On the public citation graph
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
0 signed · 105 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/ece3.4387openalex-snapshot
Toward an ecoregion scale evaluation of eDNA metabarcoding primers: A case study for the freshwater fish biodiversity of the Murray–Darling Basin (Australia)
inferredcites →https://doi.org/10.1002/ece3.6279openalex-snapshot
Effects of sampling seasons and locations on fish environmental DNA metabarcoding in dam reservoirs
inferredcites →https://doi.org/10.1002/ece3.7658openalex-snapshot
Environmental DNA metabarcoding primers for freshwater fish detection and quantification: In silico and in tanks
inferredcites →https://doi.org/10.1002/edn3.200openalex-snapshot
Monitoring vertebrate biodiversity of a protected coastal wetland using eDNA metabarcoding
inferredcites →https://doi.org/10.1007/s00114-017-1521-1openalex-snapshot
Identifying a breeding habitat of a critically endangered fish, Acheilognathus typus, in a natural river in Japan
inferredcites →https://doi.org/10.1007/s00414-006-0113-yopenalex-snapshot
Two universal primer sets for species identification among vertebrates
inferredcites →https://doi.org/10.1007/s10201-016-0508-5openalex-snapshot
A simple method for preserving environmental DNA in water samples at ambient temperature by addition of cationic surfactant
inferredcites →https://doi.org/10.1007/s10530-016-1203-5openalex-snapshot
Improving the containment of a freshwater invader using environmental DNA (eDNA) based monitoring
inferredcites →https://doi.org/10.1007/s12562-020-01461-xopenalex-snapshot
MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples
inferredcites →https://doi.org/10.1007/s12686-016-0550-yopenalex-snapshot
Freshwater vertebrate metabarcoding on Illumina platforms using double-indexed primers of the mitochondrial 16S rRNA gene
inferredcites →https://doi.org/10.1016/j.biocon.2014.11.025openalex-snapshot
Characterizing the distribution of an endangered salmonid using environmental DNA analysis
inferredcites →https://doi.org/10.1016/j.biocon.2014.11.038openalex-snapshot
Quantifying effects of UV-B, temperature, and pH on eDNA degradation in aquatic microcosms
inferredcites →https://doi.org/10.1016/j.biocon.2016.03.010openalex-snapshot
Comparison of environmental DNA metabarcoding and conventional fish survey methods in a river system
inferredcites →https://doi.org/10.1016/j.biocon.2017.09.015openalex-snapshot
Environmental DNA characterization of amphibian communities in the Brazilian Atlantic forest: Potential application for conservation of a rich and threatened fauna
inferredcites →https://doi.org/10.1016/j.scitotenv.2018.02.295openalex-snapshot
Degradation and dispersion limit environmental DNA detection of rare amphibians in wetlands: Increasing efficacy of sampling designs
inferredcites →https://doi.org/10.1016/j.ympev.2005.11.021openalex-snapshot
Complete nucleotide sequence of the mitochondrial genome of a Malagasy poison frog Mantella madagascariensis: Evolutionary implications on mitochondrial genomes of higher anuran groups
inferredcites →https://doi.org/10.1016/j.ympev.2011.01.015openalex-snapshot
Mitochondrial DNA diversification, molecular phylogeny, and biogeography of the primitive rhacophorid genus Buergeria in East Asia
inferredcites →https://doi.org/10.1016/j.ympev.2012.10.015openalex-snapshot
Phylogeny and historical demography of Cynops pyrrhogaster (Amphibia: Urodela): Taxonomic relationships and distributional changes associated with climatic oscillations
inferredcites →https://doi.org/10.1017/s1464793105006950openalex-snapshot
Freshwater biodiversity: importance, threats, status and conservation challenges
inferredcites →https://doi.org/10.1038/nature10650openalex-snapshot
Additive threats from pathogens, climate and land-use change for global amphibian diversity
inferredcites →https://doi.org/10.1038/srep40368openalex-snapshot
Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea
inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot
Search and clustering orders of magnitude faster than BLAST
inferredcites →https://doi.org/10.1093/cz/zoab094openalex-snapshot
Development of an eDNA metabarcoding tool for surveying the world’s largest amphibian
inferredcites →https://doi.org/10.1093/molbev/msn031openalex-snapshot
Phylogeny, Recombination, and Mechanisms of Stepwise Mitochondrial Genome Reorganization in Mantellid Frogs from Madagascar
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/nar/gkq742openalex-snapshot
Natural and engineered nicking endonucleases--from cleavage mechanism to engineering of strand-specificity
inferredcites →https://doi.org/10.1093/nar/gkr732openalex-snapshot
ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis
inferredcites →https://doi.org/10.1093/nar/gks596openalex-snapshot
Primer3—new capabilities and interfaces
inferredcites →https://doi.org/10.1098/rsos.150088openalex-snapshot
MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species
inferredcites →https://doi.org/10.1098/rspb.2002.2218openalex-snapshot
Biological identifications through DNA barcodes
inferredcites →https://doi.org/10.1111/1365-2656.13468openalex-snapshot
Validating eDNA measurements of the richness and abundance of anurans at a large scale
inferredcites →https://doi.org/10.1111/1365-2664.12392openalex-snapshot
A basin‐scale application of environmental DNA assessment for rare endemic species and closely related exotic species in rivers: a case study of giant salamanders in Japan
inferredcites →https://doi.org/10.1111/1755-0998.12159openalex-snapshot
Factors influencing detection of eDNA from a stream‐dwelling amphibian
inferredcites →https://doi.org/10.1111/1755-0998.12433openalex-snapshot
Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding
inferredcites →https://doi.org/10.1111/1755-0998.12643openalex-snapshot
eDNA metabarcoding: a promising method for anuran surveys in highly diverse tropical forests
inferredcites →https://doi.org/10.1111/1755-0998.12685openalex-snapshot
Rapid degradation of longer DNA fragments enables the improved estimation of distribution and biomass using environmental DNA
inferredcites →https://doi.org/10.1111/1755-0998.12690openalex-snapshot
Environmental DNA enables detection of terrestrial mammals from forest pond water
inferredcites →https://doi.org/10.1111/1755-0998.12934openalex-snapshot
Accuracy, limitations and cost efficiency of eDNA‐based community survey in tropical frogs
inferredcites →https://doi.org/10.1111/1755-0998.13200openalex-snapshot
Quantitative evaluation of intraspecific genetic diversity in a natural fish population using environmental DNA analysis
inferredcites →https://doi.org/10.1111/2041-210x.12595openalex-snapshot
Critical considerations for the application of environmental DNA methods to detect aquatic species
inferredcites →https://doi.org/10.1111/2041-210x.12743openalex-snapshot
Dealing with false‐positive and false‐negative errors about species occurrence at multiple levels
inferredcites →https://doi.org/10.1111/2041-210x.12849openalex-snapshot
Scrutinizing key steps for reliable metabarcoding of environmental samples
inferredcites →https://doi.org/10.1111/2041-210x.13276openalex-snapshot
Non‐specific amplification compromises environmental DNA metabarcoding with COI
inferredcites →https://doi.org/10.1111/2041-210x.13485openalex-snapshot
A comprehensive and comparative evaluation of primers for metabarcoding eDNA from fish
inferredcites →https://doi.org/10.1111/cobi.13183openalex-snapshot
Combined use of eDNA metabarcoding and video surveillance for the assessment of fish biodiversity
inferredcites →https://doi.org/10.1111/fwb.13800openalex-snapshot
Environmental DNA metabarcoding elucidates patterns of fish colonisation and co‐occurrences with amphibians in temperate wetlands created for biodiversity
inferredcites →https://doi.org/10.1111/j.1755-263x.2010.00158.xopenalex-snapshot
“Sight‐unseen” detection of rare aquatic species using environmental DNA
inferredcites →https://doi.org/10.1111/mec.13428openalex-snapshot
Next‐generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
inferredcites →https://doi.org/10.1111/mec.14350openalex-snapshot
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
inferredcites →https://doi.org/10.1111/mec.15742openalex-snapshot
Monitoring of spatiotemporal occupancy patterns of fish and amphibian species in a lentic aquatic system using environmental DNA
inferredcites →https://doi.org/10.1126/science.1103538openalex-snapshot
Status and Trends of Amphibian Declines and Extinctions Worldwide
inferredcites →https://doi.org/10.1126/science.1187512openalex-snapshot
Global Biodiversity: Indicators of Recent Declines
inferredcites →https://doi.org/10.1126/science.abd3369openalex-snapshot
Human impacts on global freshwater fish biodiversity
inferredcites →https://doi.org/10.1139/cjfas-2013-0047openalex-snapshot
Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples
inferredcites →https://doi.org/10.1139/gen-2016-0100openalex-snapshot
The importance of molecular markers and primer design when characterizing biodiversity from environmental DNA
inferredcites →https://doi.org/10.1146/annurev-marine-041421-082251openalex-snapshot
Environmental DNA Metabarcoding: A Novel Method for Biodiversity Monitoring of Marine Fish Communities
inferredcites →https://doi.org/10.1163/157075405774483139openalex-snapshot
Amphibian Research and Monitoring Initiative (ARMI): A successful start to a national program in the United States
inferredcites →https://doi.org/10.11646/zootaxa.3636.1.10openalex-snapshot
KUNIO SEKIYA, IKUO MIURA & MITSUAKI OGATA (2012) A new frog species of the genus Rugosa from Sado Island, Japan (Anura, Ranidae). Zootaxa, 3575, 49–62.
inferredcites →https://doi.org/10.1186/1471-2164-14-633openalex-snapshot
Afrobatrachian mitochondrial genomes: genome reorganization, gene rearrangement mechanisms, and evolutionary trends of duplicated and rearranged genes
inferredcites →https://doi.org/10.1186/1742-9994-2-1openalex-snapshot
Linking biogeography to physiology: Evolutionary and acclimatory adjustments of thermal limits
inferredcites →https://doi.org/10.1186/1742-9994-2-5openalex-snapshot
Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians
inferredcites →https://doi.org/10.1371/journal.pone.0035868openalex-snapshot
Estimation of Fish Biomass Using Environmental DNA
inferredcites →https://doi.org/10.1371/journal.pone.0076910openalex-snapshot
Two New Computational Methods for Universal DNA Barcoding: A Benchmark Using Barcode Sequences of Bacteria, Archaea, Animals, Fungi, and Land Plants
inferredcites →https://doi.org/10.1371/journal.pone.0191737openalex-snapshot
Seasonal variation in environmental DNA detection in sediment and water samples
inferredcites →https://doi.org/10.1371/journal.pone.0222493openalex-snapshot
Development of a quantitative polymerase chain reaction assay and environmental DNA sampling methods for Giant Gartersnake (Thamnophis gigas)
inferredcites →https://doi.org/10.18637/jss.v067.i01openalex-snapshot
Fitting Linear Mixed-Effects Models Using lme4
inferredcites →https://doi.org/10.2108/zs190007openalex-snapshot
A Phylogenetically Distinct Group of Glandirana rugosa Found in Kyushu, Japan
inferredcites →https://doi.org/10.3105/018.028.0101openalex-snapshot
PCR Primers for the Neobatrachian Mitochondrial Genome
inferredcites →https://doi.org/10.3390/d13090440openalex-snapshot
Application of eDNA Metabarcoding for Detecting Anura on a Tropical Island
inferredcites →https://doi.org/10.3791/61825openalex-snapshot
Development and Testing of Species-specific Quantitative PCR Assays for Environmental DNA Applications
inferredcites →https://doi.org/10.7717/peerj.12357openalex-snapshot
Monitoring newt communities in urban area using eDNA metabarcoding
inferredcites →https://doi.org/10.7717/peerj.7335openalex-snapshot
The effects of spatial and temporal replicate sampling on eDNA metabarcoding
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← backgroundhttps://doi.org/10.3897/mbmg.6.76534.suppl1zenodo-depositor-declared
Supplementary material 1 from: Sakata MK, Kawata MU, Kurabayashi A, Kurita T, Nakamura M, Shirako T, Kakehashi R, Nishikawa K, Hossman MY, Nishijima T, Kabamoto J, Miya M, Minamoto T (2022) Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia.…
inferred← citeshttps://doi.org/10.1002/aqc.70174openalex-snapshot
A Degenerate Primer Set for eDNA Metabarcoding of Freshwater Amphibians, Turtles and Fish
inferred← citeshttps://doi.org/10.1002/aqc.70437openalex-snapshot
Optimising the Detection of Southern Toadlets ( Pseudophryne semimarmorata ): A Comparative Study of eDNA and Conventional Survey Methods
inferred← citeshttps://doi.org/10.1002/edn3.399openalex-snapshot
Monitoring the birds and the bees: Environmental DNA metabarcoding of flowers detects plant–animal interactions
inferred← citeshttps://doi.org/10.1002/edn3.588openalex-snapshot
Environmental DNA metabarcoding on aquatic insects: Comparing the primer sets of MtInsects‐16S based on the mtDNA 16S and general marker based on the mtDNA COI region
inferred← citeshttps://doi.org/10.1007/s10201-022-00710-5openalex-snapshot
Development of novel PCR primer sets for DNA barcoding of aquatic insects, and the discovery of some cryptic species
inferred← citeshttps://doi.org/10.1007/s10531-026-03280-5openalex-snapshot
Feasibility of an eDNA-based educational programme for high school students
inferred← citeshttps://doi.org/10.1007/s11252-026-02090-5openalex-snapshot
Anurans in culturally managed temple and shrine waterscapes in Kyoto: integrated visual, acoustic, and environmental DNA surveys
inferred← citeshttps://doi.org/10.1016/j.ab.2024.115618openalex-snapshot
Experimental study on the detection of Gastrodia elata by enzymatic recombinase amplification and immunochromatography
inferred← citeshttps://doi.org/10.1016/j.biocon.2024.110472openalex-snapshot
Public attention towards declining global amphibian species
inferred← citeshttps://doi.org/10.1016/j.cacint.2023.100101openalex-snapshot
Heterogeneous preference for biodiversity in Japanese urban blue spaces based on people's nature experiences: Analysis using eDNA and satisfaction data
inferred← citeshttps://doi.org/10.1016/j.ecolind.2025.113459openalex-snapshot
Application of eDNA metabarcoding to assess spatial distribution and habitat use by freshwater fish in a peri-alpine lake
inferred← citeshttps://doi.org/10.1016/j.gecco.2025.e04011openalex-snapshot
Amphibian diversity and distribution patterns in Chaohu Lake basin based on environmental DNA and traditional line transect method
inferred← citeshttps://doi.org/10.1016/j.marenvres.2025.107094openalex-snapshot
Development of universal PCR primers for the environmental DNA metabarcoding of cephalopod (Mollusca) diversity
inferred← citeshttps://doi.org/10.1039/9781837672004-00006openalex-snapshot
Considerations of Amphibian Models and Testing Paradigms for Ecological Risk Assessment
inferred← citeshttps://doi.org/10.1093/dnares/dsac018openalex-snapshot
Environmental DNA analysis for macro-organisms: species distribution and more
inferred← citeshttps://doi.org/10.1101/2022.08.02.502273openalex-snapshot
Seasonal eDNA-based monitoring of Batrachochytrium dendrobatidis and amphibian species in Norway
inferred← citeshttps://doi.org/10.1101/2023.06.29.547017openalex-snapshot
Definitive environmental DNA research on aquatic insects: Analysis optimization using the recently developed MtInsects-16S primers set
inferred← citeshttps://doi.org/10.1101/2025.09.02.672770openalex-snapshot
Feasibility of an eDNA-based educational program for high school students
inferred← citeshttps://doi.org/10.1111/1749-4877.12832openalex-snapshot
Validation and development of eDNA metabarcoding primers for comprehensive assessment of Chinese amphibians
inferred← citeshttps://doi.org/10.1111/1755-0998.13931openalex-snapshot
Enhancing amphibian biomonitoring through eDNA metabarcoding
inferred← citeshttps://doi.org/10.1111/1755-0998.14082openalex-snapshot
Navigating Methodological Trade‐Offs in eDNA Metabarcoding Biodiversity Monitoring: Insights From a Mediterranean Watershed
inferred← citeshttps://doi.org/10.1111/1755-0998.70122openalex-snapshot
A Field‐Deployable eDNA Metabarcoding Workflow Including De Novo Reference Assembly for Characterising Understudied Biodiversity Hotspots
inferred← citeshttps://doi.org/10.1111/ens.12616openalex-snapshot
Environmental DNA metabarcoding for insect biodiversity surveys: Current status and future prospects for potential applications in highly diverse insect taxa
inferred← citeshttps://doi.org/10.11606/t.11.2022.tde-24022023-121205openalex-snapshot
IInfluence of cropping systems on insect predators diversity and their trophic relationships
inferred← citeshttps://doi.org/10.1371/journal.pone.0290836openalex-snapshot
From roads to biobanks: Roadkill animals as a valuable source of genetic data
inferred← citeshttps://doi.org/10.18307/2025.0409openalex-snapshot
Research and application progress of environmental DNA technology in amphibian monitoring
inferred← citeshttps://doi.org/10.20944/preprints202312.1366.v1openalex-snapshot
Anura (Class Amphibia) Diversity Based on Environmental DNA (eDNA) in the Paddy Field Water Environment
inferred← citeshttps://doi.org/10.2108/zs250005openalex-snapshot
Fecal DNA Metabarcoding Analyses Imply Seasonally Opportunistic Feeding by the Japanese Marten, Martes melampus (Mammalia: Carnivora), in Southwestern Honshu Island, Japan
inferred← citeshttps://doi.org/10.21638/spbu03.2024.407openalex-snapshot
Aquatic environmental DNA: Applications for assessment and monitoring vertebrate
inferred← citeshttps://doi.org/10.3106/ms2024-0018openalex-snapshot
Diets of Rodents Revealed through DNA Metabarcoding
inferred← citeshttps://doi.org/10.3390/w16213063openalex-snapshot
Can eDNA Present in Aquatic Environments of Rural Areas Help Identify Species Diversity in the Order Anura?
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.