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Comparative systematics and phylogeography of Quercus Section Cerris in western Eurasia: inferences from plastid and nuclear DNA variation

https://doi.org/10.7717/peerj.5793
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Birch Family: Betulaceae
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An Updated Infrageneric Classification of the Oaks: Review of Previous Taxonomic Schemes and Synthesis of Evolutionary Patterns
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A Time and a Place for Everything
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A unique A. palustris lineage across the Otranto strait: botanical evidence for a past land-bridge?
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Genotypic analysis and population structure of Lebanon oak (Quercus libani G. Olivier) with molecular markers
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Phylogeographic structuring of plastome diversity in Mediterranean oaks (Quercus Group Ilex, Fagaceae)
inferredcites →https://doi.org/10.1007/s11295-017-1130-3openalex-snapshot
A novel set of single-copy nuclear gene markers in white oak and implications for species delimitation
inferredcites →https://doi.org/10.1007/s13595-013-0312-xopenalex-snapshot
Leaf morphology displays no detectable spatial organisation in the relict Quercus afares Pomel compared to the co-occurring parental species Q. canariensis Willd. and Q. suber L
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Phylogeography of the temperate tree species Quercus acutissima in China: Inferences from chloroplast DNA variations
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Geographical genetics and the conservation of forest trees
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Patterns and processes in plant phylogeography in the Mediterranean Basin. A review
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Utility of ITS sequence data for phylogenetic reconstruction of Italian Quercus spp.
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Phylogeny of the Centaurea group (Centaurea, Compositae) – Geography is a better predictor than morphology
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Phylogeny and biogeography of East Asian evergreen oaks (Quercus section Cyclobalanopsis; Fagaceae): Insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia
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Basic Local Alignment Search Tool
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Chloroplast DNA variation of white oaks in Italy
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Endemic North African Quercus afares Pomel originates from hybridisation between two genetically very distant oak species (Q. suber L. and Q. canariensis Willd.): evidence from nuclear and cytoplasmic markers
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Bioclimatic perspectives in the distribution of Quercus ithaburensis Decne. subspecies in Turkey and in the Levant
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Phylogeographical variation of chloroplast DNA in holm oak (Quercus ilex L.)
inferredcites →https://doi.org/10.1046/j.1469-8137.2003.00944.xopenalex-snapshot
Hybridization as a mechanism of invasion in oaks
inferredcites →https://doi.org/10.1080/07352689309701902openalex-snapshot
What Can Molecular and Morphological Markers Tell Us About Plant Hybridization?
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Molecular evidence for hybrid origin of Quercus crenata Lam. (Fagaceae) from Q. cerris L. and Q. suber L.
inferredcites →https://doi.org/10.1080/14772000.2014.941037openalex-snapshot
Multiple nuclear genes stabilize the phylogenetic backbone of the genusQuercus
inferredcites →https://doi.org/10.1086/322949openalex-snapshot
Systematics of Fagaceae: Phylogenetic Tests of Reproductive Trait Evolution
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Taking the Long View: Integrating Recorded, Archeological, Paleoecological, and Evolutionary Data into Ecological Restoration
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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/molbev/msh018openalex-snapshot
Neighbor-Net: An Agglomerative Method for the Construction of Phylogenetic Networks
inferredcites →https://doi.org/10.1093/molbev/msj030openalex-snapshot
Application of Phylogenetic Networks in Evolutionary Studies
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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
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inferredcites →https://doi.org/10.1093/sysbio/syx039openalex-snapshot
Different from Trees, more than Metaphors: Branching Silhouettes—Corals, Cacti, and the Oaks
inferredcites →https://doi.org/10.1093/treephys/tps069openalex-snapshot
The diversification of terpene emissions in Mediterranean oaks: lessons from a study of Quercus suber, Quercus canariensis and its hybrid Quercus afares
inferredcites →https://doi.org/10.1098/rspb.2017.0300openalex-snapshot
A genetic legacy of introgression confounds phylogeny and biogeography in oaks
inferredcites →https://doi.org/10.1098/rstb.2015.0135openalex-snapshot
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inferredcites →https://doi.org/10.1111/boj.12059openalex-snapshot
Application of plastid and nuclear markers to DNA barcoding of Euro-Mediterranean oaks (Quercus, Fagaceae): problems, prospects and phylogenetic implications
inferredcites →https://doi.org/10.1111/j.1096-0031.2007.00177.xopenalex-snapshot
Cladistic analysis of Echinodorus (Alismataceae): simultaneous analysis of molecular and morphological data
inferredcites →https://doi.org/10.1111/j.1365-294x.2007.03587.xopenalex-snapshot
The distribution of Quercus suber chloroplast haplotypes matches the palaeogeographical history of the western Mediterranean
inferredcites →https://doi.org/10.1111/jbi.12673openalex-snapshot
Combining molecular and fossil data to infer demographic history of Quercus cerris: insights on European eastern glacial refugia
inferredcites →https://doi.org/10.1111/mec.13269openalex-snapshot
Phylogeny and biogeography of the American live oaks (QuercussubsectionVirentes): a genomic and population genetics approach
inferredcites →https://doi.org/10.1111/nph.14773openalex-snapshot
Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity
inferredcites →https://doi.org/10.1127/0941-2948/2006/0130openalex-snapshot
World Map of the Köppen-Geiger climate classification updated
inferredcites →https://doi.org/10.1127/metz/2016/0816openalex-snapshot
The climate of the European Alps: Shift of very high resolution Köppen-Geiger climate zones 1800–2100
inferredcites →https://doi.org/10.1139/cjfr-2016-0311openalex-snapshot
Estimating the genetic diversity and structure of Quercus trojana Webb populations in Italy by SSRs: implications for management and conservation
inferredcites →https://doi.org/10.1139/gen-2016-0191openalex-snapshot
A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny
inferredcites →https://doi.org/10.1146/annurev.ecolsys.39.110707.173414openalex-snapshot
Genetic Consequences of Range Expansions
inferredcites →https://doi.org/10.1186/1471-2148-8-86openalex-snapshot
General functions to transform associate data to host data, and their use in phylogenetic inference from sequences with intra-individual variability
inferredcites →https://doi.org/10.1371/journal.pone.0047268openalex-snapshot
Phylogeography of Quercus variabilis Based on Chloroplast DNA Sequence in East Asia: Multiple Glacial Refugia and Mainland-Migrated Island Populations
inferredcites →https://doi.org/10.1371/journal.pone.0093975openalex-snapshot
A Framework Phylogeny of the American Oak Clade Based on Sequenced RAD Data
inferredcites →https://doi.org/10.1515/acpa-2016-0016openalex-snapshot
Cretaceous and Paleogene Fagaceae from North America and Greenland: evidence for a Late Cretaceous split between Fagus and the remaining Fagaceae
inferredcites →https://doi.org/10.1600/0363644053661850openalex-snapshot
Teasing Apart Molecular- Versus Fossil-based Error Estimates when Dating Phylogenetic Trees: A Case Study in the Birch Family (Betulaceae)
inferredcites →https://doi.org/10.1650/condor-15-125.1openalex-snapshot
Scatter-hoarding corvids as seed dispersers for oaks and pines: A review of a widely distributed mutualism and its utility to habitat restoration
inferredcites →https://doi.org/10.2307/1218998openalex-snapshot
THE SPECIES CONCEPT IN QUERCUS
inferredcites →https://doi.org/10.2307/1219444openalex-snapshot
ECOLOGICAL SPECIES, MULTISPECIES, AND OAKS
inferredcites →https://doi.org/10.2307/25065912openalex-snapshot
Multi‐marker phylogeny of three evergreen oaks reveals vicariant patterns in the Western Mediterranean
inferredcites →https://doi.org/10.2307/25066014openalex-snapshot
Molecular phylogenetics and cupule evolution in Fagaceae as inferred from nuclear CRABS CLAW sequences
inferredcites →https://doi.org/10.24310/abm.v27i0.7332openalex-snapshot
Cupule and acorn basic morphological differences between Quercus ithaburensis Decne. subsp. ithaburensis and Quercus ithaburensis subsp. macrolepis (Kotschy) Hedge & Yalt.
inferredcites →https://doi.org/10.3372/wi.36.36214openalex-snapshot
Quercus trojana subsp. yaltirikii (Fagaceae), a new subspecies from southern Turkey
inferredcites →https://doi.org/10.3389/fpls.2017.00816openalex-snapshot
Development of Chloroplast and Nuclear DNA Markers for Chinese Oaks (Quercus Subgenus Quercus) and Assessment of Their Utility as DNA Barcodes
inferredcites →https://doi.org/10.5194/hess-11-1633-2007openalex-snapshot
Updated world map of the Köppen-Geiger climate classification
inferredcites →https://doi.org/10.7717/peerj.1897openalex-snapshot
Plastome data reveal multiple geographic origins of Quercus Group Ilex

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Intraspecific leaf morphometric diversity in the endangered and narrow endemic Quercus trojana subsp. euboica (Fagaceae): a quantitative dataset from three natural populations in Euboea, Greece
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Variations in morphological and epidermal features of shade and sun leaves of two species: Quercus bambusifolia and Q. myrsinifolia
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A Vanishing Imprint? Modeling the Present and Future Distribution of the Enigmatic Quercus crenata Lam., a Mediterranean Sporadic Tree Species
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Diversity of Volatile Emissions From Cork Oak: Quantity and Quality Vary Independently Across Its Range
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Conservation Hotspots of Quercus castaneifolia Revealed Through the Integration of Genetic Diversity and Landscape Connectivity
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The complete chloroplast genomes of three Hamamelidaceae species: Comparative and phylogenetic analyses
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Extensive sharing of chloroplast haplotypes among East Asian Cerris oaks: The imprints of shared ancestral polymorphism and introgression
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Haplotype diversity patterns in Quercus suber (Fagaceae) inferred from cpDNA sequence data
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Dissecting the continuum and unravelling the phylogeographic knot of plastid DNA in European white oaks (Quercus sect. Quercus): ancient signatures and multiple diversity reservoirs
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Genetic and morphological variation in taxonomically critical populations of Quercus petraea s.l. in Southern Europe
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Comparative analysis of the complete chloroplast genomes of six white oaks with high ecological amplitude in China
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Evergreen Oak Woodlands—Southern Europe and Northern Africa
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The role of mesophyll conductance in the estimation of Vcmax and Jmax in four European oaks under moderate drought and warming
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2020.02.201openalex-snapshot
A high level of chloroplast genome sequence variability in the Sawtooth Oak Quercus acutissima
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Strong phylogeographic structure in major plastid lineages of East Asian Cerris oaks (Quercus subsection Campylolepides, Fagaceae): Insights from a 761-plastome analysis
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A new subspecies of Fagus orientalis (Fagaceae) in Turkey: F. orientalis subsp. nurensis, a relict close to the ancestor of modern European and Oriental Beech
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Forecasting impacts of climate and land-use change on Vallonea oak ( Quercus ithaburensis subsp. macrolepis ) based on the ensemble modeling
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Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae)
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Natural selection preserves trans-specific chloroplast diversity in a Mediterranean evergreen oak
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A montane species treeline is defined by both temperature and drought effects on growth season length
inferred← citeshttps://doi.org/10.1101/2025.02.04.636386openalex-snapshot
Chemotype diversity of foliar volatile emissions in Cork oak suggests independent geographic variations in quality and quantity
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Plastid introgression and evolution of African miombo woodlands: New insights from the plastome‐based phylogeny of Brachystegia trees
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5S‐IGS rDNA in wind‐pollinated trees ( Fagus L.) encapsulates 55 million years of reticulate evolution and hybrid origins of modern species
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Complete Chloroplast Genome Sequences of Three Cleomaceae Species in China: Comparative and Phylogenetic Analysis
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Phylogenetic Differentiation and Species Delimitation among Iranian Quercus L. (Fagaceae) Using Nuclear ITS2 and Chloroplast rbcL Barcodes
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alte Wallonen-Eiche von Tricase oder „Die Eiche der hundert Ritter“
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High-Throughput Sequencing of 5S-IGS rDNA in Fagus L. (Fagaceae) reveals complex evolutionary patterns and hybrid origin of modern species
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5S Ribosomal DNA of Distantly Related Quercus Species: Molecular Organization and Taxonomic Application
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Molecular Organization of 5S Ribosomal DNA and Taxonomic Status of Avenella flexuosa (L.) Drejer (Poaceae)
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Landscape Features and Climatic Forces Shape the Genetic Structure and Evolutionary History of an Oak Species (Quercus chenii) in East China
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ddRAD Sequencing-Based Identification of Genomic Boundaries and Permeability in Quercus ilex and Q. suber Hybrids
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5S Ribosomal DNA of Genus Solanum: Molecular Organization, Evolution, and Taxonomy
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Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Quercus bawanglingensis Huang, Li et Xing, a Vulnerable Oak Tree in China
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Genetic Differentiation and Demographic History of Three Cerris Oak Species in China Based on Nuclear Microsatellite Makers
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Interspecific Sharing of Closely Related Chloroplast Genome Haplotypes among Sclerophyllous Oaks in the Hot-Dry Valley of the Jinsha River, Southwestern China
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Genetic Erosion and Fine-Scale Genetic Structure in a Mediterranean Oak: Defining Genetically Informed Conservation Strategies for Quercus trojana in Southern Italy
inferred← citeshttps://doi.org/10.3390/ijpb15040066openalex-snapshot
Morphological and Taxonomic Analysis of the Quercus faginea and Quercus canariensis (Fagaceae) Complexes in Algeria
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Genetic Variability and Admixture Zones in the Italian Populations of Turkey Oak (Quercus cerris L.)
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Complex Scenarios of Reticulation, Polyploidization, and Species Diversity within Annual Pansies of Subsect. Bracteolatae (Viola Sect. Melanium, Violaceae) in Italy: Insights from 5S-IGS High-Throughput Sequencing and Plastid DNA Variation
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Framework Phylogeny, Evolution and Complex Diversification of Chinese Oaks
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Nuclear ribosomal phylogeny of Brachystegia: new markers for new insights about rain forests and Miombo woodlands evolution
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Významné stromy ve venkovské krajině: Sborník z konference
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BIVALVE MOLLUSKS AS INDICATORS OF ENVIRONMENTAL POLLUTION IN THE AMAZON RIVER, BRAZIL
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Organization of the 5s rDNA intergenic spacer of Quercus rubra L. and its relationship to the ukrainian Quercus species
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Organization of 5S rDNA repeated unit of Quercus imbricaria Michx.
inferred← citeshttps://doi.org/10.7124/visnyk.utgis.17.2.1220openalex-snapshot
Molecular structure of 5S rDNA of Mandragora autumnalis Bertol.
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Organization and polymorphysm of 5S rDNA intergenic spacer of blackthorn (Prunus spinosa L.)
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Peer Review #1 of "Phylogenetic relationships in the southern African genus Drosanthemum (Ruschioideae, Aizoaceae) (v0.1)"
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Peer Review #2 of "Phylogenetic relationships in the southern African genus Drosanthemum (Ruschioideae, Aizoaceae) (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.8999v0.1/reviews/3openalex-snapshot
Peer Review #3 of "Phylogenetic relationships in the southern African genus Drosanthemum (Ruschioideae, Aizoaceae) (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.8999v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Phylogenetic relationships in the southern African genus Drosanthemum (Ruschioideae, Aizoaceae) (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.8999v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Phylogenetic relationships in the southern African genus Drosanthemum (Ruschioideae, Aizoaceae) (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.8999v0.2/reviews/3openalex-snapshot
Peer Review #3 of "Phylogenetic relationships in the southern African genus Drosanthemum (Ruschioideae, Aizoaceae) (v0.2)"
inferred← citeshttps://doi.org/10.7717/peerj.8999openalex-snapshot
Towards an economic architecture of the rings of Saturn: On the Political Economy Wave, Kaluza’s fifth dimension and an alternative derivation of the Roche Limit
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.