLANTS
inferred← citeshttps://doi.org/10.1016/j.aam.2006.10.002openalex-snapshot
Phylogenetic ideals and varieties for the general Markov model
inferred← citeshttps://doi.org/10.1016/j.aim.2018.11.021openalex-snapshot
Phylogenetic complexity of the Kimura 3-parameter model
inferred← citeshttps://doi.org/10.1016/j.exmath.2007.02.001openalex-snapshot
Topics on phylogenetic algebraic geometry
inferred← citeshttps://doi.org/10.1016/j.gene.2006.07.002openalex-snapshot
A new test of phylogenetic model fitness addresses the issue of the basal angiosperm phylogeny
inferred← citeshttps://doi.org/10.1016/j.isci.2023.108252openalex-snapshot
Revisiting mitogenome evolution in Medusozoa with eight new mitochondrial genomes
inferred← citeshttps://doi.org/10.1016/j.jbi.2005.04.001openalex-snapshot
Missing data and the design of phylogenetic analyses
inferred← citeshttps://doi.org/10.1016/j.jcta.2013.06.003openalex-snapshot
Constructive degree bounds for group-based models
inferred← citeshttps://doi.org/10.1016/j.jtbi.2009.01.021openalex-snapshot
Markov invariants and the isotropy subgroup of a quartet tree
inferred← citeshttps://doi.org/10.1016/j.jtbi.2011.12.017openalex-snapshot
Lie Markov models
inferred← citeshttps://doi.org/10.1016/j.jtbi.2015.03.024openalex-snapshot
Do tree split probabilities determine the branch lengths?
inferred← citeshttps://doi.org/10.1016/j.laa.2025.05.024openalex-snapshot
Maximal determinants of matrices over the roots of unity
inferred← citeshttps://doi.org/10.1016/j.mad.2006.11.019openalex-snapshot
Chaperonomics, a new tool to study ageing and associated diseases
inferred← citeshttps://doi.org/10.1016/j.mbs.2005.12.025openalex-snapshot
Invertibility of the TKF model of sequence evolution
inferred← citeshttps://doi.org/10.1016/j.mbs.2012.03.001openalex-snapshot
An algebraic analysis of the two state Markov model on tripod trees
inferred← citeshttps://doi.org/10.1016/j.molbiopara.2005.08.007openalex-snapshot
Environmental kinetoplastid-like 18S rRNA sequences and phylogenetic relationships among Trypanosomatidae: Paraphyly of the genus Trypanosoma
inferred← citeshttps://doi.org/10.1016/j.mycres.2006.09.015openalex-snapshot
Evolutionary relationships among species of Puccinia and Uromyces (Pucciniaceae, Uredinales) inferred from partial protein coding gene phylogenies
inferred← citeshttps://doi.org/10.1016/j.mycres.2007.03.014openalex-snapshot
A phylogenetic overview of the family Pyronemataceae (Ascomycota, Pezizales)
inferred← citeshttps://doi.org/10.1016/j.ode.2006.02.005openalex-snapshot
Evolution of flower morphology, pollen dimorphism, and nectar composition in Arcytophyllum, a distylous genus of Rubiaceae
inferred← citeshttps://doi.org/10.1016/j.parint.2007.11.004openalex-snapshot
Implications of the new eukaryotic systematics for parasitologists
inferred← citeshttps://doi.org/10.1016/j.syapm.2009.07.008openalex-snapshot
Diversity of frankiae in soils from five continents
inferred← citeshttps://doi.org/10.1016/j.tig.2003.10.003openalex-snapshot
A decade of progress in plant molecular phylogenetics
inferred← citeshttps://doi.org/10.1016/j.tplants.2005.03.006openalex-snapshot
The place of Amborella within the radiation of angiosperms
inferred← citeshttps://doi.org/10.1016/j.tree.2006.06.017openalex-snapshot
Water-flea males from the netherworld
inferred← citeshttps://doi.org/10.1016/j.tree.2006.08.004openalex-snapshot
Large-scale sequencing and the new animal phylogeny
inferred← citeshttps://doi.org/10.1016/j.tree.2007.01.012openalex-snapshot
Deciphering ancient rapid radiations
inferred← citeshttps://doi.org/10.1016/j.tree.2009.01.009openalex-snapshot
Gene tree discordance, phylogenetic inference and the multispecies coalescent
inferred← citeshttps://doi.org/10.1016/j.ympev.2003.08.004openalex-snapshot
Efficiently resolving the basal clades of a phylogenetic tree using Bayesian and parsimony approaches: a case study using mitogenomic data from 100 higher teleost fishes
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.04.011openalex-snapshot
Relative character-state space, amount of potential phylogenetic information, and heterogeneity of nucleotide and amino acid characters
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.06.015openalex-snapshot
Should we be worried about long-branch attraction in real data sets? Investigations using metazoan 18S rDNA
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.07.015openalex-snapshot
Molecular phylogeny of the speciose vole genus Microtus (Arvicolinae, Rodentia) inferred from mitochondrial DNA sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.08.017openalex-snapshot
Inferring the phylogenetic position of Boa constrictor among the Boinae
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.11.005openalex-snapshot
The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2005.04.029openalex-snapshot
The phylogenetic relationships among non-diplomystid catfishes as inferred from mitochondrial cytochrome b sequences; the search for the ictalurid sister taxon (Otophysi: Siluriformes)
inferred← citeshttps://doi.org/10.1016/j.ympev.2005.04.035openalex-snapshot
A test of morphological hypotheses for tribal and subtribal relationships of Aphidinae (Insecta: Hemiptera: Aphididae) using DNA sequences
inferred← citeshttps://doi.org/10.1016/j.ympev.2005.06.004openalex-snapshot
Evolutionary history of freshwater sculpins, genus Cottus (Teleostei; Cottidae) and related taxa, as inferred from mitochondrial DNA phylogeny
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.03.006openalex-snapshot
Seed plant phylogeny: Gnetophytes are derived conifers and a sister group to Pinaceae
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.06.001openalex-snapshot
Dissecting the ancient rapid radiation of microgastrine wasp genera using additional nuclear genes
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.06.002openalex-snapshot
Resolving the root of the avian mitogenomic tree by breaking up long branches
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.06.004openalex-snapshot
Phylogeny and evolution of life history strategies of the Parasitic Barnacles (Crustacea, Cirripedia, Rhizocephala)
inferred← citeshttps://doi.org/10.1016/j.ympev.2006.12.008openalex-snapshot
The relationships and origins of the New Zealand wattlebirds (Passeriformes, Callaeatidae) from DNA sequence analyses
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.04.022openalex-snapshot
The effect of branch lengths on phylogeny: An empirical study using highly conserved orthologs from mammalian genomes
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.08.008openalex-snapshot
More data, fewer shifts: Molecular insights into the evolution of the spinning apparatus in non-orb-weaving spiders
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.09.012openalex-snapshot
Variation patterns of the mitochondrial 16S rRNA gene with secondary structure constraints and their application to phylogeny of cyprinine fishes (Teleostei: Cypriniformes)
inferred← citeshttps://doi.org/10.1016/j.ympev.2007.11.017openalex-snapshot
Cracking the nut: Geographical adjacency of sister taxa supports vicariance in a polytomic salamander clade in the absence of node support
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.01.032openalex-snapshot
Molecular phylogeny of land and freshwater planarians (Tricladida, Platyhelminthes): From freshwater to land and back
inferred← citeshttps://doi.org/10.1016/j.ympev.2008.05.014openalex-snapshot
Reconstructing ordinal relationships in the Demospongiae using mitochondrial genomic data
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