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Observing Life in the Sea Using Environmental DNA
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/2015gl063306openalex-snapshot
Causes and impacts of the 2014 warm anomaly in the NE Pacific
inferredcites →https://doi.org/10.1002/2017gl072637openalex-snapshot
Causality of an extreme harmful algal bloom in Monterey Bay, California, during the 2014–2016 northeast Pacific warm anomaly
inferredcites →https://doi.org/10.1002/2017gl074322openalex-snapshot
Nutrient supply, surface currents, and plankton dynamics predict zooplankton hotspots in coastal upwelling systems
inferredcites →https://doi.org/10.1016/j.biocon.2014.11.019openalex-snapshot
Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity
inferredcites →https://doi.org/10.1016/j.dsr.2010.12.008openalex-snapshot
Particle size distributions in the upper 100 m water column and their implications for animal feeding in the plankton
inferredcites →https://doi.org/10.1016/j.hal.2018.08.006openalex-snapshot
Diversity and toxicity of Pseudo-nitzschia species in Monterey Bay: Perspectives from targeted and adaptive sampling
inferredcites →https://doi.org/10.1016/j.pocean.2008.10.022openalex-snapshot
Revisiting Peruvian anchovy (Engraulis ringens) trophodynamics provides a new vision of the Humboldt Current system
inferredcites →https://doi.org/10.1016/j.tree.2014.04.003openalex-snapshot
Environmental DNA for wildlife biology and biodiversity monitoring
inferredcites →https://doi.org/10.1016/s0967-0645(03)00130-9openalex-snapshot
Interannual variability in copepod community composition at a coastal station in the northern California Current: a multivariate approach
inferredcites →https://doi.org/10.1038/47481openalex-snapshot
Mortality of sea lions along the central California coast linked to a toxic diatom bloom
inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot
DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/s41467-019-14105-1openalex-snapshot
Environmental DNA reveals seasonal shifts and potential interactions in a marine community
inferredcites →https://doi.org/10.1038/s41467-019-14215-wopenalex-snapshot
Habitat compression and ecosystem shifts as potential links between marine heatwave and record whale entanglements
inferredcites →https://doi.org/10.1038/s41598-017-12501-5openalex-snapshot
Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment
inferredcites →https://doi.org/10.1038/s41598-017-17333-xopenalex-snapshot
Estimating and mitigating amplification bias in qualitative and quantitative arthropod metabarcoding
inferredcites →https://doi.org/10.1038/s41598-021-93859-5openalex-snapshot
Environmental DNA reveals the fine-grained and hierarchical spatial structure of kelp forest fish communities
inferredcites →https://doi.org/10.1038/s42003-020-01282-9openalex-snapshot
Sedimentary DNA tracks decadal-centennial changes in fish abundance
inferredcites →https://doi.org/10.1080/14634988.2019.1682912openalex-snapshot
How to learn to stop worrying and love environmental DNA monitoring
inferredcites →https://doi.org/10.1098/rsos.150088openalex-snapshot
MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species
inferredcites →https://doi.org/10.1111/1462-2920.13023openalex-snapshot
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
inferredcites →https://doi.org/10.1111/1755-0998.12928openalex-snapshot
Capture enrichment of aquatic environmental DNA: A first proof of concept
inferredcites →https://doi.org/10.1111/1755-0998.13293openalex-snapshot
Genome‐scale target capture of mitochondrial and nuclear environmental DNA from water samples
inferredcites →https://doi.org/10.1111/1755-0998.13485openalex-snapshot
Towards reproducible metabarcoding data: Lessons from an international cross‐laboratory experiment
inferredcites →https://doi.org/10.1111/2041-210x.13201openalex-snapshot
A rapid environmental DNA method for detecting white sharks in the open ocean
inferredcites →https://doi.org/10.1111/ddi.13228openalex-snapshot
Large‐scale eDNA metabarcoding survey reveals marine biogeographic break and transitions over tropical north‐western Australia
inferredcites →https://doi.org/10.1111/mec.13481openalex-snapshot
Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA
inferredcites →https://doi.org/10.1111/mec.14350openalex-snapshot
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
inferredcites →https://doi.org/10.1111/mec.15543openalex-snapshot
The relationship between eDNA particle concentration and organism abundance in nature is strengthened by allometric scaling
inferredcites →https://doi.org/10.1111/mec.15592openalex-snapshot
Biases in bulk: DNA metabarcoding of marine communities and the methodology involved
inferredcites →https://doi.org/10.1111/mec.15643openalex-snapshot
Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring
inferredcites →https://doi.org/10.1111/mec.15942openalex-snapshot
Trade‐offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on “Environmental DNA: What's behind the term?” by Pawlowski et al., (2020)
inferredcites →https://doi.org/10.1126/science.1075880openalex-snapshot
From Anchovies to Sardines and Back: Multidecadal Change in the Pacific Ocean
inferredcites →https://doi.org/10.1126/science.166.3901.72openalex-snapshot
Photosynthesis and Fish Production in the Sea
inferredcites →https://doi.org/10.1126/science.167.3921.1119openalex-snapshot
Spectra of Backscattered Light from the Sea Obtained from Aircraft as a Measure of Chlorophyll Concentration
inferredcites →https://doi.org/10.1128/msystems.00016-19openalex-snapshot
A Novel Sparse Compositional Technique Reveals Microbial Perturbations
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110617-062306openalex-snapshot
Uses and Misuses of Environmental DNA in Biodiversity Science and Conservation
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2105-12-38openalex-snapshot
Removing Noise From Pyrosequenced Amplicons
inferredcites →https://doi.org/10.1186/1742-9994-10-34openalex-snapshot
A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
inferredcites →https://doi.org/10.1371/journal.pcbi.1004957openalex-snapshot
MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
inferredcites →https://doi.org/10.1371/journal.pone.0006372openalex-snapshot
A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
inferredcites →https://doi.org/10.1371/journal.pone.0029715openalex-snapshot
Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
inferredcites →https://doi.org/10.1371/journal.pone.0041732openalex-snapshot
Detection of a Diverse Marine Fish Fauna Using Environmental DNA from Seawater Samples
inferredcites →https://doi.org/10.1371/journal.pone.0086175openalex-snapshot
Using Environmental DNA to Census Marine Fishes in a Large Mesocosm
inferredcites →https://doi.org/10.1371/journal.pone.0148698openalex-snapshot
Indexed PCR Primers Induce Template-Specific Bias in Large-Scale DNA Sequencing Studies
inferredcites →https://doi.org/10.1371/journal.pone.0224119openalex-snapshot
Validating metabarcoding-based biodiversity assessments with multi-species occupancy models: A case study using coastal marine eDNA
inferredcites →https://doi.org/10.1371/journal.pone.0235159openalex-snapshot
Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding
inferredcites →https://doi.org/10.15468/84nteaopenalex-snapshot
18S Monterey Bay Time Series: an eDNA data set from Monterey Bay, California, including years 2006, 2013 - 2016
inferredcites →https://doi.org/10.2307/1942268openalex-snapshot
An Ordination of the Upland Forest Communities of Southern Wisconsin
inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot
vegan: Community Ecology Package
inferredcites →https://doi.org/10.3354/ame017099openalex-snapshot
Feeding by the small calanoid copepod Paracalanus sp. on heterotrophic dinoflagellates and ciliates
inferredcites →https://doi.org/10.3354/meps084293openalex-snapshot
Autecology of the diatom Pseudonitzschia australis, a domoic acid producer, from Monterey Bay, California
inferredcites →https://doi.org/10.3389/fmars.2017.00107openalex-snapshot
DNA Sequencing as a Tool to Monitor Marine Ecological Status
inferredcites →https://doi.org/10.3389/fmars.2019.00373openalex-snapshot
In situ Autonomous Acquisition and Preservation of Marine Environmental DNA Using an Autonomous Underwater Vehicle
inferredcites →https://doi.org/10.3389/fmars.2019.00621openalex-snapshot
Linking Environmental DNA and RNA for Improved Detection of the Marine Invasive Fanworm Sabella spallanzanii
inferredcites →https://doi.org/10.3389/fmars.2019.00629openalex-snapshot
The Enduring Questions: What's for Dinner? Where's My Knife? …and Can I Use My Fingers? (Unanswered) Questions Related to Organic Matter and Microbes in Marine Sediments
inferredcites →https://doi.org/10.3389/fmars.2019.00732openalex-snapshot
Marine Vertebrate Biodiversity and Distribution Within the Central California Current Using Environmental DNA (eDNA) Metabarcoding and Ecosystem Surveys
inferredcites →https://doi.org/10.3389/fmars.2021.758694openalex-snapshot
Toward a Global Public Repository of Community Protocols to Encourage Best Practices in Biomolecular Ocean Observing and Research
inferredcites →https://doi.org/10.3389/fmicb.2014.00660openalex-snapshot
Biogeographic patterns of bacterial microdiversity in Arctic deep-sea sediments (HAUSGARTEN, Fram Strait)
inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot
Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)
inferredcites →https://doi.org/10.5670/oceanog.2017.427openalex-snapshot
The Quest to Develop Ecogenomic Sensors: A 25-Year History of the Environmental Sample Processor (ESP) as a Case Study
inferredcites →https://doi.org/10.5670/oceanog.2017.429openalex-snapshot
Climate Variability and Change: Response of a Coastal Ocean Ecosystem
inferredcites →https://doi.org/10.5670/oceanog.2021.220openalex-snapshot
Data Management and Interactive Visualizations for the Evolving Marine Biodiversity Observation Network
inferredcites →https://doi.org/10.7717/peerj.3720openalex-snapshot
Atropos: specific, sensitive, and speedy trimming of sequencing reads
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/mbmg.8.128689zenodo-depositor-declared
The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data
inferred← citeshttps://doi.org/10.3897/mbmg.9.132076zenodo-depositor-declared
What is eDNA method standardisation and why do we need it?
inferred← citeshttps://doi.org/10.1002/ece3.70919openalex-snapshot
DNA State Influences the Uptake and Persistence of Environmental DNA by Marine Sponge Natural Samplers
inferred← citeshttps://doi.org/10.1002/edn3.299openalex-snapshot
Expanding the temporal and spatial scales of environmental DNA research with autonomous sampling
inferred← citeshttps://doi.org/10.1002/edn3.452openalex-snapshot
Eight years of weekly eDNA monitoring in the North‐Western Pacific
inferred← citeshttps://doi.org/10.1002/edn3.455openalex-snapshot
Differential ecological adaptation of diverse Chaetoceros species revealed by metabarcoding analysis
inferred← citeshttps://doi.org/10.1002/edn3.468openalex-snapshot
Autonomous eDNA collection using an uncrewed surface vessel over a 4200‐km transect of the eastern Pacific Ocean
inferred← citeshttps://doi.org/10.1002/edn3.70138openalex-snapshot
Environmental DNA Documents Ecosystem‐Wide Biodiversity Within the Marine Protected Area Stellwagen Bank National Marine Sanctuary
inferred← citeshttps://doi.org/10.1002/lno.70110openalex-snapshot
The essential role of large research vessels in marine ecosystem observations and ocean sustainability
inferred← citeshttps://doi.org/10.1007/978-3-031-92737-9_9openalex-snapshot
The Role of Rapid Environmental Assessment in Monitoring the Environmental Impacts of Deep-Sea Mining
inferred← citeshttps://doi.org/10.1016/b978-0-323-95227-9.00026-9openalex-snapshot
Observing and monitoring the ocean
inferred← citeshttps://doi.org/10.1016/j.dsr2.2026.105606openalex-snapshot
Spatiotemporal variability from physics to plankton ecology in an upwelling bay
inferred← citeshttps://doi.org/10.1016/j.eng.2023.10.012openalex-snapshot
New Technologies for Monitoring and Upscaling Marine Ecosystem Restoration in Deep-Sea Environments
inferred← citeshttps://doi.org/10.1016/j.hal.2023.102435openalex-snapshot
A cross-regional examination of patterns and environmental drivers of Pseudo-nitzschia harmful algal blooms along the California coast
inferred← citeshttps://doi.org/10.1016/j.marenvres.2023.106312openalex-snapshot
Plankton assessment across the distribution of West African hake and tuna based on eDNA metabarcoding
inferred← citeshttps://doi.org/10.1016/j.sbsr.2026.101058openalex-snapshot
Development of a lightweight, fully integrated qPCR sensor for environmental DNA
inferred← citeshttps://doi.org/10.1038/s41598-022-19939-2openalex-snapshot
FathomNet: A global image database for enabling artificial intelligence in the ocean
inferred← citeshttps://doi.org/10.1109/joe.2024.3408889openalex-snapshot
Coordinated and Collaborative Sampling by Two Long-Range Autonomous Underwater Vehicles
inferred← citeshttps://doi.org/10.1111/con4.70042openalex-snapshot
From Data to Decision: Leveraging Essential Variables in Standardizing Biodiversity and Ecosystem Services Monitoring and Reporting
inferred← citeshttps://doi.org/10.1111/mec.70411openalex-snapshot
Eukaryotic Biodiversity and Ecological Networks From the Surface to the Mesopelagic in the Northwest Atlantic Slope Water
inferred← citeshttps://doi.org/10.1525/elementa.2024.00098openalex-snapshot
Status of ocean observations in the Indian Sector of the Southern Ocean
inferred← citeshttps://doi.org/10.2139/ssrn.6578356openalex-snapshot
Development of a Lightweight, Fully Integrated Submersible qPCR Sensor for Environmental DNA
inferred← citeshttps://doi.org/10.3389/fmars.2022.929436openalex-snapshot
Recommendations for Plankton Measurements on OceanSITES Moorings With Relevance to Other Observing Sites
inferred← citeshttps://doi.org/10.3389/fmars.2025.1656531openalex-snapshot
Different structuring factors and distribution patterns of marine prokaryotic and eukaryotic communities in the subtropical Kuroshio region
inferred← citeshttps://doi.org/10.3390/d17070495openalex-snapshot
Building a DNA Reference for Madagascar’s Marine Fishes: Expanding the COI Barcode Library and Establishing the First 12S Dataset for eDNA Monitoring
inferred← citeshttps://doi.org/10.3390/life13010192openalex-snapshot
Biodiversity and Interannual Variation of Harmful Algal Bloom Species in the Coastal Sea of Qinhuangdao, China
inferred← citeshttps://doi.org/10.5670/oceanog.2021.215openalex-snapshot
Satellite Remote Sensing and the Marine Biodiversity Observation Network: Current Science and Future Steps
inferred← citeshttps://doi.org/10.5670/oceanog.2021.220openalex-snapshot
Data Management and Interactive Visualizations for the Evolving Marine Biodiversity Observation Network
inferred← citeshttps://doi.org/10.5670/oceanog.2021.221openalex-snapshot
Integrating Biodiversity and Environmental Observations in Support of National Marine Sanctuary and Large Marine Ecosystem Assessments
inferred← citeshttps://doi.org/10.5670/oceanog.2023.s1.28openalex-snapshot
Detecting Mediterranean White Sharks with Environmental DNA
inferred← citeshttps://doi.org/10.6027/temanord2023-517openalex-snapshot
Perspectives on implementation of eDNA methods in Northeast Atlantic marine monitoring
inferred← citeshttps://doi.org/10.7717/peerj.14071openalex-snapshot
A manager’s guide to using eDNA metabarcoding in marine ecosystems
inferred← citeshttps://doi.org/10.7717/peerj.15360openalex-snapshot
An aquatic environmental DNA filtration system to maximize recovery potential and promote filtration approach standardization
inferred← citeshttps://doi.org/10.7930/nca5.2023.ch10openalex-snapshot
Chapter 10 : Ocean Ecosystems and Marine Resources. Fifth National Climate Assessment
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