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Autophagosome formation is initiated at phosphatidylinositol synthase‐enriched ER subdomains

https://doi.org/10.15252/embj.201695189

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ceb.2016.02.011openalex-snapshot

Signalling at membrane contact sites: two membranes come together to handle second messengers

inferredcites →https://doi.org/10.1016/j.cell.2012.11.028openalex-snapshot

Architecture of the Atg17 Complex as a Scaffold for Autophagosome Biogenesis

inferredcites →https://doi.org/10.1016/j.cub.2014.02.008openalex-snapshot

Neutral Lipid Stores and Lipase PNPLA5 Contribute to Autophagosome Biogenesis

inferredcites →https://doi.org/10.1016/j.devcel.2011.09.005openalex-snapshot

A Highly Dynamic ER-Derived Phosphatidylinositol-Synthesizing Organelle Supplies Phosphoinositides to Cellular Membranes

inferredcites →https://doi.org/10.1016/j.febslet.2006.04.008openalex-snapshot

Generation of cell lines with tetracycline‐regulated autophagy and a role for autophagy in controlling cell size

inferredcites →https://doi.org/10.1016/j.molcel.2013.12.011openalex-snapshot

Early Steps in Autophagy Depend on Direct Phosphorylation of Atg9 by the Atg1 Kinase

inferredcites →https://doi.org/10.1016/j.molcel.2014.05.021openalex-snapshot

WIPI2 Links LC3 Conjugation with PI3P, Autophagosome Formation, and Pathogen Clearance by Recruiting Atg12–5-16L1

inferredcites →https://doi.org/10.1038/cdd.2013.174openalex-snapshot

Phospholipase D-mediated autophagic regulation is a potential target for cancer therapy

inferredcites →https://doi.org/10.1038/cdd.2014.30openalex-snapshot

Phospholipase D1 regulates autophagic flux and clearance of α-synuclein aggregates

inferredcites →https://doi.org/10.1038/cr.2016.146openalex-snapshot

Regulation of mATG9 trafficking by Src- and ULK1-mediated phosphorylation in basal and starvation-induced autophagy

inferredcites →https://doi.org/10.1038/embor.2013.6openalex-snapshot

FIP200 regulates targeting of Atg16L1 to the isolation membrane

inferredcites →https://doi.org/10.1038/nature11910openalex-snapshot

Autophagosomes form at ER–mitochondria contact sites

inferredcites →https://doi.org/10.1038/ncb1007-1102openalex-snapshot

Autophagosome formation: core machinery and adaptations

inferredcites →https://doi.org/10.1038/ncb1991openalex-snapshot

A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation

inferredcites →https://doi.org/10.1038/ncb2647openalex-snapshot

Rab10 GTPase regulates ER dynamics and morphology

inferredcites →https://doi.org/10.1038/ncb2757openalex-snapshot

ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase

inferredcites →https://doi.org/10.1038/ncomms10338openalex-snapshot

The Atg1–kinase complex tethers Atg9-vesicles to initiate autophagy

inferredcites →https://doi.org/10.1038/ncomms1144openalex-snapshot

The phospholipase D1 pathway modulates macroautophagy

inferredcites →https://doi.org/10.1038/ncomms13889openalex-snapshot

HS1BP3 negatively regulates autophagy by modulation of phosphatidic acid levels

inferredcites →https://doi.org/10.1038/nrm.2015.8openalex-snapshot

Structure and function of ER membrane contact sites with other organelles

inferredcites →https://doi.org/10.1038/nsmb.2475openalex-snapshot

Interaction between FIP200 and ATG16L1 distinguishes ULK1 complex–dependent and –independent autophagy

inferredcites →https://doi.org/10.1038/nsmb.3036openalex-snapshot

Structure of the Atg101–Atg13 complex reveals essential roles of Atg101 in autophagy initiation

inferredcites →https://doi.org/10.1038/srep02568openalex-snapshot

Involvement of A20 in the molecular switch that activates the non-canonical NF-кB pathway

inferredcites →https://doi.org/10.1073/pnas.0911267106openalex-snapshot

Atg9a controls dsDNA-driven dynamic translocation of STING and the innate immune response

inferredcites →https://doi.org/10.1073/pnas.1107969108openalex-snapshot

Ammonia-induced autophagy is independent of ULK1/ULK2 kinases

inferredcites →https://doi.org/10.1074/jbc.m112.378109openalex-snapshot

ATG8 Family Proteins Act as Scaffolds for Assembly of the ULK Complex

inferredcites →https://doi.org/10.1074/jbc.m112.411454openalex-snapshot

Atg9 Vesicles Recruit Vesicle-tethering Proteins Trs85 and Ypt1 to the Autophagosome Formation Site

inferredcites →https://doi.org/10.1074/jbc.r800046200openalex-snapshot

Acyl-CoA:Lysophospholipid Acyltransferases

inferredcites →https://doi.org/10.1080/15548627.2016.1140293openalex-snapshot

The ULK1 complex mediates MTORC1 signaling to the autophagy initiation machinery via binding and phosphorylating ATG14

inferredcites →https://doi.org/10.1083/jcb.152.3.519openalex-snapshot

Two Distinct Vps34 Phosphatidylinositol 3–Kinase Complexes Function in Autophagy and Carboxypeptidase Y Sorting in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1083/jcb.200604129openalex-snapshot

Role of FIP200 in cardiac and liver development and its regulation of TNFα and TSC–mTOR signaling pathways

inferredcites →https://doi.org/10.1083/jcb.200803137openalex-snapshot

Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum

inferredcites →https://doi.org/10.1083/jcb.201111079openalex-snapshot

TBC1D14 regulates autophagosome formation via Rab11- and ULK1-positive recycling endosomes

inferredcites →https://doi.org/10.1083/jcb.201202061openalex-snapshot

Atg9 vesicles are an important membrane source during early steps of autophagosome formation

inferredcites →https://doi.org/10.1083/jcb.201304188openalex-snapshot

Recruitment of the autophagic machinery to endosomes during infection is mediated by ubiquitin

inferredcites →https://doi.org/10.1083/jcb.201311051openalex-snapshot

Biogenesis of the multifunctional lipid droplet: Lipids, proteins, and sites

inferredcites →https://doi.org/10.1083/jcb.201401126openalex-snapshot

Bridging the gap: Membrane contact sites in signaling, metabolism, and organelle dynamics

inferredcites →https://doi.org/10.1091/mbc.e08-01-0080openalex-snapshot

Beclin 1 Forms Two Distinct Phosphatidylinositol 3-Kinase Complexes with Mammalian Atg14 and UVRAG

inferredcites →https://doi.org/10.1091/mbc.e08-03-0309openalex-snapshot

The Atg8 Conjugation System Is Indispensable for Proper Development of Autophagic Isolation Membranes in Mice

inferredcites →https://doi.org/10.1091/mbc.e08-12-1248openalex-snapshot

Nutrient-dependent mTORC1 Association with the ULK1–Atg13–FIP200 Complex Required for Autophagy

inferredcites →https://doi.org/10.1091/mbc.e10-11-0893openalex-snapshot

The LC3 recruitment mechanism is separate from Atg9L1-dependent membrane formation in the autophagic response againstSalmonella

inferredcites →https://doi.org/10.1091/mbc.e11-09-0746openalex-snapshot

Dynamic and transient interactions of Atg9 with autophagosomes, but not membrane integration, are required for autophagy

inferredcites →https://doi.org/10.1091/mbc.e13-07-0381openalex-snapshot

ER exit sites are physical and functional core autophagosome biogenesis components

inferredcites →https://doi.org/10.1111/j.1365-2443.2007.01050.xopenalex-snapshot

Hierarchy of Atg proteins in pre‐autophagosomal structure organization

inferredcites →https://doi.org/10.1128/mcb.01005-15openalex-snapshot

Atg13 Is Essential for Autophagy and Cardiac Development in Mice

inferredcites →https://doi.org/10.1128/mcb.01082-08openalex-snapshot

Kinase-Inactivated ULK Proteins Inhibit Autophagy via Their Conserved C-Terminal Domains Using an Atg13-Independent Mechanism

inferredcites →https://doi.org/10.1128/mcb.01327-13openalex-snapshot

A Cluster of Thin Tubular Structures Mediates Transformation of the Endoplasmic Reticulum to Autophagic Isolation Membrane

inferredcites →https://doi.org/10.1146/annurev-biochem-060713-035307openalex-snapshot

Topological Regulation of Lipid Balance in Cells

inferredcites →https://doi.org/10.1146/annurev-cellbio-092910-154005openalex-snapshot

The Role of Atg Proteins in Autophagosome Formation

inferredcites →https://doi.org/10.1159/000350326openalex-snapshot

Antimicrobial Autophagy: A Conserved Innate Immune Response in Drosophila

inferredcites →https://doi.org/10.1194/jlr.d001503openalex-snapshot

An extremely simple method for extraction of lysophospholipids and phospholipids from blood samples

inferredcites →https://doi.org/10.1242/jcs.094110openalex-snapshot

Structures containing Atg9A and the ULK1 complex independently target depolarized mitochondria at initial stages of Parkin-mediated mitophagy

inferredcites →https://doi.org/10.1242/jcs.122960openalex-snapshot

Fine mapping of autophagy-related proteins during autophagosome formation in Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1242/jcs.132415openalex-snapshot

Dynamic association of the ULK1 complex with omegasomes during autophagy induction

inferredcites →https://doi.org/10.1242/jcs.156034openalex-snapshot

Ultrastructural analysis of autophagosome organization using mammalian autophagy-deficient cells

inferredcites →https://doi.org/10.15252/embj.201591481openalex-snapshot

ER–endosome contact sites: molecular compositions and functions

inferredcites →https://doi.org/10.15252/embj.201592695openalex-snapshot

TBC1D14 regulates autophagy via the TRAPP complex and ATG9 traffic

inferredcites →https://doi.org/10.15252/embj.201695189openalex-snapshot

Autophagosome formation is initiated at phosphatidylinositol synthase‐enriched ER subdomains

inferredcites →https://doi.org/10.4161/auto.25529openalex-snapshot

Temporal analysis of recruitment of mammalian ATG proteins to the autophagosome formation site

inferredcites →https://doi.org/10.4161/auto.4590openalex-snapshot

Sequestration Revisited: Integrating Traditional Electron Microscopy, De Novo Assembly and New Results

inferredcites →https://doi.org/10.4161/auto.5.7.9296openalex-snapshot

Atg101, a novel mammalian autophagy protein interacting with Atg13

inferredcites →https://doi.org/10.4161/auto.5.8.10274openalex-snapshot

3D tomography reveals connections between the phagophore and endoplasmic reticulum

inferredcites →https://doi.org/10.4161/auto.6.4.11863openalex-snapshot

Mammalian Atg18 (WIPI2) localizes to omegasome-anchored phagophores and positively regulates LC3 lipidation

inferredcites →https://doi.org/10.4161/auto.6.6.12709openalex-snapshot

Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins

inferredcites →https://doi.org/10.7554/elife.00947openalex-snapshot

The ER–Golgi intermediate compartment is a key membrane source for the LC3 lipidation step of autophagosome biogenesis

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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C9orf72-Associated Dipeptide Repeat Expansions Perturb ER-Golgi Vesicular Trafficking, Inducing Golgi Fragmentation and ER Stress, in ALS/FTD

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Hypoxia-associated autophagy flux dysregulation in human cancers

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A new type of ERGIC–ERES membrane contact mediated by TMED9 and SEC12 is required for autophagosome biogenesis

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Long-term autophagy is sustained by activation of CCTβ3 on lipid droplets

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inferred← citeshttps://doi.org/10.1038/s41467-022-33933-2openalex-snapshot

The cholesterol transport protein GRAMD1C regulates autophagy initiation and mitochondrial bioenergetics

inferred← citeshttps://doi.org/10.1038/s41467-023-37016-8openalex-snapshot

De novo lipogenesis fuels adipocyte autophagosome and lysosome membrane dynamics

inferred← citeshttps://doi.org/10.1038/s41467-026-72498-2openalex-snapshot

Small heat shock and J-domain proteins direct defense against areca palm velarivirus 1 by degrading coat protein via autophagy

inferred← citeshttps://doi.org/10.1038/s41467-026-77368-5openalex-snapshot

A lipid transfer-dependent feedback loop activates ATG9A compartments in autophagy initiation

inferred← citeshttps://doi.org/10.1038/s41556-018-0092-5openalex-snapshot

A brief history of autophagy from cell biology to physiology and disease

inferred← citeshttps://doi.org/10.1038/s41556-021-00669-yopenalex-snapshot

Autophagosome biogenesis comes out of the black box

inferred← citeshttps://doi.org/10.1038/s41556-024-01572-yopenalex-snapshot

Phase separation of initiation hubs on cargo is a trigger switch for selective autophagy

inferred← citeshttps://doi.org/10.1038/s41580-018-0003-4openalex-snapshot

Mechanism and medical implications of mammalian autophagy

inferred← citeshttps://doi.org/10.1038/s41580-019-0180-9openalex-snapshot

The functional universe of membrane contact sites

inferred← citeshttps://doi.org/10.1038/s41580-020-0241-0openalex-snapshot

Mechanisms governing autophagosome biogenesis

inferred← citeshttps://doi.org/10.1038/s41594-020-00520-2openalex-snapshot

Structure, lipid scrambling activity and role in autophagosome formation of ATG9A

inferred← citeshttps://doi.org/10.1038/s41594-026-01752-4openalex-snapshot

Core principles of autophagy initiation mechanisms

inferred← citeshttps://doi.org/10.1038/s41598-019-45185-0openalex-snapshot

Enzymatic fluorometric assays for quantifying all major phospholipid classes in cells and intracellular organelles

inferred← citeshttps://doi.org/10.1038/s42004-022-00676-6openalex-snapshot

Supercritical fluid chromatography-mass spectrometry enables simultaneous measurement of all phosphoinositide regioisomers

inferred← citeshttps://doi.org/10.1038/s43018-023-00546-7openalex-snapshot

Impact of context-dependent autophagy states on tumor progression

inferred← citeshttps://doi.org/10.1042/bst20170128openalex-snapshot

Autophagy in the context of the cellular membrane-trafficking system: the enigma of Atg9 vesicles

inferred← citeshttps://doi.org/10.1042/bst20190205openalex-snapshot

How is the acyl chain composition of phosphoinositides created and does it matter?

inferred← citeshttps://doi.org/10.1042/bst20210819openalex-snapshot

Molecular regulation of autophagosome formation

inferred← citeshttps://doi.org/10.1055/s-0037-1608652openalex-snapshot

Congenital Disorders of Autophagy: What a Pediatric Neurologist Should Know

inferred← citeshttps://doi.org/10.1080/15548627.2020.1732713openalex-snapshot

As (and when) you like it: on-demand phospholipid synthesis drives phagophore expansion during autophagy

inferred← citeshttps://doi.org/10.1080/15548627.2020.1763019openalex-snapshot

An integrative multi-omics approach uncovers the regulatory role of CDK7 and CDK4 in autophagy activation induced by silica nanoparticles

inferred← citeshttps://doi.org/10.1080/15548627.2020.1817279openalex-snapshot

PDPK1 regulates autophagosome biogenesis by binding to PIK3C3

inferred← citeshttps://doi.org/10.1080/15548627.2021.1909407openalex-snapshot

Phosphoregulation of the autophagy machinery by kinases and phosphatases

inferred← citeshttps://doi.org/10.1080/15548627.2021.1953262openalex-snapshot

A Dictyostelium model for BPAN disease reveals a functional relationship between the WDR45/WIPI4 homolog Wdr45l and Vmp1 in the regulation of autophagy-associated PtdIns3P and ER stress

inferred← citeshttps://doi.org/10.1080/15548627.2021.1969634openalex-snapshot

Monitoring basal autophagy in the retina utilizing CAG-mRFP-EGFP-MAP1LC3B reporter mouse: technical and biological considerations

inferred← citeshttps://doi.org/10.1080/15548627.2022.2136340openalex-snapshot

Atg9 interactions via its transmembrane domains are required for phagophore expansion during autophagy

inferred← citeshttps://doi.org/10.1080/15548627.2023.2249750openalex-snapshot

Disrupted endoplasmic reticulum-mediated autophagosomal biogenesis in a Drosophila model of C9-ALS-FTD

inferred← citeshttps://doi.org/10.1080/15548627.2023.2269028openalex-snapshot

A conserved requirement for RME-8/DNAJC13 in neuronal autophagic lysosome reformation

inferred← citeshttps://doi.org/10.1080/15548627.2024.2447206openalex-snapshot

The ER protein CANX (calnexin)-mediated autophagy protects against alzheimer disease

inferred← citeshttps://doi.org/10.1080/15548627.2025.2509376openalex-snapshot

S-palmitoylation coordinates the trafficking of ATG9A to mediate autophagy initiation

inferred← citeshttps://doi.org/10.1080/15548627.2026.2655834openalex-snapshot

Phase separation of C19orf12 regulates BNIP3 protein quality control and maintains neuronal mitophagy

inferred← citeshttps://doi.org/10.1080/27694127.2025.2541597openalex-snapshot

Biarylacetamides: a novel class of late-stage autophagy inhibitors

inferred← citeshttps://doi.org/10.1083/jcb.201804132openalex-snapshot

Genome-wide CRISPR screen identifies TMEM41B as a gene required for autophagosome formation

inferred← citeshttps://doi.org/10.1083/jcb.201903127openalex-snapshot

ERdj8 governs the size of autophagosomes during the formation process

inferred← citeshttps://doi.org/10.1083/jcb.201904063openalex-snapshot

ATG9 raises the BAR for PI4P in autophagy

inferred← citeshttps://doi.org/10.1083/jcb.202002085openalex-snapshot

Autophagosome biogenesis: From membrane growth to closure

inferred← citeshttps://doi.org/10.1083/jcb.202009194openalex-snapshot

Transmembrane phospholipid translocation mediated by Atg9 is involved in autophagosome formation

inferred← citeshttps://doi.org/10.1083/jcb.202012091openalex-snapshot

Atlastin 2/3 regulate ER targeting of the ULK1 complex to initiate autophagy

inferred← citeshttps://doi.org/10.1083/jcb.202203083openalex-snapshot

A guide to membrane atg8ylation and autophagy with reflections on immunity

inferred← citeshttps://doi.org/10.1083/jcb.202309057openalex-snapshot

Faa1 membrane binding drives positive feedback in autophagosome biogenesis via fatty acid activation

inferred← citeshttps://doi.org/10.1083/jcb.202404047openalex-snapshot

ATG9A facilitates the closure of mammalian autophagosomes

inferred← citeshttps://doi.org/10.1083/jcb.202601047openalex-snapshot

MOSPD3 mediates the ER recruitment of ATG2A to promote autophagy

inferred← citeshttps://doi.org/10.1084/jem.20230367openalex-snapshot

ARL6IP1 gene delivery reduces neuroinflammation and neurodegenerative pathology in hereditary spastic paraplegia model

inferred← citeshttps://doi.org/10.1089/ars.2018.7626openalex-snapshot

Autophagy in Adipose Tissue Physiology and Pathophysiology

inferred← citeshttps://doi.org/10.1091/mbc.e21-06-0295openalex-snapshot

RUSC2 and WDR47 oppositely regulate kinesin–1-dependent distribution of ATG9A to the cell periphery

inferred← citeshttps://doi.org/10.1091/mbc.e24-03-0101openalex-snapshot

Ubiquitin-mediated recruitment of the ATG9A-ATG2 lipid transfer complex drives clearance of phosphorylated p62 aggregates

inferred← citeshttps://doi.org/10.1093/hr/uhaf358openalex-snapshot

Targeting and activation of BraATG8i by an RXLR effector DM459 contribute to downy mildew resistance in Brassica rapa

inferred← citeshttps://doi.org/10.1093/jxb/erx392openalex-snapshot

Lipids in membrane dynamics during autophagy in plants

inferred← citeshttps://doi.org/10.1101/2021.08.04.455032openalex-snapshot

GRAMD1C regulates autophagy initiation and mitochondrial bioenergetics through ER-mitochondria cholesterol transport

inferred← citeshttps://doi.org/10.1101/2022.05.25.493413openalex-snapshot

De novo lipogenesis fuels adipocyte autophagosome membrane dynamics

inferred← citeshttps://doi.org/10.1101/2023.02.27.530319openalex-snapshot

A Conserved Requirement for RME-8/DNAJC13 in Neuronal Autolysosome Reformation

inferred← citeshttps://doi.org/10.1101/2023.08.18.553817openalex-snapshot

TAX1BP1 recruits ATG9 vesicles through SCAMP3 binding

inferred← citeshttps://doi.org/10.1101/2023.11.13.566859openalex-snapshot

Evolutionary arms race between SARS-CoV-2 and interferon signaling via dynamic interaction with autophagy

inferred← citeshttps://doi.org/10.1101/2023.11.28.569058openalex-snapshot

The formation of ubiquitin rich condensates triggers recruitment of the ATG9A lipid transfer complex to initiate basal autophagy

inferred← citeshttps://doi.org/10.1101/712828openalex-snapshot

Super-resolution microscopy unveils FIP200-scaffolded, cup-shaped organization of mammalian autophagic initiation machinery

inferred← citeshttps://doi.org/10.1111/nph.15913openalex-snapshot

Proteomic and lipidomic analyses of the Arabidopsis atg5 autophagy mutant reveal major changes in endoplasmic reticulum and peroxisome metabolisms and in lipid composition

inferred← citeshttps://doi.org/10.1111/tra.12581openalex-snapshot

Vacuole membrane protein 1 marks endoplasmic reticulum subdomains enriched in phospholipid synthesizing enzymes and is required for phosphoinositide distribution

inferred← citeshttps://doi.org/10.1126/sciadv.adh1281openalex-snapshot

Unique amphipathic α helix drives membrane insertion and enzymatic activity of ATG3

inferred← citeshttps://doi.org/10.1126/sciadv.adr2450openalex-snapshot

Pellino 3 E3 ligase promotes starvation-induced autophagy to prevent hepatic steatosis

inferred← citeshttps://doi.org/10.1126/science.aaz7714openalex-snapshot

Reconstitution of autophagosome nucleation defines Atg9 vesicles as seeds for membrane formation

inferred← citeshttps://doi.org/10.1146/annurev-biochem-083024-122821openalex-snapshot

Lipid Dynamics at Membrane Contact Sites

inferred← citeshttps://doi.org/10.1146/annurev-cellbio-120219-035530openalex-snapshot

Mechanisms of Selective Autophagy

inferred← citeshttps://doi.org/10.1146/annurev-virology-010220-054709openalex-snapshot

Autophagy in Plant-Virus Interactions

inferred← citeshttps://doi.org/10.1155/2022/6459585openalex-snapshot

Mitochondrial‐Endoplasmic Reticulum Communication‐Mediated Oxidative Stress and Autophagy

inferred← citeshttps://doi.org/10.1177/25152564231162495openalex-snapshot

How Membrane Contact Sites Shape the Phagophore

inferred← citeshttps://doi.org/10.1177/25152564231183898openalex-snapshot

The Organization and Function of the Phagophore-ER Membrane Contact Sites

inferred← citeshttps://doi.org/10.1177/25152564261451671openalex-snapshot

ER-driven Contact Sites in Autophagosome Biogenesis Sequence

inferred← citeshttps://doi.org/10.1186/s11658-026-00897-wopenalex-snapshot

Restoration of lysosomal membrane integrity in cell models of Pompe disease depends on fatty acid synthase and its product palmitic acid

inferred← citeshttps://doi.org/10.1186/s12915-020-00837-wopenalex-snapshot

Excess diacylglycerol at the endoplasmic reticulum disrupts endomembrane homeostasis and autophagy

inferred← citeshttps://doi.org/10.1186/s12929-020-00691-6openalex-snapshot

Autophagosome formation in relation to the endoplasmic reticulum

inferred← citeshttps://doi.org/10.1186/s40035-026-00555-3openalex-snapshot

The emerging role and therapeutic targeting of autophagy-lysosome pathway in the pathogenesis of Parkinson’s disease

inferred← citeshttps://doi.org/10.1242/jcs.221747openalex-snapshot

Nε-lysine acetylation in the endoplasmic reticulum – a novel cellular mechanism that regulates proteostasis and autophagy

inferred← citeshttps://doi.org/10.1242/jcs.259634openalex-snapshot

Mitochondria-associated niches in health and disease

inferred← citeshttps://doi.org/10.1242/jcs.260631openalex-snapshot

Regulation of autophagy gene expression and its implications in cancer

inferred← citeshttps://doi.org/10.1242/jcs.263677openalex-snapshot

Different roles of ACSL3 and ACSL4 in autophagosome formation

inferred← citeshttps://doi.org/10.12688/f1000research.22111.1openalex-snapshot

Recent advances in the understanding of autophagosome biogenesis

inferred← citeshttps://doi.org/10.1371/journal.pbio.2007044openalex-snapshot

CRISPR screening using an expanded toolkit of autophagy reporters identifies TMEM41B as a novel autophagy factor

inferred← citeshttps://doi.org/10.15252/embj.2019103563openalex-snapshot

TFG binds LC3C to regulate ULK1 localization and autophagosome formation

inferred← citeshttps://doi.org/10.15252/embj.2022110771openalex-snapshot

Phospholipid imbalance impairs autophagosome completion

inferred← citeshttps://doi.org/10.15252/embj.2022112845openalex-snapshot

Mammalian ATG8 proteins maintain autophagosomal membrane integrity through ESCRTs

inferred← citeshttps://doi.org/10.15252/embr.202051136openalex-snapshot

BioID reveals an ATG9A interaction with ATG13-ATG101 in the degradation of p62/SQSTM1-ubiquitin clusters

inferred← citeshttps://doi.org/10.21248/gups.67332openalex-snapshot

Minimized combinatorial CRISPR screens identify genetic interactions in autophagy

inferred← citeshttps://doi.org/10.22038/ijbms.2024.79405.17201openalex-snapshot

Targeting autophagy for breast cancer prevention and therapy: From classical methods to phytochemical agents.

inferred← citeshttps://doi.org/10.3389/fcell.2018.00146openalex-snapshot

Initial Steps in Mammalian Autophagosome Biogenesis

inferred← citeshttps://doi.org/10.3389/fcell.2020.00090openalex-snapshot

Reticulon Homology Domain-Containing Proteins and ER-Phagy

inferred← citeshttps://doi.org/10.3389/fcell.2020.00343openalex-snapshot

Endoplasmic Reticulum Membrane and Contact Site Dynamics in Autophagy Regulation and Stress Response

inferred← citeshttps://doi.org/10.3389/fcell.2020.615856openalex-snapshot

Lipid Metabolism at Membrane Contacts: Dynamics and Functions Beyond Lipid Homeostasis

inferred← citeshttps://doi.org/10.3389/fcell.2021.737071openalex-snapshot

The WIPI Gene Family and Neurodegenerative Diseases: Insights From Yeast and Dictyostelium Models

inferred← citeshttps://doi.org/10.3389/fcell.2023.1149409openalex-snapshot

Autophagy, innate immunity, and cardiac disease

inferred← citeshttps://doi.org/10.3389/fcell.2024.1384047openalex-snapshot

Functional role of autophagy in testicular and ovarian steroidogenesis

inferred← citeshttps://doi.org/10.3389/fonc.2017.00174openalex-snapshot

Mitochondria-Associated Membranes As Networking Platforms and Regulators of Cancer Cell Fate

inferred← citeshttps://doi.org/10.3389/fonc.2020.619727openalex-snapshot

Pro-Tumoral Functions of Autophagy Receptors in the Modulation of Cancer Progression

inferred← citeshttps://doi.org/10.3389/fphys.2022.1015500openalex-snapshot

Role of AMPK in autophagy

inferred← citeshttps://doi.org/10.3390/biom11040496openalex-snapshot

Molecular Mechanisms behind Inherited Neurodegeneration of the Optic Nerve

inferred← citeshttps://doi.org/10.3390/biom11111669openalex-snapshot

Mitochondria-Endoplasmic Reticulum Crosstalk in Parkinson’s Disease: The Role of Brain Renin Angiotensin System Components

inferred← citeshttps://doi.org/10.3390/biom13020255openalex-snapshot

Fatty Acids as Potent Modulators of Autophagy Activity in White Adipose Tissue

inferred← citeshttps://doi.org/10.3390/biomedicines10051201openalex-snapshot

Phospholipid Membrane Transport and Associated Diseases

inferred← citeshttps://doi.org/10.3390/cells10061272openalex-snapshot

How Lipids Contribute to Autophagosome Biogenesis, a Critical Process in Plant Responses to Stresses

inferred← citeshttps://doi.org/10.3390/cells10113124openalex-snapshot

Activation Mechanisms of the VPS34 Complexes

inferred← citeshttps://doi.org/10.3390/cells7120278openalex-snapshot

Autophagy: An Essential Degradation Program for Cellular Homeostasis and Life

inferred← citeshttps://doi.org/10.3390/cells8121597openalex-snapshot

The Upstream Pathway of mTOR-Mediated Autophagy in Liver Diseases

inferred← citeshttps://doi.org/10.3390/ijms21020578openalex-snapshot

Pexophagy: A Model for Selective Autophagy

inferred← citeshttps://doi.org/10.3390/ijms21051643openalex-snapshot

Oral Microbes and Mucosal Dendritic Cells, “Spark and Flame” of Local and Distant Inflammatory Diseases

inferred← citeshttps://doi.org/10.3390/ijms222112087openalex-snapshot

Focus on the Small GTPase Rab1: A Key Player in the Pathogenesis of Parkinson’s Disease

inferred← citeshttps://doi.org/10.3390/v17050616openalex-snapshot

The COPII Transport Complex Participates in HPV16 Infection

inferred← citeshttps://doi.org/10.3410/f.736131597.793572494openalex-snapshot

Faculty Opinions recommendation of The autophagic membrane tether ATG2A transfers lipids between membranes.

inferred← citeshttps://doi.org/10.64898/2026.05.15.725374openalex-snapshot

Activation of the bridge-like lipid transfer protein Atg2 by Atg1-mediated phosphorylation

inferred← citeshttps://doi.org/10.70675/11eb36d1zc3baz4d74z8d00zc049667c5976openalex-snapshot

Role of p27/Kip1 in auphagy under metabolic stress conditions

inferred← citeshttps://doi.org/10.70675/3663f1cdz2637z4b11za0afza7e39569a2fcopenalex-snapshot

Exploration of autophagy modulation in cancer and infectious diseases

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