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Architecture of the Atg17 Complex as a Scaffold for Autophagosome Biogenesis
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae
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Overcoming Expression and Purification Problems of RhoGDI Using a Family of “Parallel” Expression Vectors
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A Modular Polycistronic Expression System for Overexpressing Protein Complexes in Escherichia coli
inferredcites →https://doi.org/10.1007/1-59745-466-4_24openalex-snapshot
Monitoring Autophagy in Yeast
inferredcites →https://doi.org/10.1016/0378-1119(88)90185-0openalex-snapshot
New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites
inferredcites →https://doi.org/10.1016/j.bbrc.2005.10.163openalex-snapshot
Characterization of a novel autophagy-specific gene, ATG29
inferredcites →https://doi.org/10.1016/j.bbrc.2007.02.150openalex-snapshot
Cis1/Atg31 is required for autophagosome formation in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1016/j.bbrc.2009.09.034openalex-snapshot
Characterization of the Atg17–Atg29–Atg31 complex specifically required for starvation-induced autophagy in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1016/j.bpj.2011.06.046openalex-snapshot
Prediction of Hydrodynamic and Other Solution Properties of Rigid Proteins from Atomic- and Residue-Level Models
inferredcites →https://doi.org/10.1016/j.ceb.2009.12.004openalex-snapshot
The role of the Atg1/ULK1 complex in autophagy regulation
inferredcites →https://doi.org/10.1016/j.cell.2009.04.010openalex-snapshot
The BAR Domain Superfamily: Membrane-Molding Macromolecules
inferredcites →https://doi.org/10.1016/j.cell.2011.06.022openalex-snapshot
SNARE Proteins Are Required for Macroautophagy
inferredcites →https://doi.org/10.1016/j.cell.2011.06.023openalex-snapshot
Autophagosome Precursor Maturation Requires Homotypic Fusion
inferredcites →https://doi.org/10.1016/j.cub.2011.11.034openalex-snapshot
Mechanisms of Autophagosome Biogenesis
inferredcites →https://doi.org/10.1016/j.febslet.2010.02.001openalex-snapshot
Current knowledge of the pre‐autophagosomal structure (PAS)
inferredcites →https://doi.org/10.1016/j.jmb.2007.05.022openalex-snapshot
Inference of Macromolecular Assemblies from Crystalline State
inferredcites →https://doi.org/10.1017/s0033583503003871openalex-snapshot
Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solution
inferredcites →https://doi.org/10.1038/nature06639openalex-snapshot
Autophagy fights disease through cellular self-digestion
inferredcites →https://doi.org/10.1038/ncb1634openalex-snapshot
Bif-1 interacts with Beclin 1 through UVRAG and regulates autophagy and tumorigenesis
inferredcites →https://doi.org/10.1038/nrm2708openalex-snapshot
Dynamics and diversity in autophagy mechanisms: lessons from yeast
inferredcites →https://doi.org/10.1038/nsmb.2162openalex-snapshot
Intrinsic tethering activity of endosomal Rab proteins
inferredcites →https://doi.org/10.1038/onc.2012.262openalex-snapshot
FIP200 inhibits β-catenin-mediated transcription by promoting APC-independent β-catenin ubiquitination
inferredcites →https://doi.org/10.1073/pnas.0602606103openalex-snapshot
Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis
inferredcites →https://doi.org/10.1073/pnas.1016472108openalex-snapshot
Autophagosome targeting and membrane curvature sensing by Barkor/Atg14(L)
inferredcites →https://doi.org/10.1073/pnas.93.22.12304openalex-snapshot
Cytoplasm-to-vacuole targeting and autophagy employ the same machinery to deliver proteins to the yeast vacuole.
inferredcites →https://doi.org/10.1074/jbc.m111.250324openalex-snapshot
An Atg13 Protein-mediated Self-association of the Atg1 Protein Kinase Is Important for the Induction of Autophagy
inferredcites →https://doi.org/10.1074/jbc.m900573200openalex-snapshot
ULK1·ATG13·FIP200 Complex Mediates mTOR Signaling and Is Essential for Autophagy
inferredcites →https://doi.org/10.1083/jcb.150.3.461openalex-snapshot
Mutants Affecting the Structure of the Cortical Endoplasmic Reticulum in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1083/jcb.150.6.1507openalex-snapshot
Tor-Mediated Induction of Autophagy via an Apg1 Protein Kinase Complex
inferredcites →https://doi.org/10.1083/jcb.200712064openalex-snapshot
FIP200, a ULK-interacting protein, is required for autophagosome formation in mammalian cells
inferredcites →https://doi.org/10.1083/jcb.200901145openalex-snapshot
Segregation of sphingolipids and sterols during formation of secretory vesicles at the trans-Golgi network
inferredcites →https://doi.org/10.1083/jcb.200911141openalex-snapshot
Autophagy requires endoplasmic reticulum targeting of the PI3-kinase complex via Atg14L
inferredcites →https://doi.org/10.1083/jcb.200912089openalex-snapshot
An Atg9-containing compartment that functions in the early steps of autophagosome biogenesis
inferredcites →https://doi.org/10.1083/jcb.201202061openalex-snapshot
Atg9 vesicles are an important membrane source during early steps of autophagosome formation
inferredcites →https://doi.org/10.1091/mbc.e04-08-0669openalex-snapshot
Atg17 Functions in Cooperation with Atg1 and Atg13 in Yeast Autophagy
inferredcites →https://doi.org/10.1091/mbc.e07-08-0826openalex-snapshot
The Atg1 Kinase Complex Is Involved in the Regulation of Protein Recruitment to Initiate Sequestering Vesicle Formation for Nonspecific Autophagy inSaccharomyces cerevisiae
inferredcites →https://doi.org/10.1091/mbc.e07-10-1048openalex-snapshot
Organization of the Pre-autophagosomal Structure Responsible for Autophagosome Formation
inferredcites →https://doi.org/10.1091/mbc.e08-12-1248openalex-snapshot
Nutrient-dependent mTORC1 Association with the ULK1–Atg13–FIP200 Complex Required for Autophagy
inferredcites →https://doi.org/10.1091/mbc.e08-12-1249openalex-snapshot
ULK-Atg13-FIP200 Complexes Mediate mTOR Signaling to the Autophagy Machinery
inferredcites →https://doi.org/10.1093/nar/gkq461openalex-snapshot
FoXS: a web server for rapid computation and fitting of SAXS profiles
inferredcites →https://doi.org/10.1101/gad.2051011openalex-snapshot
Suppression of autophagy by FIP200 deletion inhibits mammary tumorigenesis
inferredcites →https://doi.org/10.1107/s0021889803012779openalex-snapshot
PRIMUS: a Windows PC-based system for small-angle scattering data analysis
inferredcites →https://doi.org/10.1107/s0021889892001663openalex-snapshot
Determination of the regularization parameter in indirect-transform methods using perceptual criteria
inferredcites →https://doi.org/10.1107/s0907444909012098openalex-snapshot
Decision-making in structure solution using Bayesian estimates of map quality: thePHENIX AutoSolwizard
inferredcites →https://doi.org/10.1107/s0907444910007493openalex-snapshot
Features and development of Coot
inferredcites →https://doi.org/10.1107/s0907444997011980openalex-snapshot
Miscellaneous Algorithms for Density Modification
inferredcites →https://doi.org/10.1107/s090744499801405xopenalex-snapshot
Efficient anisotropic refinement of macromolecular structures using FFT
inferredcites →https://doi.org/10.1111/j.1365-2443.2007.01050.xopenalex-snapshot
Hierarchy of Atg proteins in pre‐autophagosomal structure organization
inferredcites →https://doi.org/10.1111/j.1365-2443.2009.01299.xopenalex-snapshot
Atg17 recruits Atg9 to organize the pre‐autophagosomal structure
inferredcites →https://doi.org/10.1126/science.1092586openalex-snapshot
BAR Domains as Sensors of Membrane Curvature: The Amphiphysin BAR Structure
inferredcites →https://doi.org/10.1128/jb.173.6.2026-2034.1991openalex-snapshot
Phospholipid synthesis and lipid composition of subcellular membranes in the unicellular eukaryote Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1128/mcb.01082-08openalex-snapshot
Kinase-Inactivated ULK Proteins Inhibit Autophagy via Their Conserved C-Terminal Domains Using an Atg13-Independent Mechanism
inferredcites →https://doi.org/10.1146/annurev-cellbio-092910-154005openalex-snapshot
The Role of Atg Proteins in Autophagosome Formation
inferredcites →https://doi.org/10.1182/blood-2010-06-288589openalex-snapshot
FIP200 is required for the cell-autonomous maintenance of fetal hematopoietic stem cells
inferredcites →https://doi.org/10.4161/auto.3678openalex-snapshot
Methods for Monitoring Autophagy from Yeast to Human
inferredcites →https://doi.org/10.4161/auto.6.6.12709openalex-snapshot
Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Intricacies of Lipid Supply in Autophagic Membrane Expansion
inferred← citeshttps://doi.org/10.1002/1873-3468.14717openalex-snapshot
The role of the HORMA domain proteins ATG13 and ATG101 in initiating autophagosome biogenesis
inferred← citeshttps://doi.org/10.1002/1873-3468.14742openalex-snapshot
Structural view on autophagosome formation
inferred← citeshttps://doi.org/10.1002/2211-5463.12355openalex-snapshot
Biophysical characterization of Atg11, a scaffold protein essential for selective autophagy in yeast
inferred← citeshttps://doi.org/10.1002/arch.21718openalex-snapshot
Functional identification of Bombyx mori Atg13 in autophagy
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Predicting and validating a model of suppressor of IKKepsilon through biophysical characterization
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Molecular Machines Involved in Pexophagy
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Structural Basis of Autophagy Regulatory Proteins
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Autophagosomal Membrane Origin and Formation
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Atg1 family kinases in autophagy initiation
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Autophagy signal transduction by ATG proteins: from hierarchies to networks
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Anatomy of autophagy: from the beginning to the end
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The crystal structure of Atg18 reveals a new binding site for Atg2 in Saccharomyces cerevisiae
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Roles of mitophagy in cellular physiology and development
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Regulation of autophagy by amino acid availability in S. cerevisiae and mammalian cells
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Structural biology of the macroautophagy machinery
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Protein Quality Control System in Neurodegeneration: A Healing Company Hard to Beat but Failure is Fatal
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Neurons Specialize in Presynaptic Autophagy: A Perspective to Ameliorate Neurodegeneration
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Phosphorylation of Atg31 is required for autophagy
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Lipids and membrane-associated proteins in autophagy
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Multifaceted Housekeeping Functions of Autophagy
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The Molecular Mechanisms Underlying Autophagosome Formation in Yeast
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Unselective Disposal of Cellular Aggregates
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The Role of Atg9 in Yeast Autophagy
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Mechanisms of autophagy: the machinery of macroautophagy and points of control
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Membrane Trafficking in Autophagy
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Understanding autophagy: A molecular and physiological perspective
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Scaffold proteins in bulk and selective autophagy
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Dancing while self-eating: Protein intrinsic disorder in autophagy
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DNA damage-induced autophagy is regulated by inositol polyphosphate synthetases in Candida albicans
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Molecular and mesoscopic geometries in autophagosome generation. A review
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Up-to-date membrane biogenesis in the autophagosome formation
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The protein-vesicle network of autophagy
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Structure and function of the ULK1 complex in autophagy
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A Dimer to Bridge Early Autophagosomal Membranes
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Atomistic Autophagy: The Structures of Cellular Self-Digestion
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Multilayered Control of Protein Turnover by TORC1 and Atg1
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Dimerization-dependent membrane tethering by Atg23 is essential for yeast autophagy
inferred← citeshttps://doi.org/10.1016/j.celrep.2023.112807openalex-snapshot
Activation of autophagy depends on Atg1/Ulk1-mediated phosphorylation and inhibition of the Hsp90 chaperone machinery
inferred← citeshttps://doi.org/10.1016/j.celrep.2023.113051openalex-snapshot
Autophagy-mediated surveillance of Rim4-mRNA interaction safeguards programmed meiotic translation
inferred← citeshttps://doi.org/10.1016/j.chemphyslip.2018.11.001openalex-snapshot
Membrane-binding domains in autophagy
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WHAMM Directs the Arp2/3 Complex to the ER for Autophagosome Biogenesis through an Actin Comet Tail Mechanism
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The Atg17-Atg31-Atg29 Complex Coordinates with Atg11 to Recruit the Vam7 SNARE and Mediate Autophagosome-Vacuole Fusion
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miR-137 modulates coelomocytes autophagy by targeting Atg13 in the sea cucumber Apostichopus japonicus
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The Legionella Anti-autophagy Effector RavZ Targets the Autophagosome via PI3P- and Curvature-Sensing Motifs
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The Intrinsically Disordered Protein Atg13 Mediates Supramolecular Assembly of Autophagy Initiation Complexes
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Crosstalk between the Secretory and Autophagy Pathways Regulates Autophagosome Formation
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Autophagy in cancer development, immune evasion, and drug resistance
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Regulation of autophagy: Modulation of the size and number of autophagosomes
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Function of human WIPI proteins in autophagosomal rejuvenation of endomembranes?
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The human autophagy-initiating complexes ULK1C and PI3KC3-C1
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An overview of macroautophagy in yeast
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Mechanistically Dissecting Autophagy: Insights from In Vitro Reconstitution
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Regulation of Autophagy By Signaling Through the Atg1/ULK1 Complex
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Phospholipids in Autophagosome Formation and Fusion
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The Journey of the Autophagosome through Mammalian Cell Organelles and Membranes
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Structural Biology of the Cvt Pathway
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Sensing Membrane Curvature in Macroautophagy
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Lipids and Lipid-Binding Proteins in Selective Autophagy
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Mechanistic Insights into the Role of Atg11 in Selective Autophagy
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Recruitment and Activation of the ULK1/Atg1 Kinase Complex in Selective Autophagy
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Mechanisms of Autophagy in Metabolic Stress Response
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The PKA Signaling Pathway Regulates the Association of the Autophagy Initiation Complex With the Lipidation Machinery
inferred← citeshttps://doi.org/10.1016/j.jmb.2025.169134openalex-snapshot
Steroid Signaling in Autophagy
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Structural Insights into Autophagy in the AlphaFold Era
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Insights into autophagosome biogenesis from in vitro reconstitutions
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Receptor-Bound Targets of Selective Autophagy Use a Scaffold Protein to Activate the Atg1 Kinase
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Multilayered regulation of autophagy by the Atg1 kinase orchestrates spatial and temporal control of autophagosome formation
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A LRRK2-Dependent EndophilinA Phosphoswitch Is Critical for Macroautophagy at Presynaptic Terminals
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Next-generation electron microscopy in autophagy research
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Structural biology of the core autophagy machinery
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Autophagy in plant pathogenic fungi
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A Small Switch Has a Large Effect on Autophagy
inferred← citeshttps://doi.org/10.1016/j.str.2015.02.012openalex-snapshot
Solution Structure of the Atg1 Complex: Implications for the Architecture of the Phagophore Assembly Site
inferred← citeshttps://doi.org/10.1016/j.str.2015.07.011openalex-snapshot
Structure of the Human Atg13-Atg101 HORMA Heterodimer: an Interaction Hub within the ULK1 Complex
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The beginning of the end: how scaffolds nucleate autophagosome biogenesis
inferred← citeshttps://doi.org/10.1016/j.tibs.2016.08.001openalex-snapshot
Complex Relations Between Phospholipids, Autophagy, and Neutral Lipids
inferred← citeshttps://doi.org/10.1016/j.tplants.2018.05.002openalex-snapshot
Autophagosome Biogenesis and the Endoplasmic Reticulum: A Plant Perspective
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The yeast Saccharomyces cerevisiae: An overview of methods to study autophagy progression
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Guide to studying intrinsically disordered proteins by high-speed atomic force microscopy
inferred← citeshttps://doi.org/10.1038/cr.2013.159openalex-snapshot
A current perspective of autophagosome biogenesis
inferred← citeshttps://doi.org/10.1038/cr.2013.169openalex-snapshot
Historical landmarks of autophagy research
inferred← citeshttps://doi.org/10.1038/nature14147openalex-snapshot
ATG14 promotes membrane tethering and fusion of autophagosomes to endolysosomes
inferred← citeshttps://doi.org/10.1038/ncb2940openalex-snapshot
Lipidation of the LC3/GABARAP family of autophagy proteins relies on a membrane-curvature-sensing domain in Atg3
inferred← citeshttps://doi.org/10.1038/ncomms10338openalex-snapshot
The Atg1–kinase complex tethers Atg9-vesicles to initiate autophagy
inferred← citeshttps://doi.org/10.1038/ncomms12420openalex-snapshot
Autophagy initiation by ULK complex assembly on ER tubulovesicular regions marked by ATG9 vesicles
inferred← citeshttps://doi.org/10.1038/nrm3696openalex-snapshot
The autophagosome: origins unknown, biogenesis complex
inferred← citeshttps://doi.org/10.1038/nrneph.2014.201openalex-snapshot
Mechanisms and biological functions of autophagy in diseased and ageing kidneys
inferred← citeshttps://doi.org/10.1038/nsmb.2822openalex-snapshot
Structural basis of starvation-induced assembly of the autophagy initiation complex
inferred← citeshttps://doi.org/10.1038/nsmb.3036openalex-snapshot
Structure of the Atg101–Atg13 complex reveals essential roles of Atg101 in autophagy initiation
inferred← citeshttps://doi.org/10.1038/s41421-020-0161-3openalex-snapshot
Emerging roles of ATG proteins and membrane lipids in autophagosome formation
inferred← citeshttps://doi.org/10.1038/s41467-024-51402-wopenalex-snapshot
Palmitoylation of ULK1 by ZDHHC13 plays a crucial role in autophagy
inferred← citeshttps://doi.org/10.1038/s41556-021-00669-yopenalex-snapshot
Autophagosome biogenesis comes out of the black box
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Mechanisms governing autophagosome biogenesis
inferred← citeshttps://doi.org/10.1038/s41586-020-1977-6openalex-snapshot
Phase separation organizes the site of autophagosome formation
inferred← citeshttps://doi.org/10.1038/s41594-025-01557-xopenalex-snapshot
Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
inferred← citeshttps://doi.org/10.1038/s41594-026-01752-4openalex-snapshot
Core principles of autophagy initiation mechanisms
inferred← citeshttps://doi.org/10.1038/s44319-026-00931-0openalex-snapshot
LC3 forms functional nanoclusters on autophagosomes
inferred← citeshttps://doi.org/10.1042/bse0550001openalex-snapshot
Early signalling events of autophagy
inferred← citeshttps://doi.org/10.1042/bst20140247openalex-snapshot
Ypt1 and COPII vesicles act in autophagosome biogenesis and the early secretory pathway
inferred← citeshttps://doi.org/10.1042/bst20200130openalex-snapshot
In vitro reconstitution of autophagic processes
inferred← citeshttps://doi.org/10.1063/5.0117520openalex-snapshot
Complexes++: Efficient and versatile coarse-grained simulations of protein complexes and their dense solutions
inferred← citeshttps://doi.org/10.1073/pnas.1220306110openalex-snapshot
A HORMA domain in Atg13 mediates PI 3-kinase recruitment in autophagy
inferred← citeshttps://doi.org/10.1073/pnas.1300064110openalex-snapshot
Atg29 phosphorylation regulates coordination of the Atg17-Atg31-Atg29 complex with the Atg11 scaffold during autophagy initiation
inferred← citeshttps://doi.org/10.1073/pnas.1302337110openalex-snapshot
Ypt1 recruits the Atg1 kinase to the preautophagosomal structure
inferred← citeshttps://doi.org/10.1073/pnas.1316356110openalex-snapshot
The EM structure of the TRAPPIII complex leads to the identification of a requirement for COPII vesicles on the macroautophagy pathway
inferred← citeshttps://doi.org/10.1073/pnas.1407214111openalex-snapshot
Assembly and dynamics of the autophagy-initiating Atg1 complex
inferred← citeshttps://doi.org/10.1073/pnas.1603650113openalex-snapshot
Dynamics and architecture of the NRBF2-containing phosphatidylinositol 3-kinase complex I of autophagy
inferred← citeshttps://doi.org/10.1073/pnas.1811874115openalex-snapshot
Insights into autophagosome biogenesis from structural and biochemical analyses of the ATG2A-WIPI4 complex
inferred← citeshttps://doi.org/10.1073/pnas.2426476122openalex-snapshot
The autophagy-specific exocyst subcomplex contributes to phagophore assembly site integrity by promoting phagophore expansion
inferred← citeshttps://doi.org/10.1074/jbc.m113.498899openalex-snapshot
Double-membraned Liposomes Sculpted by Poliovirus 3AB Protein
inferred← citeshttps://doi.org/10.1074/jbc.m114.591065openalex-snapshot
Stearoyl-CoA Desaturase 1 Activity Is Required for Autophagosome Formation
inferred← citeshttps://doi.org/10.1074/jbc.m115.684233openalex-snapshot
The Thermotolerant Yeast Kluyveromyces marxianus Is a Useful Organism for Structural and Biochemical Studies of Autophagy
inferred← citeshttps://doi.org/10.1080/15548627.2015.1040972openalex-snapshot
Molecular interactions of theSaccharomyces cerevisiaeAtg1 complex provide insights into assembly and regulatory mechanisms
inferred← citeshttps://doi.org/10.1080/15548627.2015.1100356openalex-snapshot
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)
inferred← citeshttps://doi.org/10.1080/15548627.2016.1196316openalex-snapshot
Autophagy in Saccharomyces cerevisiae requires the monomeric GTP-binding proteins, Arl1 and Ypt6
inferred← citeshttps://doi.org/10.1080/15548627.2016.1277312openalex-snapshot
The molecular mechanism of Atg13 function in autophagy induction: What is hidden behind the data?
inferred← citeshttps://doi.org/10.1080/15548627.2017.1359381openalex-snapshot
Architecture of the ATG2B-WDR45 complex and an aromatic Y/HF motif crucial for complex formation
inferred← citeshttps://doi.org/10.1080/15548627.2017.1382782openalex-snapshot
Conserved and unique features of the fission yeast core Atg1 complex
inferred← citeshttps://doi.org/10.1080/15548627.2019.1596478openalex-snapshot
RAB2 regulates the formation of autophagosome and autolysosome in mammalian cells
inferred← citeshttps://doi.org/10.1080/15548627.2019.1648117openalex-snapshot
The carboxy terminus of yeast Atg13 binds phospholipid membrane via motifs that overlap with the Vac8-interacting domain
inferred← citeshttps://doi.org/10.1080/15548627.2020.1713643openalex-snapshot
Identification of the autophagy pathway in a mollusk bivalve, Crassostrea gigas
inferred← citeshttps://doi.org/10.1080/15548627.2020.1776474openalex-snapshot
Vac8 determines phagophore assembly site vacuolar localization during nitrogen starvation-induced autophagy
inferred← citeshttps://doi.org/10.1080/15548627.2020.1797280openalex-snapshot
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1
inferred← citeshttps://doi.org/10.1080/15548627.2024.2447206openalex-snapshot
The ER protein CANX (calnexin)-mediated autophagy protects against alzheimer disease
inferred← citeshttps://doi.org/10.1080/15548627.2024.2447207openalex-snapshot
Cargo hitchhiking autophagy – a hybrid autophagy pathway utilized in yeast
inferred← citeshttps://doi.org/10.1080/15548627.2025.2559683openalex-snapshot
Evolutionary diversification of the autophagy initiation complex: reduced Atg101 dependency and changes in Atg9 binding to Atg13
inferred← citeshttps://doi.org/10.1080/21505594.2019.1605803openalex-snapshot
The roles of apoptosis, autophagy and unfolded protein response in arbovirus, influenza virus, and HIV infections
inferred← citeshttps://doi.org/10.1080/27694127.2023.2236407openalex-snapshot
Neurodegenerative disease-associated inclusion bodies are cleared by selective autophagy in budding yeast
inferred← citeshttps://doi.org/10.1080/27694127.2025.2555835openalex-snapshot
Revisiting the evolution of the yeast Atg1 complex
inferred← citeshttps://doi.org/10.1083/jcb.201509076openalex-snapshot
The multifaceted roles of the HORMA domain in cellular signaling
inferred← citeshttps://doi.org/10.1083/jcb.201911047openalex-snapshot
ULK complex organization in autophagy by a C-shaped FIP200 N-terminal domain dimer
inferred← citeshttps://doi.org/10.1088/0953-8984/26/46/463103openalex-snapshot
Large, dynamic, multi-protein complexes: a challenge for structural biology
inferred← citeshttps://doi.org/10.1091/mbc.e13-07-0381openalex-snapshot
ER exit sites are physical and functional core autophagosome biogenesis components
inferred← citeshttps://doi.org/10.1091/mbc.e17-04-0258openalex-snapshot
The dynamic Atg13-free conformation of the Atg1 EAT domain is required for phagophore expansion
inferred← citeshttps://doi.org/10.1091/mbc.e25-06-0273openalex-snapshot
The Atg2-Atg18 complex interacts with the Atg1 complex to localize to the pre-autophagosomal structure in Saccharomyces cerevisiae
inferred← citeshttps://doi.org/10.1093/femsyr/foy010openalex-snapshot
Autophagy-related gene ATG13 is involved in control of xylose alcoholic fermentation in the thermotolerant methylotrophic yeast Ogataea polymorpha
inferred← citeshttps://doi.org/10.1093/jb/mvab017openalex-snapshot
Structural catalog of core Atg proteins opens new era of autophagy research
inferred← citeshttps://doi.org/10.1093/jb/mvad099openalex-snapshot
Molecular Mechanism of Autophagy, Cytoplasmic Zoning by Lipid Membranes
inferred← citeshttps://doi.org/10.1093/jxb/erx392openalex-snapshot
Lipids in membrane dynamics during autophagy in plants
inferred← citeshttps://doi.org/10.1101/043133openalex-snapshot
Septins are involved at the early stages of macroautophagy in S. cerevisiae
inferred← citeshttps://doi.org/10.1101/2023.10.18.562970openalex-snapshot
Evolutionary Rate Covariation is a reliable predictor of co-functional interactions but not necessarily physical interactions
inferred← citeshttps://doi.org/10.1101/2024.12.21.629869openalex-snapshot
LC3 forms functional nanocluster on autophagosome
inferred← citeshttps://doi.org/10.1101/2025.08.01.668046openalex-snapshot
A dual component system instructs membrane hydrolysis during the final stages of plant autophagy
inferred← citeshttps://doi.org/10.1105/tpc.113.120014openalex-snapshot
AUTOPHAGY-RELATED11 Plays a Critical Role in General Autophagy- and Senescence-Induced Mitophagy in Arabidopsis
inferred← citeshttps://doi.org/10.1111/febs.13356openalex-snapshot
Post‐translationally‐modified structures in the autophagy machinery: an integrative perspective
inferred← citeshttps://doi.org/10.1111/febs.13661openalex-snapshot
Autophagy in the test tube: In vitro reconstitution of aspects of autophagosome biogenesis
inferred← citeshttps://doi.org/10.1111/febs.15824openalex-snapshot
A guide to the regulation of selective autophagy receptors
inferred← citeshttps://doi.org/10.1146/annurev-biochem-060815-014556openalex-snapshot
Mammalian Autophagy: How Does It Work?
inferred← citeshttps://doi.org/10.1146/annurev-biochem-061516-044820openalex-snapshot
Mechanisms of Autophagy Initiation
inferred← citeshttps://doi.org/10.1146/annurev-biophys-060414-034248openalex-snapshot
Mechanisms of Autophagy
inferred← citeshttps://doi.org/10.1186/s12943-020-1138-4openalex-snapshot
Autophagy and autophagy-related proteins in cancer
inferred← citeshttps://doi.org/10.1186/s13046-018-0890-4openalex-snapshot
PHF8 upregulation contributes to autophagic degradation of E-cadherin, epithelial-mesenchymal transition and metastasis in hepatocellular carcinoma
inferred← citeshttps://doi.org/10.1186/s13046-018-0944-7openalex-snapshot
Correction to: PHF8 upregulation contributes to autophagic degradation of E-cadherin, epithelial-mesenchymal transition and metastasis in hepatocellular carcinoma
inferred← citeshttps://doi.org/10.1186/s13578-021-00736-9openalex-snapshot
The interplay of autophagy and oxidative stress in the pathogenesis and therapy of retinal degenerative diseases
inferred← citeshttps://doi.org/10.1242/bio.013979openalex-snapshot
Atg9 is required for intraluminal vesicles in amphisomes and autolysosomes
inferred← citeshttps://doi.org/10.1242/jcs.132415openalex-snapshot
Dynamic association of the ULK1 complex with omegasomes during autophagy induction
inferred← citeshttps://doi.org/10.1242/jcs.141036openalex-snapshot
Membrane dynamics in autophagosome biogenesis
inferred← citeshttps://doi.org/10.1242/jcs.158758openalex-snapshot
ERES: sites for autophagosome biogenesis and maturation?
inferred← citeshttps://doi.org/10.1242/jcs.177071openalex-snapshot
The Ccl1–Kin28 kinase complex regulates autophagy under nitrogen starvation
inferred← citeshttps://doi.org/10.1242/jcs.223792openalex-snapshot
Reconstruction of destruction – in vitro reconstitution methods in autophagy research
inferred← citeshttps://doi.org/10.1242/jcs.233742openalex-snapshot
The evolution of autophagy proteins – diversification in eukaryotes and potential ancestors in prokaryotes
inferred← citeshttps://doi.org/10.1247/csf.15013openalex-snapshot
Atg101: Not Just an Accessory Subunit in the Autophagy-initiation Complex
inferred← citeshttps://doi.org/10.12688/f1000research.22111.1openalex-snapshot
Recent advances in the understanding of autophagosome biogenesis
inferred← citeshttps://doi.org/10.1371/journal.pbio.2007044openalex-snapshot
CRISPR screening using an expanded toolkit of autophagy reporters identifies TMEM41B as a novel autophagy factor
inferred← citeshttps://doi.org/10.1371/journal.pbio.3000377openalex-snapshot
Atg11 tethers Atg9 vesicles to initiate selective autophagy
inferred← citeshttps://doi.org/10.1371/journal.pbio.3000718openalex-snapshot
Mitotic phosphorylation of the ULK complex regulates cell cycle progression
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1005817openalex-snapshot
Scaffolding the cup-shaped double membrane in autophagy
inferred← citeshttps://doi.org/10.1371/journal.pone.0067409openalex-snapshot
Crystal Structures of the Sec1/Munc18 (SM) Protein Vps33, Alone and Bound to the Homotypic Fusion and Vacuolar Protein Sorting (HOPS) Subunit Vps16*
inferred← citeshttps://doi.org/10.1515/tnsci-2017-0008openalex-snapshot
Autophagy, endoplasmic reticulum stress and the unfolded protein response in intracerebral hemorrhage
inferred← citeshttps://doi.org/10.15252/embj.201695189openalex-snapshot
Autophagosome formation is initiated at phosphatidylinositol synthase‐enriched ER subdomains
inferred← citeshttps://doi.org/10.15252/embj.201898960openalex-snapshot
Parkinson's disease: convergence on synaptic homeostasis
inferred← citeshttps://doi.org/10.15252/embj.2022112814openalex-snapshot
TOR‐mediated Ypt1 phosphorylation regulates autophagy initiation complex assembly
inferred← citeshttps://doi.org/10.15252/embr.201744559openalex-snapshot
Remodeling of ER‐exit sites initiates a membrane supply pathway for autophagosome biogenesis
inferred← citeshttps://doi.org/10.1534/genetics.112.149013openalex-snapshot
Autophagic Processes in Yeast: Mechanism, Machinery and Regulation
inferred← citeshttps://doi.org/10.15698/cst2020.07.225openalex-snapshot
The role of lipids in autophagy and its implication in neurodegeneration
inferred← citeshttps://doi.org/10.2139/ssrn.4309041openalex-snapshot
Autophagy Inspects Rim4-mRNA Interaction to Safeguard Programmed Meiotic Translation
inferred← citeshttps://doi.org/10.2147/rrbc.s57405openalex-snapshot
The autophagosome: current understanding of formation and maturation
inferred← citeshttps://doi.org/10.2198/electroph.61.58openalex-snapshot
Multimeric self-assembly of autophagy initiation complexes regulated by dephosphorylation of Atg13
inferred← citeshttps://doi.org/10.3389/fcell.2021.775364openalex-snapshot
Mapping Critical Residues in ATG11’s Coiled-Coil 2 Domain that Block Multiple Interactions and Disrupt Selective Autophagy
inferred← citeshttps://doi.org/10.3389/fcell.2022.910640openalex-snapshot
Phase Separation in Regulation of Autophagy
inferred← citeshttps://doi.org/10.3389/fimmu.2013.00301openalex-snapshot
Intestinal Epithelium and Autophagy: Partners in Gut Homeostasis
inferred← citeshttps://doi.org/10.3389/fimmu.2013.00361openalex-snapshot
The Interplay between NLRs and Autophagy in Immunity and Inflammation
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1019543openalex-snapshot
The crucial role of the regulatory mechanism of the Atg1/ULK1 complex in fungi
inferred← citeshttps://doi.org/10.3389/fonc.2021.632956openalex-snapshot
Mechanobiology of Autophagy: The Unexplored Side of Cancer
inferred← citeshttps://doi.org/10.3389/fphys.2015.00180openalex-snapshot
Cloning, expression analysis, and RNA interference study of a HORMA domain containing autophagy-related gene 13 (ATG13) from the coleopteran beetle, Tenebrio molitor
inferred← citeshttps://doi.org/10.3389/fpls.2018.01837openalex-snapshot
The Multivesicular Body and Autophagosome Pathways in Plants
inferred← citeshttps://doi.org/10.3389/fpls.2020.00565openalex-snapshot
Recent Advances in Membrane Shaping for Plant Autophagosome Biogenesis
inferred← citeshttps://doi.org/10.3389/fpls.2022.867486openalex-snapshot
Autophagy as a Survival Strategy for Eukaryotic Microbes Living in the Phyllosphere
inferred← citeshttps://doi.org/10.3390/biom7030052openalex-snapshot
Regulation of Autophagy through TORC1 and mTORC1
inferred← citeshttps://doi.org/10.3390/cells10061272openalex-snapshot
How Lipids Contribute to Autophagosome Biogenesis, a Critical Process in Plant Responses to Stresses
inferred← citeshttps://doi.org/10.3390/cells10113124openalex-snapshot
Activation Mechanisms of the VPS34 Complexes
inferred← citeshttps://doi.org/10.3390/cells11071086openalex-snapshot
Fission Yeast Autophagy Machinery
inferred← citeshttps://doi.org/10.3390/cells11121876openalex-snapshot
Characterization of Protein–Membrane Interactions in Yeast Autophagy
inferred← citeshttps://doi.org/10.3390/cells12081132openalex-snapshot
Membrane Curvature: The Inseparable Companion of Autophagy
inferred← citeshttps://doi.org/10.3390/cells5020024openalex-snapshot
Advances in Autophagy Regulatory Mechanisms
inferred← citeshttps://doi.org/10.3390/cells8121627openalex-snapshot
Structural Biology and Electron Microscopy of the Autophagy Molecular Machinery
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