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Model of Amino Acid Substitution in Proteins Encoded by Mitochondrial DNA

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Strand Asymmetry in Human Mitochondrial DNA Mutations

inferredcites →https://doi.org/10.1006/mpev.1993.1001openalex-snapshot

Relative Efficiencies of the Maximum Likelihood, Maximum Parsimony, and Neighbor-Joining Methods for Estimating Protein Phylogeny

inferredcites →https://doi.org/10.1007/bf00160258openalex-snapshot

Man's place in hominoidea revealed by mitochondrial DNA genealogy

inferredcites →https://doi.org/10.1007/bf00160463openalex-snapshot

The complete mitochondrial DNA sequence of the harbor seal, Phoca vitulina

inferredcites →https://doi.org/10.1007/bf00160483openalex-snapshot

Tempo and mode of mitochondrial DNA evolution in vertebrates at the amino acid sequence level: Rapid evolution in warm-blooded vertebrates

inferredcites →https://doi.org/10.1007/bf00163848openalex-snapshot

Inching toward reality: An improved likelihood model of sequence evolution

inferredcites →https://doi.org/10.1007/bf00166161openalex-snapshot

The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome

inferredcites →https://doi.org/10.1007/bf00173174openalex-snapshot

The complete nucleotide sequence of the mitochondrial DNA genome of the rainbow trout, Oncorhynchus mykiss

inferredcites →https://doi.org/10.1007/bf00173421openalex-snapshot

Phylogenetic relationships among eutherian orders estimated from inferred sequences of mitochondrial proteins: Instability of a tree based on a single gene

inferredcites →https://doi.org/10.1007/bf00178256openalex-snapshot

Estimating the pattern of nucleotide substitution

inferredcites →https://doi.org/10.1007/bf00178861openalex-snapshot

Comparison between the complete mtDNA sequences of the blue and the fin whale, two species that can hybridize in nature

inferredcites →https://doi.org/10.1007/bf00178862openalex-snapshot

The nucleotide sequence of the mitochondrial DNA molecule of the grey seal, Halichoerus grypus, and a comparison with mitochondrial sequences of other true seals

inferredcites →https://doi.org/10.1007/bf01734101openalex-snapshot

Mitochondrial DNA sequences of primates: Tempo and mode of evolution

inferredcites →https://doi.org/10.1007/bf01734359openalex-snapshot

Evolutionary trees from DNA sequences: A maximum likelihood approach

inferredcites →https://doi.org/10.1007/bf02100115openalex-snapshot

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

inferredcites →https://doi.org/10.1007/bf02102808openalex-snapshot

The complete nucleotide sequence of the mitochondrial DNA of the fin whale,Balaenoptera physalus

inferredcites →https://doi.org/10.1007/bf02109483openalex-snapshot

Maximum likelihood inference of protein phylogeny and the origin of chloroplasts

inferredcites →https://doi.org/10.1007/bf02515385openalex-snapshot

Evolution of the cytochromeb gene of mammals

inferredcites →https://doi.org/10.1007/bf02602930openalex-snapshot

The complete nucleotide sequence of theRattus norvegicus mitochondrial genome: Cryptic signals revealed by comparative analysis between vertebrates

inferredcites →https://doi.org/10.1016/0022-2836(71)90390-1openalex-snapshot

Tests for comparing related amino-acid sequences. Cytochrome c and cytochrome c551

inferredcites →https://doi.org/10.1016/0022-2836(82)90137-1openalex-snapshot

Complete sequence of bovine mitochondrial DNA conserved features of the mammalian mitochondrial genome

inferredcites →https://doi.org/10.1016/0022-2836(90)90225-bopenalex-snapshot

Sequence and gene organization of the chicken mitochondrial genome

inferredcites →https://doi.org/10.1016/0092-8674(81)90300-7openalex-snapshot

Sequence and gene organization of mouse mitochondrial DNA

inferredcites →https://doi.org/10.1016/0378-1119(94)90713-7openalex-snapshot

The complete mitochondrial DNA sequence of the horse, Equus caballus: extensive heteroplasmy of the control region

inferredcites →https://doi.org/10.1016/s0006-291x(05)80276-1openalex-snapshot

Distinct clustering of point mutations in mitochondrial DNA among patients with mitochondrial encephalomyopathies and with Parkinson's disease

inferredcites →https://doi.org/10.1016/s0021-9258(17)39303-1openalex-snapshot

The complete nucleotide sequence of the Xenopus laevis mitochondrial genome.

inferredcites →https://doi.org/10.1016/s0022-5193(05)80031-1openalex-snapshot

Stochastic traits of molecular evolution—Acceptance of point mutations in native actin genes

inferredcites →https://doi.org/10.1017/cbo9780511623486openalex-snapshot

The Neutral Theory of Molecular Evolution

inferredcites →https://doi.org/10.1038/290457a0openalex-snapshot

Sequence and organization of the human mitochondrial genome

inferredcites →https://doi.org/10.1038/361603a0openalex-snapshot

The powers and pitfalls of parsimony

inferredcites →https://doi.org/10.1038/367026a0openalex-snapshot

Parsimony or statistics?

inferredcites →https://doi.org/10.1038/373565b0openalex-snapshot

Hydrophobicity and phylogeny

inferredcites →https://doi.org/10.1038/scientificamerican1179-98openalex-snapshot

The Neutral Theory of Molecular Evolution

inferredcites →https://doi.org/10.1073/pnas.92.2.532openalex-snapshot

Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs.

inferredcites →https://doi.org/10.1093/bioinformatics/8.3.275openalex-snapshot

The rapid generation of mutation data matrices from protein sequences

inferredcites →https://doi.org/10.1093/genetics/137.1.243openalex-snapshot

The marsupial mitochondrial genome and the evolution of placental mammals.

inferredcites →https://doi.org/10.1093/genetics/139.2.873openalex-snapshot

Complete sequence of a sea lamprey (Petromyzon marinus) mitochondrial genome: early establishment of the vertebrate genome organization.

inferredcites →https://doi.org/10.1093/nar/20.18.4853openalex-snapshot

The complete nucleotide sequence of theCrossostoma lacustremitochondrial genome: conservation and variations among vertebrates

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040152openalex-snapshot

A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040153openalex-snapshot

A codon-based model of nucleotide substitution for protein-coding DNA sequences.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040187openalex-snapshot

Phylogeny of whales: dependence of the inference on species sampling.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040211openalex-snapshot

Unequal Base Frequencies and the Estimation of Substitution Rates

inferredcites →https://doi.org/10.1093/sysbio/43.4.482openalex-snapshot

Compositional Bias, Character-State Bias, and Character-State Reconstruction Using Parsimony

inferredcites →https://doi.org/10.1126/science.185.4154.862openalex-snapshot

Amino Acid Difference Formula to Help Explain Protein Evolution

inferredcites →https://doi.org/10.1126/science.7809632openalex-snapshot

Assessing Molecular Phylogenies

inferredcites →https://doi.org/10.1126/science.7809633openalex-snapshot

Assessing Molecular Phylogenies

inferredcites →https://doi.org/10.1266/jjg.64.243openalex-snapshot

Heterogeneity of tempo and mode of mitochondrial DNA evolution among mammalian orders.

inferredcites →https://doi.org/10.2307/2992355openalex-snapshot

Maximum Likelihood Inference of Phylogenetic Trees, with Special Reference to a Poisson Process Model of DNA Substitution and to Parsimony Analyses

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Two families of non-LTR retrotransposons, Syrinx and Daphne, from the Darwinulid ostracod, Darwinula stevensoni

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New candidate species most closely related to penguins

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Complete mitochondrial genomes of three neobatrachian anurans: A case study of divergence time estimation using different data and calibration settings

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Complete nucleotide sequence and organization of the mitogenome of the silk moth Caligula boisduvalii (Lepidoptera: Saturniidae) and comparison with other lepidopteran insects

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Effect of taxon sampling on recovering the phylogeny of squamate reptiles based on complete mitochondrial genome and nuclear gene sequence data

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Molecular phylogeny and evolution of prosimians based on complete sequences of mitochondrial DNAs

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Special issue on phylogenomics and its future

inferred← citeshttps://doi.org/10.1016/j.gene.2009.04.018openalex-snapshot

The complete mitochondrial genome of the large-headed frog, Limnonectes bannaensis (Amphibia: Anura), and a novel gene organization in the vertebrate mtDNA

inferred← citeshttps://doi.org/10.1016/j.gene.2009.09.014openalex-snapshot

The origin of peroxisomes: The possibility of an actinobacterial symbiosis

inferred← citeshttps://doi.org/10.1016/j.gene.2012.10.019openalex-snapshot

Phylogeny and biogeography of highly diverged freshwater fish species (Leuciscinae, Cyprinidae, Teleostei) inferred from mitochondrial genome analysis

inferred← citeshttps://doi.org/10.1016/j.gene.2012.12.093openalex-snapshot

Complete mitochondrial genomes from four subspecies of common chaffinch (Fringilla coelebs): New inferences about mitochondrial rate heterogeneity, neutral theory, and phylogenetic relationships within the order Passeriformes

inferred← citeshttps://doi.org/10.1016/j.gene.2013.07.059openalex-snapshot

Jumping and gliding rodents: Mitogenomic affinities of Pedetidae and Anomaluridae deduced from an RNA-Seq approach

inferred← citeshttps://doi.org/10.1016/j.gene.2013.10.041openalex-snapshot

Eight new mtDNA sequences of glass sponges reveal an extensive usage of + 1 frameshifting in mitochondrial translation

inferred← citeshttps://doi.org/10.1016/j.gene.2014.05.065openalex-snapshot

ITS2, 18S, 16S or any other RNA — simply aligning sequences and their individual secondary structures simultaneously by an automatic approach

inferred← citeshttps://doi.org/10.1016/j.gene.2015.07.022openalex-snapshot

The mitochondrial genome of the Saunders's gull Chroicocephalus saundersi (Charadriiformes: Laridae) and a higher phylogeny of shorebirds (Charadriiformes)

inferred← citeshttps://doi.org/10.1016/j.gene.2015.11.012openalex-snapshot

Characterization of the complete mitochondrial genome of the storage mite pest Tyrophagus longior (Gervais) (Acari: Acaridae) and comparative mitogenomic analysis of four acarid mites

inferred← citeshttps://doi.org/10.1016/j.ijpara.2005.10.004openalex-snapshot

The complete mitochondrial genome of Anisakis simplex (Ascaridida: Nematoda) and phylogenetic implications

inferred← citeshttps://doi.org/10.1016/j.jbiosc.2020.09.017openalex-snapshot

Biotransformation of celastrol to a novel, well-soluble, low-toxic and anti-oxidative celastrol-29-O-β-glucoside by Bacillus glycosyltransferases

inferred← citeshttps://doi.org/10.1016/j.jmb.2011.06.005openalex-snapshot

Markovian and Non-Markovian Protein Sequence Evolution: Aggregated Markov Process Models

inferred← citeshttps://doi.org/10.1016/j.jsb.2003.11.020openalex-snapshot

Phylogenetic analysis of AAA proteins

inferred← citeshttps://doi.org/10.1016/j.jtbi.2003.12.010openalex-snapshot

A new criterion and method for amino acid classification

inferred← citeshttps://doi.org/10.1016/j.jtbi.2011.12.026openalex-snapshot

An overlapping genetic code for frameshifted overlapping genes in Drosophila mitochondria: Antisense antitermination tRNAs UAR insert serine

inferred← citeshttps://doi.org/10.1016/j.margen.2015.08.005openalex-snapshot

Mitochondrial gene order variation in the brachiopod Lingula anatina and its implications for mitochondrial evolution in lophotrochozoans

inferred← citeshttps://doi.org/10.1016/j.margen.2016.04.005openalex-snapshot

The mitochondrial genome sequence of a deep-sea, hydrothermal vent limpet, Lepetodrilus nux, presents a novel vetigastropod gene arrangement

inferred← citeshttps://doi.org/10.1016/j.pbiomolbio.2017.02.004openalex-snapshot

Depth dependent amino acid substitution matrices and their use in predicting deleterious mutations

inferred← citeshttps://doi.org/10.1016/j.ympev.2003.07.005openalex-snapshot

Complete mitochondrial genome DNA sequence for two ophiuroids and a holothuroid: the utility of protein gene sequence and gene maps in the analyses of deep deuterostome phylogeny

inferred← citeshttps://doi.org/10.1016/j.ympev.2003.07.019openalex-snapshot

A preliminary molecular and morphological phylogeny of the Antarctic Epimeriidae and Iphimediidae (Crustacea, Amphipoda)

inferred← citeshttps://doi.org/10.1016/j.ympev.2003.08.003openalex-snapshot

Molecular insights into Cumacean family relationships (Crustacea, Cumacea)

inferred← citeshttps://doi.org/10.1016/j.ympev.2003.08.007openalex-snapshot

The complete sequence and gene organization of the mitochondrial genome of the gadilid scaphopod Siphonondentalium lobatum (Mollusca)

inferred← citeshttps://doi.org/10.1016/j.ympev.2004.05.014openalex-snapshot

Phylogeny of caecilian amphibians (Gymnophiona) based on complete mitochondrial genomes and nuclear RAG1

inferred← citeshttps://doi.org/10.1016/j.ympev.2004.06.002openalex-snapshot

Mitochondrial genome data support the basal position of Acoelomorpha and the polyphyly of the Platyhelminthes

inferred← citeshttps://doi.org/10.1016/j.ympev.2004.06.008openalex-snapshot

Phylogenetic relationships among Opisthobranchia (Mollusca: Gastropoda) based on mitochondrial cox 1, trnV, and rrnL genes

inferred← citeshttps://doi.org/10.1016/j.ympev.2004.06.011openalex-snapshot

Ascidian molecular phylogeny inferred from mtDNA data with emphasis on the Aplousobranchiata

inferred← citeshttps://doi.org/10.1016/j.ympev.2004.11.005openalex-snapshot

The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae)

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.05.009openalex-snapshot

Molecular phylogeny of the benthic shallow-water octopuses (Cephalopoda: Octopodinae)

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.06.009openalex-snapshot

Molecular phylogenetics of ‘river dolphins’ and the baiji mitochondrial genome

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.10.018openalex-snapshot

Extensive mitochondrial gene arrangements in coleoid Cephalopoda and their phylogenetic implications

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.11.004openalex-snapshot

The complete mitochondrial genomes of the sea lily Gymnocrinus richeri and the feather star Phanogenia gracilis: Signature nucleotide bias and unique nad4L gene rearrangement within crinoids

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.11.021openalex-snapshot

Complete nucleotide sequence of the mitochondrial genome of a Malagasy poison frog Mantella madagascariensis: Evolutionary implications on mitochondrial genomes of higher anuran groups

inferred← citeshttps://doi.org/10.1016/j.ympev.2006.03.032openalex-snapshot

Balaenoptera omurai is a newly discovered baleen whale that represents an ancient evolutionary lineage

inferred← citeshttps://doi.org/10.1016/j.ympev.2006.06.010openalex-snapshot

A molecular phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on mitochondrial protein-coding sequences

inferred← citeshttps://doi.org/10.1016/j.ympev.2007.05.009openalex-snapshot

Mitochondrial genome structure and evolution in the living fossil vampire squid, Vampyroteuthis infernalis, and extant cephalopods

inferred← citeshttps://doi.org/10.1016/j.ympev.2007.06.018openalex-snapshot

Extended mitogenomic phylogenetic analyses yield new insight into crocodylian evolution and their survival of the Cretaceous–Tertiary boundary

inferred← citeshttps://doi.org/10.1016/j.ympev.2008.10.010openalex-snapshot

Arachnid relationships based on mitochondrial genomes: Asymmetric nucleotide and amino acid bias affects phylogenetic analyses

inferred← citeshttps://doi.org/10.1016/j.ympev.2008.10.016openalex-snapshot

Unique patterns of pelvic fin evolution: A case study of balistoid fishes (Pisces: Tetraodontiformes) based on whole mitochondrial genome sequences

inferred← citeshttps://doi.org/10.1016/j.ympev.2009.01.011openalex-snapshot

MtZoa: A general mitochondrial amino acid substitutions model for animal evolutionary studies

inferred← citeshttps://doi.org/10.1016/j.ympev.2009.01.020openalex-snapshot

The historical biogeography of the freshwater knifefishes using mitogenomic approaches: A Mesozoic origin of the Asian notopterids (Actinopterygii: Osteoglossomorpha)

inferred← citeshttps://doi.org/10.1016/j.ympev.2009.05.020openalex-snapshot

Examining the utility of categorical models and alleviating artifacts in phylogenetic reconstruction of the Squamata (Reptilia)

inferred← citeshttps://doi.org/10.1016/j.ympev.2009.06.018openalex-snapshot

A mitogenomic perspective on the phylogeny and biogeography of living caecilians (Amphibia: Gymnophiona)

inferred← citeshttps://doi.org/10.1016/j.ympev.2010.01.035openalex-snapshot

Mitochondrial genome evolution in Ophiuroidea, Echinoidea, and Holothuroidea: Insights in phylogenetic relationships of Echinodermata

inferred← citeshttps://doi.org/10.1016/j.ympev.2010.10.013openalex-snapshot

Exploring the molecular phylogeny of phasmids with whole mitochondrial genome sequences

inferred← citeshttps://doi.org/10.1016/j.ympev.2011.12.012openalex-snapshot

Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea)

inferred← citeshttps://doi.org/10.1016/j.ympev.2012.09.017openalex-snapshot

Phylogenetic analyses of endoparasitic Acanthocephala based on mitochondrial genomes suggest secondary loss of sensory organs

inferred← citeshttps://doi.org/10.1016/j.ympev.2012.09.019openalex-snapshot

Bioinformatics methods for the comparative analysis of metazoan mitochondrial genome sequences

inferred← citeshttps://doi.org/10.1016/j.ympev.2013.02.011openalex-snapshot

Assessing statistical reliability of phylogenetic trees via a speedy double bootstrap method

inferred← citeshttps://doi.org/10.1016/j.ympev.2015.08.026openalex-snapshot

A codon model of nucleotide substitution with selection on synonymous codon usage

inferred← citeshttps://doi.org/10.1016/j.ympev.2015.12.011openalex-snapshot

Whole genome/proteome based phylogeny reconstruction for prokaryotes using higher order Markov model and chaos game representation

inferred← citeshttps://doi.org/10.1016/j.ympev.2025.108473openalex-snapshot

Trends in substitution models of protein evolution for phylogenetic inference

inferred← citeshttps://doi.org/10.1016/s0027-5107(99)00237-7openalex-snapshot

Species differences in peroxisome proliferation; mechanisms and relevance

inferred← citeshttps://doi.org/10.1016/s0076-6879(02)43142-4openalex-snapshot

Synthetic gene technology: Applications to ancestral gene reconstruction and structure-function studies of receptors

inferred← citeshttps://doi.org/10.1016/s0076-6879(05)95034-9openalex-snapshot

Applications of Ancestral Protein Reconstruction in Understanding Protein Function: GFP-Like Proteins

inferred← citeshttps://doi.org/10.1016/s0168-9525(01)02272-7openalex-snapshot

Molecular phylogenetics: state-of-the-art methods for looking into the past

inferred← citeshttps://doi.org/10.1016/s0169-5347(99)01778-4openalex-snapshot

Recreating ancestral proteins

inferred← citeshttps://doi.org/10.1016/s0378-1119(00)00425-xopenalex-snapshot

Phylogenetic position of turtles among amniotes: evidence from mitochondrial and nuclear genes

inferred← citeshttps://doi.org/10.1016/s0378-1119(02)00689-3openalex-snapshot

Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes

inferred← citeshttps://doi.org/10.1016/s0378-1119(03)00655-3openalex-snapshot

Complete nucleotide sequence of the mitochondrial genome of a salamander, Mertensiella luschani

inferred← citeshttps://doi.org/10.1016/s0378-1119(98)00229-7openalex-snapshot

Eubacterial origin of nuclear genes for chloroplast and cytosolic glucose-6-phosphate isomerase from spinach: sampling eubacterial gene diversity in eukaryotic chromosomes through symbiosis

inferred← citeshttps://doi.org/10.1016/s0959-437x(00)00142-8openalex-snapshot

Models of protein sequence evolution and their applications

inferred← citeshttps://doi.org/10.1016/s1016-8478(23)07372-7openalex-snapshot

Complete Mitochondrial Genome of a Troglobite Millipede Antrokoreana gracilipes (Diplopoda, Juliformia, Julida), and Juliformian Phylogeny

inferred← citeshttps://doi.org/10.1016/s1016-8478(23)10729-1openalex-snapshot

Characterization of the Complete Mitochondrial Genome of Diphyllobothrium nihonkaiense (Diphyllobothriidae: Cestoda), and Development of Molecular Markers for Differentiating Fish Tapeworms

inferred← citeshttps://doi.org/10.1016/s1055-7903(02)00335-4openalex-snapshot

Sequence and phylogenetic analysis of the complete mitochondrial genome of the flour beetle Tribolium castanaeum

inferred← citeshttps://doi.org/10.1016/s1055-7903(02)00421-9openalex-snapshot

Phylogenetic and genomic analysis of the complete mitochondrial DNA sequence of the spotted asparagus beetle Crioceris duodecimpunctata

inferred← citeshttps://doi.org/10.1017/s003118200600206xopenalex-snapshot

Characterization of the mitochondrial genome ofDiphyllobothrium latum(Cestoda: Pseudophyllidea) – implications for the phylogeny of eucestodes

inferred← citeshttps://doi.org/10.1023/a:1020501622015openalex-snapshot

Phylogenetic Relationships Between the Orders Artiodactyla and Cetacea: A Combined Assessment of Morphological and Molecular Evidence

inferred← citeshttps://doi.org/10.1038/30234openalex-snapshot

Gene transfer to the nucleus and the evolution of chloroplasts

inferred← citeshttps://doi.org/10.1038/35093090openalex-snapshot

Mitochondrial protein phylogeny joins myriapods with chelicerates

inferred← citeshttps://doi.org/10.1038/s41598-020-76088-0openalex-snapshot

Prediction of mitochondrial genome-wide variation through sequencing of mitochondrion-enriched extracts

inferred← citeshttps://doi.org/10.1038/s41598-024-72572-zopenalex-snapshot

Population genetics of Babesia vogeli based on the mitochondrial cytochrome b gene

inferred← citeshttps://doi.org/10.1038/srep17345openalex-snapshot

Exploring molecular variation in Schistosoma japonicum in China

inferred← citeshttps://doi.org/10.1042/bj3320689openalex-snapshot

Molecular basis of non-responsiveness to peroxisome proliferators: the guinea-pig PPARα is functional and mediates peroxisome proliferator-induced hypolipidaemia

inferred← citeshttps://doi.org/10.1046/j.1095-8312.2003.00186.xopenalex-snapshot

Evolution in the slow lane: molecular rates of evolution in sexual and asexual ostracods (Crustacea: Ostracoda)

inferred← citeshttps://doi.org/10.1046/j.1365-2052.2001.00795.xopenalex-snapshot

Complete sequence of the Japanese quail (Coturnix japonica) mitochondrial genome and its genetic relationship with related species

inferred← citeshttps://doi.org/10.1046/j.1420-9101.2000.00237.xopenalex-snapshot

Phylogenetic evidence for a single, ancestral origin of a ‘true’ worker caste in termites

inferred← citeshttps://doi.org/10.1046/j.1463-6409.2000.00037.xopenalex-snapshot

Subordinal artiodactyl relationships in the light of phylogenetic analysis of 12 mitochondrial protein‐coding genes

inferred← citeshttps://doi.org/10.1046/j.1463-6409.2000.00045.xopenalex-snapshot

Phylogenetic position of the Tenrecs (Mammalia: Tenrecidae) of Madagascar based on analysis of the complete mitochondrial genome sequence of Echinops telfairi

inferred← citeshttps://doi.org/10.1073/pnas.0603797103openalex-snapshot

Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions

inferred← citeshttps://doi.org/10.1073/pnas.94.4.1276openalex-snapshot

The complete mitochondrial genome of the wallaroo ( Macropus robustus ) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria

inferred← citeshttps://doi.org/10.1073/pnas.95.24.14226openalex-snapshot

Complete mitochondrial genome suggests diapsid affinities of turtles

inferred← citeshttps://doi.org/10.1073/pnas.96.5.2177openalex-snapshot

Molecular studies suggest that cartilaginous fishes have a terminal position in the piscine tree

inferred← citeshttps://doi.org/10.1080/09670262.2016.1252857openalex-snapshot

Pathogens of brown algae: culture studies of Anisolpidium ectocarpii and A. rosenvingei reveal that the Anisolpidiales are uniflagellated oomycetes

inferred← citeshttps://doi.org/10.1080/1042517031000089487openalex-snapshot

The Complete Nucleotide Sequence of Goat (Capra hircus) Mitochondrial Genome

inferred← citeshttps://doi.org/10.1080/10425170400019318openalex-snapshot

Water Buffalo (Bubalus bubalis): Complete Nucleotide Mitochondrial Genome Sequence

inferred← citeshttps://doi.org/10.1080/10425170701289883openalex-snapshot

Complete mitochondrial genome of a Chinese scorpion Mesobuthus martensii (Chelicerata, Scorpiones, Buthidae)

inferred← citeshttps://doi.org/10.1080/10425170701550599openalex-snapshot

Complete nucleotide mtDNA sequence of Barbary sheep (Ammotragus lervia)

inferred← citeshttps://doi.org/10.1080/10635150290069913openalex-snapshot

An Approximately Unbiased Test of Phylogenetic Tree Selection

inferred← citeshttps://doi.org/10.1080/10635150390192726openalex-snapshot

Molecular and Morphological Phylogenies of Ruminantia and the Alternative Position of the Moschidae

inferred← citeshttps://doi.org/10.1080/10635150500354688openalex-snapshot

An Empirical Examination of the Utility of Codon-Substitution Models in Phylogeny Reconstruction

inferred← citeshttps://doi.org/10.1080/10635150500481614openalex-snapshot

Combined Mitochondrial and Nuclear DNA Sequences Resolve the Interrelations of the Major Australasian Marsupial Radiations

inferred← citeshttps://doi.org/10.1080/10635150590905939openalex-snapshot

Mitochondrial Phylogenetics and Evolution of Mysticete Whales

inferred← citeshttps://doi.org/10.1080/10635150590906055openalex-snapshot

Visualizing Conflicting Evolutionary Hypotheses in Large Collections of Trees: Using Consensus Networks to Study the Origins of Placentals and Hexapods

inferred← citeshttps://doi.org/10.1080/10635150600812544openalex-snapshot

Searching for Convergence in Phylogenetic Markov Chain Monte Carlo

inferred← citeshttps://doi.org/10.1080/10635150802158670openalex-snapshot

Synonymous Substitutions Substantially Improve Evolutionary Inference from Highly Diverged Proteins

inferred← citeshttps://doi.org/10.1080/106351599260427openalex-snapshot

Using Novel Phylogenetic Methods to Evaluate Mammalian mtDNA, Including Amino Acid-Invariant Sites-LogDet plus Site Stripping, to Detect Internal Conflicts in the Data, with Special Reference to the Positions of Hedgehog, Armadillo, and Elephant

inferred← citeshttps://doi.org/10.1080/106351599260454openalex-snapshot

Mammalian Evolution: Timing and Implications from Using the LogDeterminant Transform for Proteins of Differing Amino Acid Composition

inferred← citeshttps://doi.org/10.1080/19401730802350998openalex-snapshot

Complete mitochondrial DNA sequence of the yellowfin seabreamAcanthopagrus latusand a genomic comparison among closely related sparid species

inferred← citeshttps://doi.org/10.1080/19401730802644978openalex-snapshot

Complete mitogenome sequence of the jewel beetle,Chrysochroa fulgidissima(Coleoptera: Buprestidae)

inferred← citeshttps://doi.org/10.1080/19768354.2015.1105866openalex-snapshot

The complete mitogenome of the wood-feeding cockroachCryptocercus kyebangensis(Blattodea: Cryptocercidae) and phylogenetic relations among cockroach families

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