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Molecular Phylogenetics at the Felsenstein Zone: Approaching the Strepsiptera Problem Using 5.8S and 28S rDNA Sequences

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf00160154openalex-snapshot
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
inferredcites →https://doi.org/10.1007/bf01731581openalex-snapshot
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
inferredcites →https://doi.org/10.1007/bf01734359openalex-snapshot
Evolutionary trees from DNA sequences: A maximum likelihood approach
inferredcites →https://doi.org/10.1007/bf02100115openalex-snapshot
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
inferredcites →https://doi.org/10.1007/bf02101694openalex-snapshot
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
inferredcites →https://doi.org/10.1007/bf02198856openalex-snapshot
Phylogenetic analysis using parsimony and likelihood methods
inferredcites →https://doi.org/10.1007/bf02337519openalex-snapshot
Nucleotide Sequence and Presumed Secondary Structure of the 28S rRNA of Pea Aphid: Implication for Diversification of Insect rRNA
inferredcites →https://doi.org/10.1016/0167-4781(94)90028-0openalex-snapshot
Mosquito large subunit ribosomal RNA: simultaneous alignment of primary and secondary structure
inferredcites →https://doi.org/10.1016/0169-5347(96)10041-0openalex-snapshot
Among-site rate variation and its impact on phylogenetic analyses
inferredcites →https://doi.org/10.1016/b978-1-4832-3210-2.50006-6openalex-snapshot
Mammalian Protein Metabolism
inferredcites →https://doi.org/10.1016/b978-1-4832-3211-9.50009-7openalex-snapshot
Evolution of Protein Molecules
inferredcites →https://doi.org/10.1016/c2013-0-12458-0openalex-snapshot
Mammalian Protein Metabolism
inferredcites →https://doi.org/10.1038/368696a0openalex-snapshot
Insect homeotic transformation
inferredcites →https://doi.org/10.1038/369363a0openalex-snapshot
Hobgoblin of phylogenetics?
inferredcites →https://doi.org/10.1038/373666b0openalex-snapshot
Do long branches attract flies?
inferredcites →https://doi.org/10.1038/383130a0openalex-snapshot
Inferring complex phytogenies
inferredcites →https://doi.org/10.1073/pnas.88.8.3295openalex-snapshot
Retrotransposable elements R1 and R2 interrupt the rRNA genes of most insects.
inferredcites →https://doi.org/10.1086/417338openalex-snapshot
Ribosomal DNA: Molecular Evolution and Phylogenetic Inference
inferredcites →https://doi.org/10.1093/ae/36.4.292openalex-snapshot
The Systematic Position of Strepsiptera (Insecta)
inferredcites →https://doi.org/10.1093/aesa/89.6.788openalex-snapshot
18S Ribosomal Rna Genes of Insects: Primary Structure of the Genes and Molecular Phylogeny of the Holometabola
inferredcites →https://doi.org/10.1093/bioinformatics/12.4.357openalex-snapshot
Tree View: An application to display phylogenetic trees on personal computers
inferredcites →https://doi.org/10.1093/bioinformatics/12.6.543openalex-snapshot
SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny
inferredcites →https://doi.org/10.1093/bioinformatics/13.3.235openalex-snapshot
Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
inferredcites →https://doi.org/10.1093/bioinformatics/13.4.445openalex-snapshot
DISTREE: A tool for estimating genetic distances between aligned DNA sequences
inferredcites →https://doi.org/10.1093/bioinformatics/13.5.555openalex-snapshot
PAML: a program package for phylogenetic analysis by maximum likelihood
inferredcites →https://doi.org/10.1093/genetics/141.2.771openalex-snapshot
Estimating substitution rates in ribosomal RNA genes.
inferredcites →https://doi.org/10.1093/nar/22.22.4673openalex-snapshot
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
inferredcites →https://doi.org/10.1093/nar/7.8.2213openalex-snapshot
Sequence and secondary structure of Drosophila melanogaster 5.8S and 2S rRNAs and of the processing site between them
inferredcites →https://doi.org/10.1093/nar/8.16.3565openalex-snapshot
Coding and spacer sequences in the 5.8S-2S region of Sciara coprophila ribosomal DNA
inferredcites →https://doi.org/10.1093/nar/9.19.5141openalex-snapshot
The sequence of the 5S ribosomal RNA of the crustacean Artemia salina
inferredcites →https://doi.org/10.1093/obo/9780199941728-0098openalex-snapshot
Molecular Phylogenetics
inferredcites →https://doi.org/10.1093/oxfordjournals.jhered.a111190openalex-snapshot
Signal, Noise, and Reliability in Molecular Phylogenetic Analyses
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025575openalex-snapshot
A Hidden Markov Model approach to variation among sites in rate of evolution
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025664openalex-snapshot
Quartet Puzzling: A Quartet Maximum-Likelihood Method for Reconstructing Tree Topologies
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025804openalex-snapshot
An episodic change of rDNA nucleotide substitution rate has occurred during the emergence of the insect order Diptera
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040023openalex-snapshot
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040126openalex-snapshot
A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040136openalex-snapshot
Recovering evolutionary trees under a more realistic model of sequence evolution.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040182openalex-snapshot
Tests of applicability of several substitution models for DNA sequence data.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040183openalex-snapshot
Success of maximum likelihood phylogeny inference in the four-taxon case.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040220openalex-snapshot
On the use of nucleic acid sequences to infer early branchings in the tree of life.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040261openalex-snapshot
The robustness of two phylogenetic methods: four-taxon simulations reveal a slight superiority of maximum likelihood over neighbor joining.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040454openalex-snapshot
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040480openalex-snapshot
Paired sequence difference in ribosomal RNAs: evolutionary and phylogenetic implications.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040500openalex-snapshot
Complete sequences of the rRNA genes of Drosophila melanogaster.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040505openalex-snapshot
Molecular coevolution among cryptically simple expansion segments of eukaryotic 26S/28S rRNAs.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040588openalex-snapshot
Limitations of the evolutionary parsimony method of phylogenetic analysis.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040596openalex-snapshot
Limitations of the Evolutionary Parsimony Method of Phylogenetic Analysis
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040628openalex-snapshot
Tetrapod phylogeny inferred from 18S and 28S ribosomal RNA sequences and a review of the evidence for amniote relationships.
inferredcites →https://doi.org/10.1093/sysbio/20.4.406openalex-snapshot
Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology
inferredcites →https://doi.org/10.1093/sysbio/27.4.401openalex-snapshot
Cases in which Parsimony or Compatibility Methods will be Positively Misleading
inferredcites →https://doi.org/10.1093/sysbio/40.3.257openalex-snapshot
Tree-Length Distribution Skewness: An Indicator of Phylogenetic Information
inferredcites →https://doi.org/10.1093/sysbio/44.1.17openalex-snapshot
Performance of Phylogenetic Methods in Simulation
inferredcites →https://doi.org/10.1093/sysbio/46.1.1openalex-snapshot
The Strepsiptera Problem: Phylogeny of the Holometabolous Insect Orders Inferred from 18S and 28S Ribosomal DNA Sequences and Morphology
inferredcites →https://doi.org/10.1093/sysbio/46.1.69openalex-snapshot
Is the Felsenstein Zone a Fly Trap?
inferredcites →https://doi.org/10.1093/sysbio/46.4.674openalex-snapshot
Evolution and Phylogeny of the Diptera: A Molecular Phylogenetic Analysis Using 28S rDNA Sequences
inferredcites →https://doi.org/10.1111/j.1365-2583.1993.tb00076.xopenalex-snapshot
Distribution of split 5.8S ribosomal RNA in Diptera
inferredcites →https://doi.org/10.1111/j.1365-2583.1997.tb00078.xopenalex-snapshot
Phylogenetic relationships of the Culicomorpha inferred from 18S and 5.8S ribosomal DNA sequences (Diptera: Nematocera)
inferredcites →https://doi.org/10.1111/j.1432-1033.1990.tb15393.xopenalex-snapshot
Evolution of large‐subunit rRNA structure
inferredcites →https://doi.org/10.1111/j.1432-1033.1991.tb16439.xopenalex-snapshot
The longest 18S ribosomal RNA ever known
inferredcites →https://doi.org/10.1111/j.1558-5646.1985.tb00420.xopenalex-snapshot
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
inferredcites →https://doi.org/10.1126/science.276.5310.227openalex-snapshot
Phylogenetic Methods Come of Age: Testing Hypotheses in an Evolutionary Context
inferredcites →https://doi.org/10.2307/1447682openalex-snapshot
Molecular Systematics
inferredcites →https://doi.org/10.2307/2404929openalex-snapshot
Molecular Zoology: Advances, Strategies, and Protocols.
inferredcites →https://doi.org/10.2307/2412116openalex-snapshot
Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology
inferredcites →https://doi.org/10.2307/2412923openalex-snapshot
Cases in which Parsimony or Compatibility Methods Will be Positively Misleading
inferredcites →https://doi.org/10.2307/2992321openalex-snapshot
Tree-Length Distribution Skewness: An Indicator of Phylogenetic Information
inferredcites →https://doi.org/10.2307/2992396openalex-snapshot
A Framework for the Quantitative Study of Evolutionary Trees
inferredcites →https://doi.org/10.5860/choice.29-6275openalex-snapshot
The Insects of Australia: a textbook for students and research workers

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.3702.1.5zenodo-depositor-declared
Molecular approach to identify sibling species of the Ceriodaphnia cornuta complex (Cladocera: Daphniidae) from Australia with notes on the continental endemism of this group
inferred← citeshttps://doi.org/10.1006/clad.2000.0147openalex-snapshot
The Phylogeny of the Extant Hexapod Orders
inferred← citeshttps://doi.org/10.1006/mpev.1999.0746openalex-snapshot
Nuclear Genes Resolve Mesozoic-Aged Divergences in the Insect Order Lepidoptera
inferred← citeshttps://doi.org/10.1006/mpev.2000.0873openalex-snapshot
Phylogeny of the Major Lineages of Membracoidea (Insecta: Hemiptera: Cicadomorpha) Based on 28S rDNA Sequences
inferred← citeshttps://doi.org/10.1006/mpev.2001.1080openalex-snapshot
Phylogeny of Hydradephagan Water Beetles Inferred from 18S rRNA Sequences
inferred← citeshttps://doi.org/10.1007/978-1-4614-6418-1_734-3openalex-snapshot
Protein-Coding Genes as Alternative Markers in Microbial Diversity Studies
inferred← citeshttps://doi.org/10.1007/s00239-004-0246-xopenalex-snapshot
Predicted Secondary Structure for 28S and 18S rRNA from Ichneumonoidea (Insecta: Hymenoptera: Apocrita): Impact on Sequence Alignment and Phylogeny Estimation
inferred← citeshttps://doi.org/10.1007/s00427-004-0461-xopenalex-snapshot
The structure of the USP/RXR of Xenos pecki indicates that Strepsiptera are not closely related to Diptera
inferred← citeshttps://doi.org/10.1007/s00436-014-3873-1openalex-snapshot
Biting midges monitoring (Diptera: Ceratopogonidae: Culicoides Latreille) in the governate of Monastir (Tunisia): species composition and molecular investigations
inferred← citeshttps://doi.org/10.1007/s00436-016-4977-6openalex-snapshot
Application of DNA barcoding for identifying forensically relevant Diptera from northern Thailand
inferred← citeshttps://doi.org/10.1007/s11033-008-9401-6openalex-snapshot
Genetic divergence and phylogenetic analysis of genus Jatropha based on nuclear ribosomal DNA ITS sequence
inferred← citeshttps://doi.org/10.1007/s12052-008-0086-zopenalex-snapshot
Evolution of Insect Eyes: Tales of Ancient Heritage, Deconstruction, Reconstruction, Remodeling, and Recycling
inferred← citeshttps://doi.org/10.1016/j.asd.2012.04.005openalex-snapshot
The thoracic skeleto-muscular system of Mengenilla (Strepsiptera: Mengenillidae) and its phylogenetic implications
inferred← citeshttps://doi.org/10.1016/j.gene.2006.04.005openalex-snapshot
The mitochondrial genome of the entomophagous endoparasite Xenos vesparum (Insecta: Strepsiptera)
inferred← citeshttps://doi.org/10.1016/j.ympev.2004.08.004openalex-snapshot
Characterizing regions of ambiguous alignment caused by the expansion and contraction of hairpin-stem loops in ribosomal RNA molecules
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.03.024openalex-snapshot
Ribosomal protein genes of holometabolan insects reject the Halteria, instead revealing a close affinity of Strepsiptera with Coleoptera
inferred← citeshttps://doi.org/10.1016/j.zool.2007.08.003openalex-snapshot
Towards an 18S phylogeny of hexapods: Accounting for group-specific character covariance in optimized mixed nucleotide/doublet models
inferred← citeshttps://doi.org/10.1016/s0959-437x(98)80028-2openalex-snapshot
How good are deep phylogenetic trees?
inferred← citeshttps://doi.org/10.1016/s1016-8478(23)13529-1openalex-snapshot
Putative Secondary Structures of Unusually Long Strepsipteran SSU rRNAs and Its Phylogenetic Implications
inferred← citeshttps://doi.org/10.1016/s1055-7903(02)00335-4openalex-snapshot
Sequence and phylogenetic analysis of the complete mitochondrial genome of the flour beetle Tribolium castanaeum
inferred← citeshttps://doi.org/10.1016/s1055-7903(02)00397-4openalex-snapshot
Can the current molecular arsenal adequately track rapid divergence events within Simuliidae (Diptera)?
inferred← citeshttps://doi.org/10.1023/a:1014980515922openalex-snapshot
Painting analysis of meiotic metaphase I configurations of the germ line-limited chromosomes in Acricotopus
inferred← citeshttps://doi.org/10.1023/a:1016890509443openalex-snapshot
Molecular DNA Markers in Phylogeny and Systematics
inferred← citeshttps://doi.org/10.1046/j.0300-3256.2001.00078.xopenalex-snapshot
Phylogeny of the Strepsiptera based on morphological data of the first instar larvae
inferred← citeshttps://doi.org/10.1046/j.0300-3256.2001.00093.xopenalex-snapshot
Phylogeny of the holometabolous insect orders: molecular evidence
inferred← citeshttps://doi.org/10.1046/j.1365-2583.1999.00149.xopenalex-snapshot
Intron insertion as a phylogenetic character: the engrailed homeobox of Strepsiptera does not indicate affinity with Diptera
inferred← citeshttps://doi.org/10.1046/j.1420-9101.2001.00306.xopenalex-snapshot
Selection of evolutionary models for phylogenetic hypothesis testing using parametric methods
inferred← citeshttps://doi.org/10.1051/parasite/2017020openalex-snapshot
Molecular phylogeny of 42 species ofCulicoides(Diptera, Ceratopogonidae) from three continents
inferred← citeshttps://doi.org/10.1071/9780643090088.part03openalex-snapshot
Molecular Phylogenetics
inferred← citeshttps://doi.org/10.1080/10635150490445922openalex-snapshot
Aligned 18S and Insect Phylogeny
inferred← citeshttps://doi.org/10.1080/10635150500541730openalex-snapshot
Multiple Sequence Alignment Accuracy and Phylogenetic Inference
inferred← citeshttps://doi.org/10.1080/10635150701281102openalex-snapshot
Alignment and Topological Accuracy of the Direct Optimization approach via POY and Traditional Phylogenetics via ClustalW + PAUP*
inferred← citeshttps://doi.org/10.1093/molbev/msi152openalex-snapshot
A Secondary Structural Model of the 28S rRNA Expansion Segments D2 and D3 for Chalcidoid Wasps (Hymenoptera: Chalcidoidea)
inferred← citeshttps://doi.org/10.1098/rsif.2016.0363openalex-snapshot
Progress, pitfalls and parallel universes: a history of insect phylogenetics
inferred← citeshttps://doi.org/10.1111/j.0962-1075.2004.00509.xopenalex-snapshot
A secondary structural model of the 28S rRNA expansion segments D2 and D3 from rootworms and related leaf beetles (Coleoptera: Chrysomelidae; Galerucinae)
inferred← citeshttps://doi.org/10.1111/j.1096-0031.2005.00061.xopenalex-snapshot
Poor taxon sampling, poor character sampling, and non‐repeatable analyses of a contrived dataset do not provide a more credible estimate of insect phylogeny: a reply to Kjer
inferred← citeshttps://doi.org/10.1111/j.1096-0031.2006.00132.xopenalex-snapshot
The nematode–arthropod clade revisited: phylogenomic analyses from ribosomal protein genes misled by shared evolutionary biases
inferred← citeshttps://doi.org/10.1111/j.1365-2583.2005.00591.xopenalex-snapshot
Assessing the odd secondary structural properties of nuclear small subunit ribosomal RNA sequences (18S) of the twisted‐wing parasites (Insecta: Strepsiptera)
inferred← citeshttps://doi.org/10.1111/j.1365-2583.2006.00654.xopenalex-snapshot
The rapid divergence of the ecdysone receptor is a synapomorphy for Mecopterida that clarifies the Strepsiptera problem
inferred← citeshttps://doi.org/10.1111/j.1365-2583.2006.00689.xopenalex-snapshot
Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements
inferred← citeshttps://doi.org/10.1111/j.1365-3113.2006.00341.xopenalex-snapshot
Endopterygote systematics – where do we stand and what is the goal (Hexapoda, Arthropoda)?
inferred← citeshttps://doi.org/10.1146/annurev.ento.45.1.1openalex-snapshot
The Current State Of Insect Molecular Systematics: A Thriving Tower of Babel
inferred← citeshttps://doi.org/10.1186/1471-2105-6-102openalex-snapshot
Evolutionary distance estimation and fidelity of pair wise sequence alignment
inferred← citeshttps://doi.org/10.1186/1471-2105-6-278openalex-snapshot
Multiple sequence alignment accuracy and evolutionary distance estimation
inferred← citeshttps://doi.org/10.1186/1471-2148-11-315openalex-snapshot
What is the phylogenetic signal limit from mitogenomes? The reconciliation between mitochondrial and nuclear data in the Insecta class phylogeny
inferred← citeshttps://doi.org/10.1186/1471-2148-8-118openalex-snapshot
Rooted triple consensus and anomalous gene trees
inferred← citeshttps://doi.org/10.1186/1471-2164-10-603openalex-snapshot
The mitochondrial genome of the 'twisted-wing parasite' Mengenilla australiensis (Insecta, Strepsiptera): a comparative study
inferred← citeshttps://doi.org/10.1186/1741-7007-7-34openalex-snapshot
Single-copy nuclear genes resolve the phylogeny of the holometabolous insects
inferred← citeshttps://doi.org/10.1371/journal.pone.0011887openalex-snapshot
9-Genes Reinforce the Phylogeny of Holometabola and Yield Alternate Views on the Phylogenetic Placement of Strepsiptera
inferred← citeshttps://doi.org/10.1371/journal.pone.0030288openalex-snapshot
Accounting For Alignment Uncertainty in Phylogenomics
inferred← citeshttps://doi.org/10.14411/eje.2004.018openalex-snapshot
Relationships among coleopteran suborders and major endoneopteran lineages: Evidence from hind wing characters
inferred← citeshttps://doi.org/10.2108/zsj.17.111openalex-snapshot
Evolution of Hypervariable Regions, V4 and V7, of Insect 18S rRNA and Their Phylogenetic Implications
inferred← citeshttps://doi.org/10.22215/etd/2012-09561openalex-snapshot
The evolutionary origins of vibratory signals in drepanidae caterpillars : a comparative study on morphology, phylogenetics and beahviour
inferred← citeshttps://doi.org/10.31610/trudyzin/2013.supl.2.155openalex-snapshot
System of the class Insecta: an overview of modern concepts
inferred← citeshttps://doi.org/10.3347/kjp.1999.37.4.215openalex-snapshot
General properties and phylogenetic utilities of nuclear ribosomal DNA and mitochondrial DNA commonly used in molecular systematics
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