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Six complete mitochondrial genomes of mayflies from three genera of Ephemerellidae (Insecta: Ephemeroptera) with inversion and translocation oftrnIrearrangement and their phylogenetic relationships

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-94-007-0872-3openalex-snapshot

The Phylogenetic System of Ephemeroptera

inferredcites →https://doi.org/10.1007/bf01215182openalex-snapshot

Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes

inferredcites →https://doi.org/10.1007/pl00006145openalex-snapshot

Nucleotide Composition Bias Affects Amino Acid Content in Proteins Coded by Animal Mitochondria

inferredcites →https://doi.org/10.1007/s10059-009-0129-5openalex-snapshot

Complete Nucleotide Sequence and Organization of the Mitogenome of the Red-Spotted Apollo Butterfly, Parnassius bremeri (Lepidoptera: Papilionidae) and Comparison with Other Lepidopteran Insects

inferredcites →https://doi.org/10.1007/s11033-009-9934-3openalex-snapshot

The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event

inferredcites →https://doi.org/10.1016/b978-0-12-804223-6.00003-2openalex-snapshot

Order Ephemeroptera

inferredcites →https://doi.org/10.1016/j.gene.2008.07.037openalex-snapshot

The complete mitochondrial genome of Parafronurus youi (Insecta: Ephemeroptera) and phylogenetic position of the Ephemeroptera

inferredcites →https://doi.org/10.1016/j.gene.2013.09.064openalex-snapshot

The mitochondrial genome of the Russian wheat aphid Diuraphis noxia: Large repetitive sequences between trnE and trnF in aphids

inferredcites →https://doi.org/10.1016/j.gene.2014.04.059openalex-snapshot

The phylogeny of Ephemeroptera in Pterygota revealed by the mitochondrial genome of Siphluriscus chinensis (Hexapoda: Insecta)

inferredcites →https://doi.org/10.1016/j.gene.2016.03.057openalex-snapshot

The complete mitochondrial genomes of four cockroaches (Insecta: Blattodea) and phylogenetic analyses within cockroaches

inferredcites →https://doi.org/10.1016/j.ijbiomac.2018.01.016openalex-snapshot

Higher tRNA gene duplication in mitogenomes of praying mantises (Dictyoptera, Mantodea) and the phylogeny within Mantodea

inferredcites →https://doi.org/10.1016/j.tree.2006.05.009openalex-snapshot

The use of genome-level characters for phylogenetic reconstruction

inferredcites →https://doi.org/10.1016/j.ympev.2005.08.008openalex-snapshot

Phylogeny of Ephemeroptera (mayflies) based on molecular evidence

inferredcites →https://doi.org/10.1016/j.ympev.2009.12.020openalex-snapshot

Molecular phylogeny of acariform mites (Acari, Arachnida): Strong conflict between phylogenetic signal and long-branch attraction artifacts

inferredcites →https://doi.org/10.1016/j.ympev.2012.08.023openalex-snapshot

MITOS: Improved de novo metazoan mitochondrial genome annotation

inferredcites →https://doi.org/10.1016/j.ympev.2013.02.019openalex-snapshot

Searching for the optimal data partitioning strategy in mitochondrial phylogenomics: A phylogeny of Acridoidea (Insecta: Orthoptera: Caelifera) as a case study

inferredcites →https://doi.org/10.1016/j.ympev.2014.03.023openalex-snapshot

Two mitochondrial genomes from the families Bethylidae and Mutillidae: Independent rearrangement of protein-coding genes and higher-level phylogeny of the Hymenoptera

inferredcites →https://doi.org/10.1016/s0074-7696(08)62066-5openalex-snapshot

Animal Mitochondrial DNA: Structure and Evolution

inferredcites →https://doi.org/10.1016/s0305-1978(96)00042-7openalex-snapshot

Insect mitochondrial control region: A review of its structure, evolution and usefulness in evolutionary studies

inferredcites →https://doi.org/10.1038/290457a0openalex-snapshot

Sequence and organization of the human mitochondrial genome

inferredcites →https://doi.org/10.1038/290470a0openalex-snapshot

tRNA punctuation model of RNA processing in human mitochondria

inferredcites →https://doi.org/10.1038/387247a0openalex-snapshot

Animal mitochondrial DNA recombination

inferredcites →https://doi.org/10.1038/s41598-019-54391-9openalex-snapshot

The mitochondrial genomes of palaeopteran insects and insights into the early insect relationships

inferredcites →https://doi.org/10.1046/j.1365-2583.2001.00258.xopenalex-snapshot

Sequence and organization of the mitochondrial genome of the Chagas disease vector, Triatoma dimidiata

inferredcites →https://doi.org/10.1046/j.1365-2583.2002.00371.xopenalex-snapshot

Arrangement and structural conservation of the mitochondrial control region of two species of Plecoptera: utility of tandem repeat‐containing regions in studies of population genetics and evolutionary history

inferredcites →https://doi.org/10.1073/pnas.0600592103openalex-snapshot

Surprising contribution to aminoacylation and translation of non-Watson–Crick pairs in tRNA

inferredcites →https://doi.org/10.1073/pnas.84.20.7183openalex-snapshot

Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards.

inferredcites →https://doi.org/10.1073/pnas.94.15.7784openalex-snapshot

Evolution of codon usage bias in Drosophila

inferredcites →https://doi.org/10.1080/10635150309327openalex-snapshot

Evaluation of the Strategy of Long-Branch Subdivision to Improve the Accuracy of Phylogenetic Methods

inferredcites →https://doi.org/10.1080/10635150500234609openalex-snapshot

An Empirical Assessment of Long-Branch Attraction Artefacts in Deep Eukaryotic Phylogenomics

inferredcites →https://doi.org/10.1080/23802359.2018.1445482openalex-snapshot

The complete mitochondrial genome of Epeorus herklotsi (Ephemeroptera: Heptageniidae) and its phylogeny

inferredcites →https://doi.org/10.1080/23802359.2018.1467233openalex-snapshot

The complete mitochondrial genome of Isonychia kiangsinensis (Ephemeroptera: Isonychiidae)

inferredcites →https://doi.org/10.1080/23802359.2018.1467239openalex-snapshot

The mitochondrial genome of Caenis sp. (Ephemeroptera: Caenidae) and the phylogeny of Ephemeroptera in Pterygota

inferredcites →https://doi.org/10.1080/23802359.2019.1698986openalex-snapshot

The mitochondrial genome of Caenis sp. (Ephemeroptera: Caenidae) from Fujian and the phylogeny of Caenidae within Ephemeroptera

inferredcites →https://doi.org/10.1080/23802359.2020.1730270openalex-snapshot

The complete mitochondrial genome of Choroterpides apiculata (Ephemeroptera: Leptophlebiidae) and its phylogenetic relationships

inferredcites →https://doi.org/10.1089/152791600459894openalex-snapshot

Primer Premier 5

inferredcites →https://doi.org/10.1093/aesa/72.1.5openalex-snapshot

The Higher Classification of the Ephemeroptera and Its Evolutionary Basis1,2

inferredcites →https://doi.org/10.1093/aesa/84.4.343openalex-snapshot

Toward a Phylogenetic Classification of the Ephemeroptera (Insecta): a Commentary on Systematics

inferredcites →https://doi.org/10.1093/aesa/87.6.651openalex-snapshot

Evolution, Weighting, and Phylogenetic Utility of Mitochondrial Gene Sequences and a Compilation of Conserved Polymerase Chain Reaction Primers

inferredcites →https://doi.org/10.1093/bioinformatics/btm598openalex-snapshot

GenomeVx: simple web-based creation of editable circular chromosome maps

inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btv372openalex-snapshot

Forna (force-directed RNA): Simple and effective online RNA secondary structure diagrams

inferredcites →https://doi.org/10.1093/dnares/dsm019openalex-snapshot

DNA Asymmetric Strand Bias Affects the Amino Acid Composition of Mitochondrial Proteins

inferredcites →https://doi.org/10.1093/dnares/dsr035openalex-snapshot

Mutation Bias is the Driving Force of Codon Usage in the Gallus gallus genome

inferredcites →https://doi.org/10.1093/embo-reports/kvd001openalex-snapshot

The G·U wobble base pair

inferredcites →https://doi.org/10.1093/genetics/133.1.97openalex-snapshot

The mitochondrial genome of the honeybee Apis mellifera: complete sequence and genome organization.

inferredcites →https://doi.org/10.1093/molbev/msn159openalex-snapshot

Rapidly Evolving Mitochondrial Genome and Directional Selection in Mitochondrial Genes in the Parasitic Wasp Nasonia (Hymenoptera: Pteromalidae)

inferredcites →https://doi.org/10.1093/molbev/msp072openalex-snapshot

Characterization of 67 Mitochondrial tRNA Gene Rearrangements in the Hymenoptera Suggests That Mitochondrial tRNA Gene Position Is Selectively Neutral

inferredcites →https://doi.org/10.1093/molbev/mss020openalex-snapshot

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

inferredcites →https://doi.org/10.1093/nar/25.24.4876openalex-snapshot

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

inferredcites →https://doi.org/10.1093/nar/27.2.573openalex-snapshot

Tandem repeats finder: a program to analyze DNA sequences

inferredcites →https://doi.org/10.1093/nar/27.8.1767openalex-snapshot

Animal mitochondrial genomes

inferredcites →https://doi.org/10.1093/nar/gkg595openalex-snapshot

Mfold web server for nucleic acid folding and hybridization prediction

inferredcites →https://doi.org/10.1093/nar/gku917openalex-snapshot

Multiplex sequencing of pooled mitochondrial genomes—a crucial step toward biodiversity analysis using mito-metagenomics

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004200openalex-snapshot

Significant Levels of Sequence Divergence and Gene Rearrangements have Occurred Between the Mitochondrial Genomes of the Wild Mulberry Silkmoth, Bombyx mandarina, and its Close Relative, the Domesticated Silkmoth, Bombyx mori

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025706openalex-snapshot

Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025999openalex-snapshot

Mitochondrial gene rearrangement in the sea cucumber genus Cucumaria

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026328openalex-snapshot

mtDNA Tandem Repeats in Domestic Dogs and Wolves: Mutation Mechanism Studied by Analysis of the Sequence of Imperfect Repeats

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026334openalex-snapshot

Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040075openalex-snapshot

The lepidopteran mitochondrial control region: structure and evolution.

inferredcites →https://doi.org/10.1093/sysbio/27.4.401openalex-snapshot

Cases in which Parsimony or Compatibility Methods will be Positively Misleading

inferredcites →https://doi.org/10.1093/sysbio/45.3.363openalex-snapshot

General Inconsistency Conditions for Maximum Parsimony: Effects of Branch Lengths and Increasing Numbers of Taxa

inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

inferredcites →https://doi.org/10.1098/rspb.2007.0169openalex-snapshot

Rapid concerted evolution in animal mitochondrial DNA

inferredcites →https://doi.org/10.1098/rspb.2017.1223openalex-snapshot

Mitochondrial phylogenomics of Hemiptera reveals adaptive innovations driving the diversification of true bugs

inferredcites →https://doi.org/10.1111/1755-0998.13096openalex-snapshot

PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

inferredcites →https://doi.org/10.1111/j.1365-3113.2009.00488.xopenalex-snapshot

Towards a new paradigm in mayfly phylogeny (Ephemeroptera): combined analysis of morphological and molecular data

inferredcites →https://doi.org/10.1111/syen.12071openalex-snapshot

How to sequence and annotate insect mitochondrial genomes for systematic and comparative genomics research

inferredcites →https://doi.org/10.1139/g08-066openalex-snapshot

Mitochondrial genome organization and phylogeny of two vespid wasps

inferredcites →https://doi.org/10.1146/annurev-ento-011613-162007openalex-snapshot

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

inferredcites →https://doi.org/10.1146/annurev.ecolsys.37.091305.110018openalex-snapshot

Incorporating Molecular Evolution into Phylogenetic Analysis, and a New Compilation of Conserved Polymerase Chain Reaction Primers for Animal Mitochondrial DNA

inferredcites →https://doi.org/10.1146/annurev.es.18.110187.001413openalex-snapshot

EVOLUTION OF ANIMAL MITOCHONDRIAL DNA: RELEVANCE FOR POPULATION BIOLOGY AND SYSTEMATICS

inferredcites →https://doi.org/10.11646/zootaxa.4092.4.4openalex-snapshot

Complete mitochondrial genomes of three crickets (Orthoptera: Gryllidae) and comparative analyses within Ensifera mitogenomes

inferredcites →https://doi.org/10.1186/1471-2148-7-s1-s4openalex-snapshot

Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model

inferredcites →https://doi.org/10.1186/1471-2148-7-s2-s8openalex-snapshot

Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of Hexapoda and Crustacea

inferredcites →https://doi.org/10.1186/1471-2164-12-35openalex-snapshot

Full mitochondrial genome sequences of two endemic Philippine hornbill species (Aves: Bucerotidae) provide evidence for pervasive mitochondrial DNA recombination

inferredcites →https://doi.org/10.1186/1471-2164-9-610openalex-snapshot

Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera)

inferredcites →https://doi.org/10.1186/s12864-015-1672-4openalex-snapshot

A novel mitochondrial genome architecture in thrips (Insecta: Thysanoptera): extreme size asymmetry among chromosomes and possible recent control region duplication

inferredcites →https://doi.org/10.1371/journal.pone.0012708openalex-snapshot

New Views on Strand Asymmetry in Insect Mitochondrial Genomes

inferredcites →https://doi.org/10.1371/journal.pone.0042056openalex-snapshot

Complete Mitochondrial Genome of the Free-Living Earwig, Challia fletcheri (Dermaptera: Pygidicranidae) and Phylogeny of Polyneoptera

inferredcites →https://doi.org/10.1371/journal.pone.0117669openalex-snapshot

The Complete Mitochondrial Genomes of Three Bristletails (Insecta: Archaeognatha): The Paraphyly of Machilidae and Insights into Archaeognathan Phylogeny

inferredcites →https://doi.org/10.1371/journal.pone.0129003openalex-snapshot

The Complete Mitochondrial Genome of Corizus tetraspilus (Hemiptera: Rhopalidae) and Phylogenetic Analysis of Pentatomomorpha

inferredcites →https://doi.org/10.1371/journal.pone.0221182openalex-snapshot

Tracking outbreak populations of the pepper weevil Anthonomus eugenii (Coleoptera; Curculionidae) using complete mitochondrial genomes

inferredcites →https://doi.org/10.1385/1-59259-192-2:71openalex-snapshot

DNASTAR's Lasergene Sequence Analysis Software

inferredcites →https://doi.org/10.3109/19401736.2014.926488openalex-snapshot

The complete mitochondrial genome of Paegniodes cupulatus (Ephemeroptera: Heptageniidae)

inferredcites →https://doi.org/10.3390/insects10060170openalex-snapshot

Mayflies (Ephemeroptera) and Their Contributions to Ecosystem Services

inferredcites →https://doi.org/10.7717/peerj.4595openalex-snapshot

Gene characteristics of the complete mitochondrial genomes of Paratoxodera polyacantha and Toxodera hauseri (Mantodea: Toxoderidae)

inferredcites →https://doi.org/10.7717/peerj.5914openalex-snapshot

Characteristics of the complete mitochondrial genome of Suhpalacsa longialata (Neuroptera, Ascalaphidae) and its phylogenetic implications

inferredcites →https://doi.org/10.7717/peerj.7633openalex-snapshot

The complete mitochondrial genomes of five longicorn beetles (Coleoptera: Cerambycidae) and phylogenetic relationships within Cerambycidae

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.4975.3.2zenodo-depositor-declared

Overview of Indian Hyrtanellini (Ephemeroptera: Ephemerellidae), with new species and records from related regions

inferred← citeshttps://doi.org/10.1002/ece3.72935openalex-snapshot

Mitochondrial Genome Characterization of Six Spiny Crawler Mayflies and Comparative Analysis Within Ephemerellidae (Ephemeroptera: Pannota)

inferred← citeshttps://doi.org/10.1007/s12038-023-00357-zopenalex-snapshot

Characterization of complete mitochondrial genomes of five noctuoid moths (Lepidoptera: Noctuoidea) and their phylogenetic implications

inferred← citeshttps://doi.org/10.1016/j.earscirev.2024.104767openalex-snapshot

A time-calibrated ‘Tree of Life’ of aquatic insects for knitting historical patterns of evolution and measuring extant phylogenetic biodiversity across the world

inferred← citeshttps://doi.org/10.1016/j.gene.2021.145467openalex-snapshot

Complete mitochondrial genomes of Epeorus carinatus and E. dayongensis (Ephemeroptera: Heptageniidae): Genomic comparison and phylogenetic inference

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The complete mitochondrial genome of Choroterpes (Euthralus) yixingensis (Ephemeroptera: Leptophlebiidae) and its mitochondrial protein-coding gene expression under imidacloprid stress

inferred← citeshttps://doi.org/10.1016/j.gene.2023.147603openalex-snapshot

Novel gene rearrangements in mitochondrial genomes of four families of praying mantises (Insecta, Mantodea) and phylogenetic relationships of Mantodea

inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2021.06.096openalex-snapshot

Novel tRNA gene rearrangements in the mitochondrial genomes of praying mantises (Mantodea: Mantidae): Translocation, duplication and pseudogenization

inferred← citeshttps://doi.org/10.1038/s41598-026-70969-6openalex-snapshot

Redescription and revision of Georges Demoulin’s Eocene Baltic amber Heptageniidae (Insecta: Ephemeroptera)

inferred← citeshttps://doi.org/10.1080/23802359.2021.1974966openalex-snapshot

Three mitochondrial genomes of early-winged insects (Ephemeroptera: Baetidae and Leptophlebiidae)

inferred← citeshttps://doi.org/10.1080/23802359.2022.2086498openalex-snapshot

The first complete mitochondrial genome of Hexagenia rigida Mc Dunnough, 1924 (Ephemeroptera: Ephemeridae) and its phylogeny

inferred← citeshttps://doi.org/10.1111/syen.12504openalex-snapshot

Mitochondrial genomes within bark lice (Insecta: Psocodea: Psocomorpha) reveal novel gene rearrangements containing phylogenetic signal

inferred← citeshttps://doi.org/10.3103/s0095452723040084openalex-snapshot

Comparative Analysis of the Complete Mitochondrial Genome Sequence of an Alpine Plant Triosteum pinnatifidum

inferred← citeshttps://doi.org/10.3390/genes12121875openalex-snapshot

The First Two Complete Mitochondrial Genomes of Neoephemeridae (Ephemeroptera): Comparative Analysis and Phylogenetic Implication for Furcatergalia

inferred← citeshttps://doi.org/10.3390/genes13101780openalex-snapshot

The Genetic Diversity and the Divergence Time in Extant Primitive Mayfly, Siphluriscus chinensis Ulmer, 1920 Using the Mitochondrial Genome

inferred← citeshttps://doi.org/10.3390/ijms232012094openalex-snapshot

Evolution of Gene Arrangements in the Mitogenomes of Ensifera and Characterization of the Complete Mitogenome of Schizodactylus jimo

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Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes

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Three Complete Mitochondrial Genomes of Orestes guangxiensis, Peruphasma schultei, and Phryganistria guangxiensis (Insecta: Phasmatodea) and Their Phylogeny

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Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia

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Increasing 28 mitogenomes of Ephemeroptera, Odonata and Plecoptera support the Chiastomyaria hypothesis with three different outgroup combinations

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