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Comparative Mitogenomic Analysis of Heptageniid Mayflies (Insecta: Ephemeroptera): Conserved Intergenic Spacer and tRNA Gene Duplication

https://doi.org/10.3390/insects12020170
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
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Global diversity of mayflies (Ephemeroptera, Insecta) in freshwater
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The complete mitochondrial genome characterization of Thunnus obesus (Scombriformes: Scombridae) and phylogenetic analyses of Thunnus
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The complete mitochondrial genome of Parafronurus youi (Insecta: Ephemeroptera) and phylogenetic position of the Ephemeroptera
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The relation between hairpin formation by mitochondrial WANCY tRNAs and the occurrence of the light strand replication origin in Lepidosauria
inferredcites →https://doi.org/10.1016/j.gene.2014.04.059openalex-snapshot
The phylogeny of Ephemeroptera in Pterygota revealed by the mitochondrial genome of Siphluriscus chinensis (Hexapoda: Insecta)
inferredcites →https://doi.org/10.1016/j.ijbiomac.2019.01.205openalex-snapshot
Mitochondrial genome of Phalantus geniculatus (Hemiptera: Reduviidae): trnT duplication and phylogenetic implications
inferredcites →https://doi.org/10.1016/j.ijbiomac.2019.07.087openalex-snapshot
Comparative mitogenomic analysis of species in the subfamily Amphinemurinae (Plecoptera: Nemouridae) reveal conserved mitochondrial genome organization
inferredcites →https://doi.org/10.1016/j.ijbiomac.2019.08.064openalex-snapshot
Structural features and phylogenetic implications of four new mitogenomes of Centrotinae (Hemiptera: Membracidae)
inferredcites →https://doi.org/10.1016/j.ijbiomac.2020.01.307openalex-snapshot
The first mitochondrial genome for Phaudidae (Lepidoptera) with phylogenetic analyses of Zygaenoidea
inferredcites →https://doi.org/10.1016/j.ijbiomac.2020.02.017openalex-snapshot
Novel gene rearrangement pattern in Cynoglossus melampetalus mitochondrial genome: New gene order in genus Cynoglossus (Pleuronectiformes: Cynoglossidae)
inferredcites →https://doi.org/10.1016/j.ijbiomac.2020.07.149openalex-snapshot
Evolution of tRNA gene rearrangement in the mitochondrial genome of ichneumonoid wasps (Hymenoptera: Ichneumonoidea)
inferredcites →https://doi.org/10.1016/j.ijbiomac.2020.10.124openalex-snapshot
Novel gene rearrangement pattern in the mitochondrial genomes of Torleya mikhaili and Cincticostella fusca (Ephemeroptera: Ephemerellidae)
inferredcites →https://doi.org/10.1016/j.jtbi.2005.11.035openalex-snapshot
Possible multiple origins of replication in primate mitochondria: Alternative role of tRNA sequences
inferredcites →https://doi.org/10.1016/j.ygeno.2019.03.006openalex-snapshot
The mitochondrial genomes of three skippers: Insights into the evolution of the family Hesperiidae (Lepidoptera)
inferredcites →https://doi.org/10.1016/s0074-7696(08)62066-5openalex-snapshot
Animal Mitochondrial DNA: Structure and Evolution
inferredcites →https://doi.org/10.1016/s0169-5347(01)02182-6openalex-snapshot
Intramitochondrial recombination – is it why some mitochondrial genes sleep around?
inferredcites →https://doi.org/10.1038/290470a0openalex-snapshot
tRNA punctuation model of RNA processing in human mitochondria
inferredcites →https://doi.org/10.1080/01650424.2018.1475675openalex-snapshot
Position and definition of the genus Paegniodes Eaton, 1881 based on redescription on the type species Paegniodes cupulatus (Eaton, 1871) (Ephemeroptera: Heptageniidae)
inferredcites →https://doi.org/10.1080/10635150701472164openalex-snapshot
Improvement of Phylogenies after Removing Divergent and Ambiguously Aligned Blocks from Protein Sequence Alignments
inferredcites →https://doi.org/10.1080/23802359.2018.1445482openalex-snapshot
The complete mitochondrial genome of Epeorus herklotsi (Ephemeroptera: Heptageniidae) and its phylogeny
inferredcites →https://doi.org/10.1093/bioinformatics/btm573openalex-snapshot
ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/gbe/evu145openalex-snapshot
Evolutionary Dynamics of the Mitochondrial Genome in the Evaniomorpha (Hymenoptera)—A Group with an Intermediate Rate of Gene Rearrangement
inferredcites →https://doi.org/10.1093/molbev/mss020openalex-snapshot
PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses
inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
inferredcites →https://doi.org/10.1093/molbev/msx248openalex-snapshot
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
inferredcites →https://doi.org/10.1093/nar/27.8.1767openalex-snapshot
Animal mitochondrial genomes
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/nar/gkw413openalex-snapshot
tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes
inferredcites →https://doi.org/10.1093/nar/gkz173openalex-snapshot
MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1111/1755-0998.13096openalex-snapshot
PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
inferredcites →https://doi.org/10.1111/cla.12116openalex-snapshot
300 million years of diversification: elucidating the patterns of orthopteran evolution based on comprehensive taxon and gene sampling
inferredcites →https://doi.org/10.1111/syen.12203openalex-snapshot
Molecular phylogeny and morphological analysis resolve a long‐standing controversy over generic concepts in E cdyonurinae mayflies ( E phemeroptera: H eptageniidae)
inferredcites →https://doi.org/10.1111/syen.12357openalex-snapshot
Higher‐level phylogeny and evolutionary history of Pentatomomorpha (Hemiptera: Heteroptera) inferred from mitochondrial genome sequences
inferredcites →https://doi.org/10.1113/eph8802514openalex-snapshot
Replication and Transcription of Mammalian Mitochondrial Dna
inferredcites →https://doi.org/10.1145/2016741.2016785openalex-snapshot
The CIPRES science gateway
inferredcites →https://doi.org/10.1146/annurev-ento-011613-162007openalex-snapshot
Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny
inferredcites →https://doi.org/10.1146/annurev.cb.07.110191.002321openalex-snapshot
Replication and Transcription of Vertebrate Mitochondrial DNA
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.001413openalex-snapshot
EVOLUTION OF ANIMAL MITOCHONDRIAL DNA: RELEVANCE FOR POPULATION BIOLOGY AND SYSTEMATICS
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.002421openalex-snapshot
INTRASPECIFIC PHYLOGEOGRAPHY: The Mitochondrial DNA Bridge Between Population Genetics and Systematics
inferredcites →https://doi.org/10.11646/zootaxa.1991.1.2openalex-snapshot
Combined molecular and morphological phylogeny of Ephemerellinae (Ephemerellidae: Ephemeroptera), with remarks about classification
inferredcites →https://doi.org/10.11646/zootaxa.3065.1.3openalex-snapshot
Contributions to the larvae of North American Nixe (Ephemeroptera: Heptageniidae), with the description of N. dorothae sp. nov. from southern Indiana
inferredcites →https://doi.org/10.11646/zootaxa.4802.2.7openalex-snapshot
Two new species of the genus Notacanthurus from China (Ephemeroptera: Heptageniidae, Ecdyonurinae)
inferredcites →https://doi.org/10.1186/1471-2164-11-447openalex-snapshot
Complete mitochondrial genomes of Taenia multiceps, T. hydatigena and T. pisiformis: additional molecular markers for a tapeworm genus of human and animal health significance
inferredcites →https://doi.org/10.1186/s12864-017-4102-yopenalex-snapshot
Mitochondrial genomes of blister beetles (Coleoptera, Meloidae) and two large intergenic spacers in Hycleus genera
inferredcites →https://doi.org/10.1186/s12864-018-5365-7openalex-snapshot
Comparative analysis of the mitochondrial genomes of oriental spittlebug trible Cosmoscartini: insights into the relationships among closely related taxa
inferredcites →https://doi.org/10.1525/california/9780520098688.003.0016openalex-snapshot
A Molecular Analysis of the Afrotropical Baetidae
inferredcites →https://doi.org/10.1899/04-142.1openalex-snapshot
Biological identifications of mayflies (Ephemeroptera) using DNA barcodes
inferredcites →https://doi.org/10.3109/19401736.2014.926488openalex-snapshot
The complete mitochondrial genome of Paegniodes cupulatus (Ephemeroptera: Heptageniidae)
inferredcites →https://doi.org/10.3390/genes10090724openalex-snapshot
Characterization of the Complete Mitochondrial Genome of Harpalus sinicus and Its Implications for Phylogenetic Analyses
inferredcites →https://doi.org/10.3390/ijms21051874openalex-snapshot
Comparative Analysis of Complete Mitochondrial Genomes of Three Gerres Fishes (Perciformes: Gerreidae) and Primary Exploration of Their Evolution History
inferredcites →https://doi.org/10.3390/insects11040232openalex-snapshot
Complete Mitogenomic Structure and Phylogenetic Implications of the Genus Ostrinia (Lepidoptera: Crambidae)
inferredcites →https://doi.org/10.3752/cjai.2008.07;openalex-snapshot
Heptageniidae of the world, Part II : key of the genera.
inferredcites →https://doi.org/10.3897/asp.76.e31962openalex-snapshot
Integrative taxonomy of genus Electrogena (Ephemeroptera: Heptageniidae): the role of innovative morphological analyses for species delimitation

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Discovery of a new Isonychia species with distinctive characters from southwestern China, and preliminary exploration of its phylogenetic status (Ephemeroptera, Isonychiidae)
inferred← citeshttps://doi.org/10.1002/ece3.72309openalex-snapshot
Exploring the Mitogenomes of Acroneuriinae: The First Report of Gene Rearrangements in Plecoptera Species and Phylogenetic Analyses of Perlidae
inferred← citeshttps://doi.org/10.1002/ece3.72935openalex-snapshot
Mitochondrial Genome Characterization of Six Spiny Crawler Mayflies and Comparative Analysis Within Ephemerellidae (Ephemeroptera: Pannota)
inferred← citeshttps://doi.org/10.1002/ece3.73034openalex-snapshot
Characterization and Phylogenomic Implications of the Mitochondrial Genome of Rhithrogena elasmaris (Ephemeroptera: Heptageniidae)
inferred← citeshttps://doi.org/10.1007/s11033-022-07409-xopenalex-snapshot
Two complete mitochondrial genomes in Scolopendra and a comparative analysis of tRNA rearrangements in centipedes
inferred← citeshttps://doi.org/10.1007/s11033-023-08272-0openalex-snapshot
Characterization of the complete mitochondrial genome of the brazilian cownose ray Rhinoptera brasiliensis (Myliobatiformes, Rhinopteridae) in the western Atlantic and its phylogenetic implications
inferred← citeshttps://doi.org/10.1016/j.dib.2024.111137openalex-snapshot
The complete mitogenome dataset of the heptageniid mayfly Afronurus levis (Ephemeroptera: Heptageniidae: Ecdyonurinae) from South Korea
inferred← citeshttps://doi.org/10.1016/j.gene.2023.147603openalex-snapshot
Novel gene rearrangements in mitochondrial genomes of four families of praying mantises (Insecta, Mantodea) and phylogenetic relationships of Mantodea
inferred← citeshttps://doi.org/10.1038/s41598-024-52979-4openalex-snapshot
Comparative mitochondrial genome brings insights to slight variation in gene proportion and large intergenic spacer and phylogenetic relationship of mudskipper species
inferred← citeshttps://doi.org/10.1080/23802359.2025.2602240openalex-snapshot
First report of mitochondrial genome of Cloeon viridulum (Ephemeroptera: Baetidae) from Hebei, China
inferred← citeshttps://doi.org/10.3389/fgene.2023.1132606openalex-snapshot
Comparative mitogenomes reveal diverse and novel gene rearrangements in the genus Meteorus (Hymenoptera: Braconidae)
inferred← citeshttps://doi.org/10.3389/fmars.2022.850710openalex-snapshot
Understanding the Evolution of Mitochondrial Genomes in the Green Macroalgal Genus Ulva (Ulvophyceae, Chlorophyta)
inferred← citeshttps://doi.org/10.3390/biology12010135openalex-snapshot
Analysis of the Mitogenomes of Two Helotid Species Provides New Insights into the Phylogenetic Relationship of the Basal Cucujoidea (Insecta: Coleoptera)
inferred← citeshttps://doi.org/10.3390/genes12121875openalex-snapshot
The First Two Complete Mitochondrial Genomes of Neoephemeridae (Ephemeroptera): Comparative Analysis and Phylogenetic Implication for Furcatergalia
inferred← citeshttps://doi.org/10.3390/genes15020254openalex-snapshot
The First Complete Mitochondrial Genome of the Genus Litostrophus: Insights into the Rearrangement and Evolution of Mitochondrial Genomes in Diplopoda
inferred← citeshttps://doi.org/10.3390/genes16050565openalex-snapshot
Comparative Mitochondrial Genomic and Phylogenetic Study of Eight Species of the Family Lonchodidae (Phasmatodea: Euphasmatodea)
inferred← citeshttps://doi.org/10.3390/insects13070564openalex-snapshot
Novel Mitochondrial Gene Rearrangement and Intergenic Regions Exist in the Mitochondrial Genomes from Four Newly Established Families of Praying Mantises (Insecta: Mantodea)
inferred← citeshttps://doi.org/10.3390/insects13070599openalex-snapshot
Comparative Mitogenome Analyses of Subgenera and Species Groups in Epeorus (Ephemeroptera: Heptageniidae)
inferred← citeshttps://doi.org/10.3390/insects13090759openalex-snapshot
Comparative Mitogenomic Analyses of Hydropsychidae Revealing the Novel Rearrangement of Protein-Coding Gene and tRNA (Trichoptera: Annulipalpia)
inferred← citeshttps://doi.org/10.3390/insects13121164openalex-snapshot
Comparative Analysis of Mitogenomes of Chironomus (Diptera: Chironomidae)
inferred← citeshttps://doi.org/10.3390/insects15100745openalex-snapshot
Mitogenome-Based Phylogeny with Divergence Time Estimates Revealed the Presence of Cryptic Species within Heptageniidae (Insecta, Ephemeroptera)
inferred← citeshttps://doi.org/10.3390/insects17070718openalex-snapshot
Comparative Mitogenomics Reveals Gene Rearrangement and Phylogenetic Relationships in Siphlonuroidea (Insecta: Ephemeroptera)
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