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A genetic legacy of introgression confounds phylogeny and biogeography in oaks

https://doi.org/10.1098/rspb.2017.0300

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]

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The oaks of western Eurasia: Traditional classifications and evidence from two nuclear markers

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Phylogeny, Biogeography, and Processes of Molecular Differentiation in Quercus Subgenus Quercus (Fagaceae)

inferredcites →https://doi.org/10.1007/bf02101694openalex-snapshot

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

inferredcites →https://doi.org/10.1016/s1387-2656(01)07038-7openalex-snapshot

Genomics and plant breeding

inferredcites →https://doi.org/10.1038/35016640openalex-snapshot

Species status of hybridizing oaks

inferredcites →https://doi.org/10.1038/ng.3199openalex-snapshot

Adaptation and possible ancient interspecies introgression in pigs identified by whole-genome sequencing

inferredcites →https://doi.org/10.1038/sj.hdy.6800782openalex-snapshot

Endemic North African Quercus afares Pomel originates from hybridisation between two genetically very distant oak species (Q. suber L. and Q. canariensis Willd.): evidence from nuclear and cytoplasmic markers

inferredcites →https://doi.org/10.1046/j.1469-8137.2003.00944.xopenalex-snapshot

Hybridization as a mechanism of invasion in oaks

inferredcites →https://doi.org/10.1051/forest:19930709openalex-snapshot

Taxonomical impact of morphological variation in Quercus robur and Q petraea: a contribution to the hybrid controversy

inferredcites →https://doi.org/10.1051/forest:2002065openalex-snapshot

Leaf morphological differentiation between Quercus robur and Quercus petraea is stable across western European mixed oak stands

inferredcites →https://doi.org/10.1073/pnas.0904867106openalex-snapshot

Phylogenetic and trait similarity to a native species predict herbivory on non-native oaks

inferredcites →https://doi.org/10.1073/pnas.1407950111openalex-snapshot

Maximum likelihood inference of reticulate evolutionary histories

inferredcites →https://doi.org/10.1073/pnas.88.6.2540openalex-snapshot

Interspecific gene flow in sympatric oaks.

inferredcites →https://doi.org/10.1080/00222937108696362openalex-snapshot

XXX.—Descriptions of some new or little-known species of oaks from North-west America

inferredcites →https://doi.org/10.1080/10635150290102339openalex-snapshot

Increased Taxon Sampling Greatly Reduces Phylogenetic Error

inferredcites →https://doi.org/10.1080/10635150390132911openalex-snapshot

Is Sparse Taxon Sampling a Problem for Phylogenetic Inference?

inferredcites →https://doi.org/10.1080/10635150701324225openalex-snapshot

Distinguishing Terminal Monophyletic Groups from Reticulate Taxa: Performance of Phenetic, Tree-Based, and Network Procedures

inferredcites →https://doi.org/10.1080/14772000.2014.941037openalex-snapshot

Multiple nuclear genes stabilize the phylogenetic backbone of the genusQuercus

inferredcites →https://doi.org/10.1093/bioinformatics/13.3.235openalex-snapshot

Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btu530openalex-snapshot

Quartet Inference from SNP Data Under the Coalescent Model

inferredcites →https://doi.org/10.1093/genetics/146.4.1475openalex-snapshot

Phylogeographic Structure of White Oaks Throughout the European Continent

inferredcites →https://doi.org/10.1093/molbev/msh137openalex-snapshot

Genome-Scale Phylogeny and the Detection of Systematic Biases

inferredcites →https://doi.org/10.1093/molbev/msj030openalex-snapshot

Application of Phylogenetic Networks in Evolutionary Studies

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026370openalex-snapshot

Phylogenetic Analysis Under Reticulate Evolution

inferredcites →https://doi.org/10.1093/sysbio/syt032openalex-snapshot

Inferring Phylogeny and Introgression using RADseq Data: An Example from Flowering Plants (Pedicularis: Orobanchaceae)

inferredcites →https://doi.org/10.1093/sysbio/syu046openalex-snapshot

Unforeseen Consequences of Excluding Missing Data from Next-Generation Sequences: Simulation Study of RAD Sequences

inferredcites →https://doi.org/10.1093/sysbio/syw030openalex-snapshot

Inconsistency of Species Tree Methods under Gene Flow

inferredcites →https://doi.org/10.1111/evo.12758openalex-snapshot

Historical introgression among the American live oaks and the comparative nature of tests for introgression

inferredcites →https://doi.org/10.1111/j.0014-3820.2004.tb01643.xopenalex-snapshot

SELECTION AND DISPERSAL IN A MULTISPECIES OAK HYBRID ZONE

inferredcites →https://doi.org/10.1111/j.1365-294x.2006.02896.xopenalex-snapshot

COMMENT: Shared alleles in sympatric oaks: recurrent gene flow is a more parsimonious explanation than ancestral polymorphism

inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04632.xopenalex-snapshot

Realized gene flow within mixed stands of Quercus robur L. and Q. petraea (Matt.) L. revealed at the stage of naturally established seedling

inferredcites →https://doi.org/10.1111/j.1438-8677.2009.00244.xopenalex-snapshot

Natural hybridisation between kermes (Quercus coccifera L.) and holm oaks (Q. ilex L.) revealed by microsatellite markers

inferredcites →https://doi.org/10.1111/j.1558-5646.1992.tb01127.xopenalex-snapshot

HYBRIDS AND PHYLOGENETIC SYSTEMATICS II. THE IMPACT OF HYBRIDS ON CLADISTIC ANALYSIS

inferredcites →https://doi.org/10.1111/j.1558-5646.1997.tb03658.xopenalex-snapshot

HOW DISCRETE ARE OAK SPECIES? INSIGHTS FROM A HYBRID ZONE BETWEENQUERCUS GRISEAANDQUERCUS GAMBELII

inferredcites →https://doi.org/10.1111/j.1558-5646.1999.tb05405.xopenalex-snapshot

ARE CHLOROPLAST AND MITOCHONDRIAL DNA VARIATION SPECIES INDEPENDENT IN OAKS?

inferredcites →https://doi.org/10.1111/jbi.12334openalex-snapshot

Influence of climatic niche suitability and geographical overlap on hybridization patterns among southern Californian oaks

inferredcites →https://doi.org/10.1111/mec.13269openalex-snapshot

Phylogeny and biogeography of the American live oaks (QuercussubsectionVirentes): a genomic and population genetics approach

inferredcites →https://doi.org/10.1111/nph.14413openalex-snapshot

Extensive recent secondary contacts between four European white oak species

inferredcites →https://doi.org/10.1139/gen-2016-0206openalex-snapshot

Phylogenomics reveals a complex evolutionary history of lobed-leaf white oaks in western North America

inferredcites →https://doi.org/10.1186/1471-2105-9-322openalex-snapshot

PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships

inferredcites →https://doi.org/10.1186/1471-2148-7-218openalex-snapshot

Evidence for hybridization and introgression within a species-rich oak (Quercus spp.) community

inferredcites →https://doi.org/10.1186/1471-2164-16-s10-s10openalex-snapshot

A maximum pseudo-likelihood approach for phylogenetic networks

inferredcites →https://doi.org/10.1371/journal.pgen.1005896openalex-snapshot

Inferring Phylogenetic Networks with Maximum Pseudolikelihood under Incomplete Lineage Sorting

inferredcites →https://doi.org/10.1371/journal.pone.0003376openalex-snapshot

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

inferredcites →https://doi.org/10.1371/journal.pone.0093975openalex-snapshot

A Framework Phylogeny of the American Oak Clade Based on Sequenced RAD Data

inferredcites →https://doi.org/10.1371/journal.pone.0104008openalex-snapshot

Accurate Phylogenetic Tree Reconstruction from Quartets: A Heuristic Approach

inferredcites →https://doi.org/10.14825/prpsj1951.1994.173_343openalex-snapshot

965. LOBED OAK LEAVES FROM THE TERTIARY OF EAST ASIA WITH REFERENCE TO THE OAK PHYTOGEOGRAPHY OF THE NORTHERN HEMISPHERE

inferredcites →https://doi.org/10.1600/036364408783887320openalex-snapshot

Taxonomy of Hill's Oak (Quercus ellipsoidalis: Fagaceae): Evidence from AFLP Data

inferredcites →https://doi.org/10.1600/036364408783887401openalex-snapshot

ITS and ETS Sequence Data and Phylogeny Reconstruction in Allopolyploids and Hybrids

inferredcites →https://doi.org/10.2307/1218998openalex-snapshot

THE SPECIES CONCEPT IN QUERCUS

inferredcites →https://doi.org/10.2307/1219444openalex-snapshot

ECOLOGICAL SPECIES, MULTISPECIES, AND OAKS

inferredcites →https://doi.org/10.2307/2422999openalex-snapshot

The Live Oaks of the Series Virentes

inferredcites →https://doi.org/10.2307/25066014openalex-snapshot

Molecular phylogenetics and cupule evolution in Fagaceae as inferred from nuclear CRABS CLAW sequences

inferredcites →https://doi.org/10.3732/ajb.0900195openalex-snapshot

Episodic migration of oaks to Iceland: Evidence for a North Atlantic “land bridge” in the latest Miocene

inferredcites →https://doi.org/10.3732/ajb.1100023openalex-snapshot

Genetic evidence for hybridization in red oaks (Quercus sect. Lobatae, Fagaceae)

inferredcites →https://doi.org/10.3732/ajb.91.9.1352openalex-snapshot

Natural hybridization and hybrid zones between Quercus crassifolia and Quercus crassipes (Fagaceae) in Mexico: morphological and molecular evidence

inferredcites →https://doi.org/10.5061/dryad.q5tm5openalex-snapshot

Data from: A genetic legacy of introgression confounds phylogeny and biogeography in oaks

inferredcites →https://doi.org/10.5962/bhl.title.142965openalex-snapshot

The American oaks /

inferredcites →https://doi.org/10.5962/p.185854openalex-snapshot

Hybridization and Introgression in Quercus alba

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Re-establishment of the Nearctic oak cynipid gall wasp genus Druon Kinsey, 1937 (Hymenoptera: Cynipidae: Cynipini), with description of five new species

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inferred← citeshttps://doi.org/10.1002/ajb2.16314openalex-snapshot

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inferred← citeshttps://doi.org/10.1002/ece3.4122openalex-snapshot

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Herbivore‐induced defenses are not under phylogenetic constraints in the genusQuercus(oak): Phylogenetic patterns of growth, defense, and storage

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inferred← citeshttps://doi.org/10.1002/ece3.9673openalex-snapshot

Pollinator and host sharing lead to hybridization and introgression in Panamanian free‐standing figs, but not in their pollinator wasps

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Genomic data and morphological re‐assessment reveals synonymy and hybridisation among Seringia taxa (Lasiopetaleae, Malvaceae) in remote north‐western Australia

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Oak Population Genomics

inferred← citeshttps://doi.org/10.1007/978-3-319-69099-5_2openalex-snapshot

An Updated Infrageneric Classification of the Oaks: Review of Previous Taxonomic Schemes and Synthesis of Evolutionary Patterns

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An admixture of Quercus dentata in the coastal ecotype of Q. mongolica var. crispula in northern Hokkaido and genetic and environmental effects on their traits

inferred← citeshttps://doi.org/10.1007/s10342-023-01610-8openalex-snapshot

Dissecting the continuum and unravelling the phylogeographic knot of plastid DNA in European white oaks (Quercus sect. Quercus): ancient signatures and multiple diversity reservoirs

inferred← citeshttps://doi.org/10.1007/s10722-023-01595-8openalex-snapshot

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inferred← citeshttps://doi.org/10.1007/s11295-018-1251-3openalex-snapshot

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inferred← citeshttps://doi.org/10.1007/s11295-019-1333-xopenalex-snapshot

Species diversification in a lineage of Mexican red oak (Quercus section Lobatae subsection Racemiflorae)—the interplay between distance, habitat, and hybridization

inferred← citeshttps://doi.org/10.1007/s11295-021-01522-xopenalex-snapshot

Phylogeography and phylogeny of genus Quercus L. (Fagaceae) in Turkey implied by variations of trnT(UGU)-L(UAA)-F (GAA) chloroplast DNA region

inferred← citeshttps://doi.org/10.1016/j.compbiolchem.2019.107117openalex-snapshot

Molecular evolution of the internal transcribed spacers in red oaks (Quercus sect. Lobatae)

inferred← citeshttps://doi.org/10.1016/j.foreco.2023.121243openalex-snapshot

Highly informative SNP markers for routine individual identification and certification of forest reproductive material in Quercus ilex and Q. suber and their hybrids

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The float test as a method to determine acorn viability and activity of insect herbivores during masting and non-masting years in Quercus garryana

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Phylogeny and biogeography of East Asian evergreen oaks (Quercus section Cyclobalanopsis; Fagaceae): Insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia

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Land bridges in the Pleistocene contributed to flora assembly on the continental islands of South China: Insights from the evolutionary history of Quercus championii

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Introgression is widespread in the radiation of carnivorous Nepenthes pitcher plants

inferred← citeshttps://doi.org/10.1016/j.ympev.2023.107869openalex-snapshot

Phylogenomics reveals extreme gene tree discordance in a lineage of dominant trees: hybridization, introgression, and incomplete lineage sorting blur deep evolutionary relationships despite clear species groupings in Eucalyptus subgenus Eudesmia

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Population-Level Phylogenomic Analysis Yields Insights into Species Cohesion and Population Substructure of Lobelia Section Lobelia (Campanulaceae)

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Ancient gene flow shapes phylogenetic discordance in a genus of wood-warblers (Aves: Parulidae: Leiothlypis)

inferred← citeshttps://doi.org/10.1038/s41467-022-28917-1openalex-snapshot

Phylogenomic analyses highlight innovation and introgression in the continental radiations of Fagaceae across the Northern Hemisphere

inferred← citeshttps://doi.org/10.1038/s41598-020-78576-9openalex-snapshot

Late Quaternary range shifts of marcescent oaks unveil the dynamics of a major biogeographic transition in southern Europe

inferred← citeshttps://doi.org/10.1073/pnas.2537040123openalex-snapshot

Timing and origins of Mexican and Central American oak diversity

inferred← citeshttps://doi.org/10.1080/23818107.2020.1765197openalex-snapshot

Tracking diversity and evolutionary pathways of Lebanese oak taxa through plastome analyses

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Differences in Thermal Tolerance between Parental Species Could Fuel Thermal Adaptation in Hybrid Wood Ants

inferred← citeshttps://doi.org/10.1093/aob/mcad032openalex-snapshot

Niche evolution in a northern temperate tree lineage: biogeographical legacies in cork oaks (Quercus section Cerris)

inferred← citeshttps://doi.org/10.1093/aob/mcae030openalex-snapshot

Divergence and reticulation in the Mexican white oaks: ecological and phylogenomic evidence on species limits and phylogenetic networks in the Quercus laeta complex (Fagaceae)

inferred← citeshttps://doi.org/10.1093/g3journal/jkag023openalex-snapshot

A haplotype-resolved, chromosome-scale genome assembly for the southern live oak, Quercus virginiana

inferred← citeshttps://doi.org/10.1093/gbe/evab200openalex-snapshot

Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( Gila robusta Complex) in the Colorado River

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Sampling affects population genetic inference: A case study of the Allen’s (Selasphorus sasin) and rufous hummingbird (Selasphorus rufus)

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Out of Sight, Out of Mind: Widespread Nuclear and Plastid-Nuclear Discordance in the Flowering Plant GenusPolemonium(Polemoniaceae) Suggests Widespread Historical Gene Flow Despite Limited Nuclear Signal

inferred← citeshttps://doi.org/10.1093/sysbio/syab063openalex-snapshot

Deep Ancestral Introgression Shapes Evolutionary History of Dragonflies and Damselflies

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Phylogenomics reveals patterns of ancient hybridization and differential diversification that contribute to phylogenetic conflict in willows, poplars, and close relatives

inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaf076openalex-snapshot

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Climatic niche conservatism in a clade of disease vectors (Diptera: Phlebotominae)

inferred← citeshttps://doi.org/10.1101/2022.07.12.499723openalex-snapshot

Qualitative and quantitative analysis of the constitutive bark of Q. ilex x Q. suber hybrids

inferred← citeshttps://doi.org/10.1101/2022.08.04.502839openalex-snapshot

Pollinator and host sharing lead to hybridization and introgression in Panamanian free-standing figs, but not in their pollinator wasps

inferred← citeshttps://doi.org/10.1101/2023.01.04.522772openalex-snapshot

Phylogenomics reveals patterns of ancient hybridization and differential diversification contributing to phylogenetic conflict in Populus L. and Salix L

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inferred← citeshttps://doi.org/10.1101/692509openalex-snapshot

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inferred← citeshttps://doi.org/10.1101/823641openalex-snapshot

A snapshot of progenitor-derivative speciation in action in Iberodes (Boraginaceae)

inferred← citeshttps://doi.org/10.1111/1755-0998.13264openalex-snapshot

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inferred← citeshttps://doi.org/10.1111/1755-0998.13616openalex-snapshot

A chromosome‐scale genome assembly of the Mongolian oak (Quercus mongolica)

inferred← citeshttps://doi.org/10.1111/2041-210x.13937openalex-snapshot

The RadOrgMiner pipeline: Automated genotyping of organellar loci from RADseq data

inferred← citeshttps://doi.org/10.1111/cla.12570openalex-snapshot

Introgression and incomplete lineage sorting blurred phylogenetic relationships across the genomes of sclerophyllous oaks from southwest China

inferred← citeshttps://doi.org/10.1111/eva.12677openalex-snapshot

Crop‐to‐wild hybridization in cherries—Empirical evidence from Prunus fruticosa

inferred← citeshttps://doi.org/10.1111/evo.13606openalex-snapshot

Genomic data reject the hypothesis of sympatric ecological speciation in a clade of Desmognathus salamanders

inferred← citeshttps://doi.org/10.1111/jbi.14984openalex-snapshot

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Phylogenomics and the flowering plant tree of life

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inferred← citeshttps://doi.org/10.1111/jse.12818openalex-snapshot

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inferred← citeshttps://doi.org/10.1111/mec.14795openalex-snapshot

Detecting introgression despite phylogenetic uncertainty: The case of the South American siskins

inferred← citeshttps://doi.org/10.1111/mec.14869openalex-snapshot

RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercussect.Quercus: Fagaceae)

inferred← citeshttps://doi.org/10.1111/mec.15056openalex-snapshot

Genetic evidence for species cohesion, substructure and hybrids in spruce

inferred← citeshttps://doi.org/10.1111/mec.15220openalex-snapshot

Host plant associations and geography interact to shape diversification in a specialist insect herbivore

inferred← citeshttps://doi.org/10.1111/mec.16459openalex-snapshot

A snapshot of progenitor–derivative speciation in Iberodes (Boraginaceae)

inferred← citeshttps://doi.org/10.1111/mec.17074openalex-snapshot

Notes from the taxonomic disaster zone: Evolutionary drivers of intractable species boundaries in an Australian lizard clade (Scincidae: Ctenotus )

inferred← citeshttps://doi.org/10.1111/mec.17430openalex-snapshot

Genomic insights into hybrid zone formation: The role of climate, landscape, and demography in the emergence of a novel hybrid lineage

inferred← citeshttps://doi.org/10.1111/mec.17822openalex-snapshot

Introgression, Phylogeography, and Genomic Species Cohesion in the Eastern North American White Oak Syngameon

inferred← citeshttps://doi.org/10.1111/nph.14773openalex-snapshot

Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity

inferred← citeshttps://doi.org/10.1111/nph.14951openalex-snapshot

Genomic data reveal cryptic lineage diversification and introgression in Californian golden cup oaks (section Protobalanus )

inferred← citeshttps://doi.org/10.1111/nph.15101openalex-snapshot

Gaining a global perspective on Fagaceae genomic diversification and adaptation

inferred← citeshttps://doi.org/10.1111/nph.15842openalex-snapshot

Uncovering the genomic signature of ancient introgression between white oak lineages (Quercus)

inferred← citeshttps://doi.org/10.1111/nph.16091openalex-snapshot

The oak syngameon: more than the sum of its parts

inferred← citeshttps://doi.org/10.1111/nph.16131openalex-snapshot

Environment‐dependent introgression from Quercus dentata to a coastal ecotype of Quercus mongolica var. crispula in northern Japan

inferred← citeshttps://doi.org/10.1111/nph.16162openalex-snapshot

Genomic landscape of the global oak phylogeny

inferred← citeshttps://doi.org/10.1111/nph.16274openalex-snapshot

Oaks: an evolutionary success story

inferred← citeshttps://doi.org/10.1111/nph.16320openalex-snapshot

Correlated evolution of morphology, gas exchange, growth rates and hydraulics as a response to precipitation and temperature regimes in oaks (Quercus)

inferred← citeshttps://doi.org/10.1111/nph.16980openalex-snapshot

Geographical isolation, habitat shifts and hybridisation in the diversification of the Macaronesian endemic genus Argyranthemum (Asteraceae)

inferred← citeshttps://doi.org/10.1111/nph.17649openalex-snapshot

Andean uplift, drainage basin formation, and the evolution of plants living in fast‐flowing aquatic ecosystems in northern South America

inferred← citeshttps://doi.org/10.1111/nph.18521openalex-snapshot

Contrasting continental patterns of adaptive population divergence in the holarctic ectomycorrhizal fungus Boletus edulis

inferred← citeshttps://doi.org/10.1111/nph.20463openalex-snapshot

A haplotype‐resolved reference genome of Quercus alba sheds light on the evolutionary history of oaks

inferred← citeshttps://doi.org/10.1111/oik.08308openalex-snapshot

Aboveground herbivory causes belowground changes in twelve oak Quercus species: a phylogenetic analysis of root biomass and non‐structural carbohydrate storage

inferred← citeshttps://doi.org/10.1111/tpj.15601openalex-snapshot

5S‐IGS rDNA in wind‐pollinated trees ( Fagus L.) encapsulates 55 million years of reticulate evolution and hybrid origins of modern species

inferred← citeshttps://doi.org/10.1111/tpj.16142openalex-snapshot

Deep reticulation: the long legacy of hybridization in vascular plant evolution

inferred← citeshttps://doi.org/10.1111/tpj.70565openalex-snapshot

Historical introgression as a driver of diversification of diploid Picris (Compositae) in the Mediterranean Basin

inferred← citeshttps://doi.org/10.1139/gen-2016-0191openalex-snapshot

A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny

inferred← citeshttps://doi.org/10.1139/gen-2016-0202openalex-snapshot

Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks ( Quercus section Quercus )

inferred← citeshttps://doi.org/10.1139/gen-2017-0155openalex-snapshot

The Evolution of Tree Diversity: Proceedings of the 2016 IUFRO Genomics and Forest Tree Genetics Conference, Phylogenetics and Genomic Evolution Session, Arcachon, France

inferred← citeshttps://doi.org/10.1186/s12862-019-1523-zopenalex-snapshot

Ancient events and climate adaptive capacity shaped distinct chloroplast genetic structure in the oak lineages

inferred← citeshttps://doi.org/10.1186/s12864-018-5253-1openalex-snapshot

Alignment-free genome comparison enables accurate geographic sourcing of white oak DNA

inferred← citeshttps://doi.org/10.15421/011841openalex-snapshot

Studying the genetic structure of Quercus robur forest stands on anthropogenically transformed territories using introns of the β-tubulin gene

inferred← citeshttps://doi.org/10.15625/2615-9023/19721openalex-snapshot

Phylogenetic relationships of Quercus species (Fagaceae) in Vietnam based on multiplexed inter simple sequence repeat genotyping by sequencing

inferred← citeshttps://doi.org/10.1600/036364421x16312068417039openalex-snapshot

Phylogeny, Biogeography, and Classification of the Elms (Ulmus)

inferred← citeshttps://doi.org/10.1600/036364421x16370109698524openalex-snapshot

Genome-Wide Sequence-Based Genotyping Supports a Nonhybrid Origin of Castanea alabamensis

inferred← citeshttps://doi.org/10.18474/jes21-61openalex-snapshot

Arthropod Associations Show Naturalization with Non-Native Quercus Species in the Georgia Piedmont

inferred← citeshttps://doi.org/10.21203/rs.3.rs-1551701/v1openalex-snapshot

Contrasting continental patterns of adaptive population divergence in a holarctic fungus

inferred← citeshttps://doi.org/10.22541/au.163255933.36686159/v1openalex-snapshot

A magnet to draw a bright needle out from the haystack -- RADOrgMiner, an automated pipeline to genotype organellar reads from RADseq data

inferred← citeshttps://doi.org/10.22541/au.163255933.36686159/v2openalex-snapshot

A magnet to draw a bright needle out from the haystack -- RADOrgMiner, an automated pipeline to genotype organellar reads from RADseq data

inferred← citeshttps://doi.org/10.22541/au.170664470.08421359/v1openalex-snapshot

High-Throughput Sequencing of 5S-IGS rDNA in Fagus L. (Fagaceae) reveals complex evolutionary patterns and hybrid origin of modern species

inferred← citeshttps://doi.org/10.3389/fpls.2018.00569openalex-snapshot

The Application and Limitation of Universal Chloroplast Markers in Discriminating East Asian Evergreen Oaks

inferred← citeshttps://doi.org/10.3389/fpls.2020.564414openalex-snapshot

ddRAD Sequencing-Based Identification of Genomic Boundaries and Permeability in Quercus ilex and Q. suber Hybrids

inferred← citeshttps://doi.org/10.3390/f10070587openalex-snapshot

Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Quercus bawanglingensis Huang, Li et Xing, a Vulnerable Oak Tree in China

inferred← citeshttps://doi.org/10.3390/f10090821openalex-snapshot

Spatial Genetic Patterns and Distribution Dynamics of the Rare Oak Quercus chungii: Implications for Biodiversity Conservation in Southeast China

inferred← citeshttps://doi.org/10.3390/f12060690openalex-snapshot

Use of Genomic Resources to Assess Adaptive Divergence and Introgression in Oaks

inferred← citeshttps://doi.org/10.3390/f12060786openalex-snapshot

An Updated Infrageneric Classification of the North American Oaks (Quercus Subgenus Quercus): Review of the Contribution of Phylogenomic Data to Biogeography and Species Diversity

inferred← citeshttps://doi.org/10.3390/f12070882openalex-snapshot

Quercus Conservation Genetics and Genomics: Past, Present, and Future

inferred← citeshttps://doi.org/10.3390/f12091164openalex-snapshot

Genetic Differentiation and Demographic History of Three Cerris Oak Species in China Based on Nuclear Microsatellite Makers

inferred← citeshttps://doi.org/10.3390/f16030549openalex-snapshot

Species Differentiation of Two Endemic Montane Oaks in China: Population Genetics, Ecological Niche and Leaf Morphology Analyses

inferred← citeshttps://doi.org/10.3390/f17040408openalex-snapshot

Influence of a White Oak Species Gradient on Genetic Structure and Diversity of Quercus glabrescens (Fagaceae) in Mexico

inferred← citeshttps://doi.org/10.3390/ijgi9120735openalex-snapshot

Combining Satellite Remote Sensing and Climate Data in Species Distribution Models to Improve the Conservation of Iberian White Oaks (Quercus L.)

inferred← citeshttps://doi.org/10.3390/ijms20235940openalex-snapshot

Species Identification of Oaks (Quercus L., Fagaceae) from Gene to Genome

inferred← citeshttps://doi.org/10.3390/plants11192475openalex-snapshot

Qualitative and Quantitative Anatomical Analysis of the Constitutive Bark of Q. ilex x Q. suber Hybrids

inferred← citeshttps://doi.org/10.3390/plants9081024openalex-snapshot

Framework Phylogeny, Evolution and Complex Diversification of Chinese Oaks

inferred← citeshttps://doi.org/10.3417/2019434openalex-snapshot

Genomic Identity of White Oak Species in an Eastern North American Syngameon

inferred← citeshttps://doi.org/10.3732/ajb.1700291openalex-snapshot

The evolution and diversification of the red oaks of the California Floristic Province (Quercus section Lobatae, series Agrifoliae)

inferred← citeshttps://doi.org/10.64898/2026.05.14.725274openalex-snapshot

Resolving the oak tree of life: comparing RADseq and whole genome resequencing methods for oak phylogenetics

inferred← citeshttps://doi.org/10.64898/2026.06.09.730892openalex-snapshot

The Iberian white-oak syngameon as a legacy of introgression in southern Europe

inferred← citeshttps://doi.org/10.7287/peerj.5793v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Comparative systematics and phylogeography of Quercus Section Cerris in western Eurasia: inferences from plastid and nuclear DNA variation (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.5793v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Comparative systematics and phylogeography of Quercus Section Cerris in western Eurasia: inferences from plastid and nuclear DNA variation (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.8648v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Tall Pinus luzmariae trees with genes from P. herrerae (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.8648v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Tall Pinus luzmariae trees with genes from P. herrerae (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.8648v0.1/reviews/3openalex-snapshot

Peer Review #3 of "Tall Pinus luzmariae trees with genes from P. herrerae (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.8648v0.2/reviews/1openalex-snapshot

Peer Review #1 of "Tall Pinus luzmariae trees with genes from P. herrerae (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.8648v0.2/reviews/2openalex-snapshot

Peer Review #2 of "Tall Pinus luzmariae trees with genes from P. herrerae (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.8648v0.2/reviews/3openalex-snapshot

Peer Review #3 of "Tall Pinus luzmariae trees with genes from P. herrerae (v0.2)"

inferred← citeshttps://doi.org/10.7717/peerj.5793openalex-snapshot

Comparative systematics and phylogeography of Quercus Section Cerris in western Eurasia: inferences from plastid and nuclear DNA variation

inferred← citeshttps://doi.org/10.7717/peerj.8648openalex-snapshot

Tall Pinus luzmariae trees with genes from P. herrerae

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.