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Vast Differences in Strain-Level Diversity in the Gut Microbiota of Two Closely Related Honey Bee Species
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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From where did the W estern honeybee ( A pis mellifera) originate?
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Biogeography and Taxonomy of Honeybees
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The neutral theory of molecular evolution
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Biogeography and taxonomy of honeybees
inferredcites →https://doi.org/10.1016/j.cell.2014.12.038openalex-snapshot
Extensive Strain-Level Copy-Number Variation across Human Gut Microbiome Species
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The Ecology and Evolution of Pangenomes
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The Conservation of Native Honey Bees Is Crucial
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Species Diversity in Space and Time
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Investigation of the freely available easy-to-use software ‘EZR’ for medical statistics
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Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species–area relationships
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Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations
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Diversity is the question, not the answer
inferredcites →https://doi.org/10.1038/nature11711openalex-snapshot
Genomic variation landscape of the human gut microbiome
inferredcites →https://doi.org/10.1038/nature16504openalex-snapshot
Diet-induced extinctions in the gut microbiota compound over generations
inferredcites →https://doi.org/10.1038/ncomms14319openalex-snapshot
Unraveling the processes shaping mammalian gut microbiomes over evolutionary time
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A worldwide survey of genome sequence variation provides insight into the evolutionary history of the honeybee Apis mellifera
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Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
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Effective population size and patterns of molecular evolution and variation
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Gut microbial communities of social bees
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Explaining microbial genomic diversity in light of evolutionary ecology
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Prochlorococcus: the structure and function of collective diversity
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Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations
inferredcites →https://doi.org/10.1038/s41396-019-0475-zopenalex-snapshot
Horizontally transmitted symbiont populations in deep-sea mussels are genetically isolated
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High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
inferredcites →https://doi.org/10.1038/s41467-019-08303-0openalex-snapshot
Genomic diversity landscape of the honey bee gut microbiota
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The microbiome beyond the horizon of ecological and evolutionary theory
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Functional diversity enables multiple symbiont strains to coexist in deep-sea mussels
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The Neutral Theory of Molecular Evolution
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Studies on pollen sources for Apis cerana Fabr and Apis mellifera L bees at Muzaffarpur, Bihar, India
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Functional diversity within the simple gut microbiota of the honey bee
inferredcites →https://doi.org/10.1073/pnas.1405838111openalex-snapshot
Genomics and host specialization of honey bee and bumble bee gut symbionts
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Discovery of novel carbohydrate-active enzymes through the rational exploration of the protein sequences space
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Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli
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Calibrating bacterial evolution
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The lives of bees: the untold story of the honey bee in the wild
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Links between environment, diet, and the hunter-gatherer microbiome
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SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
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Fast and accurate short read alignment with Burrows–Wheeler transform
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The Sequence Alignment/Map format and SAMtools
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CD-HIT: accelerated for clustering the next-generation sequencing data
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Trimmomatic: a flexible trimmer for Illumina sequence data
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ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
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Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
inferredcites →https://doi.org/10.1093/molbev/msy130openalex-snapshot
Population Genomics Provide Insights into the Evolution and Adaptation of the Eastern Honey Bee (Apis cerana)
inferredcites →https://doi.org/10.1093/nar/gkf436openalex-snapshot
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
inferredcites →https://doi.org/10.1093/nar/gkt1178openalex-snapshot
The carbohydrate-active enzymes database (CAZy) in 2013
inferredcites →https://doi.org/10.1093/nar/gky1085openalex-snapshot
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
inferredcites →https://doi.org/10.1093/nar/gky418openalex-snapshot
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
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A molecular clock in endosymbiotic bacteria is calibrated using the insect hosts
inferredcites →https://doi.org/10.1099/ijs.0.059774-0openalex-snapshot
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
inferredcites →https://doi.org/10.1099/ijs.0.64483-0openalex-snapshot
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
inferredcites →https://doi.org/10.1101/gr.361602openalex-snapshot
The Bioperl Toolkit: Perl Modules for the Life Sciences
inferredcites →https://doi.org/10.1111/anzs.12200openalex-snapshot
Interval estimation for the breakpoint in segmented regression: a smoothed score‐based approach
inferredcites →https://doi.org/10.1111/ens.12206openalex-snapshot
Flower visitation patterns of the coexisting honey bees Apis cerana japonica and Apis mellifera (Hymenoptera: Apidae)
inferredcites →https://doi.org/10.1111/j.1462-2920.2011.02668.xopenalex-snapshot
Bacterial species may exist, metagenomics reveal
inferredcites →https://doi.org/10.1111/mec.13787openalex-snapshot
Strain diversity and host specificity in a specialized gut symbiont of honeybees and bumblebees
inferredcites →https://doi.org/10.1111/mec.14473openalex-snapshot
Rates of gut microbiome divergence in mammals
inferredcites →https://doi.org/10.1126/sciadv.1600513openalex-snapshot
Dynamic microbiome evolution in social bees
inferredcites →https://doi.org/10.1126/science.1111318openalex-snapshot
Larger Islands House More Bacterial Taxa
inferredcites →https://doi.org/10.1126/science.1146498openalex-snapshot
A Metagenomic Survey of Microbes in Honey Bee Colony Collapse Disorder
inferredcites →https://doi.org/10.1126/science.1155725openalex-snapshot
Evolution of Mammals and Their Gut Microbes
inferredcites →https://doi.org/10.1126/science.1248575openalex-snapshot
Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus
inferredcites →https://doi.org/10.1126/science.316.5827.970openalex-snapshot
The Case of the Empty Hives
inferredcites →https://doi.org/10.1126/science.aaf3951openalex-snapshot
Cospeciation of gut microbiota with hominids
inferredcites →https://doi.org/10.1128/aem.00014-18openalex-snapshot
How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
inferredcites →https://doi.org/10.1128/aem.01861-14openalex-snapshot
Routes of Acquisition of the Gut Microbiota of the Honey Bee Apis mellifera
inferredcites →https://doi.org/10.1128/mbio.01294-18openalex-snapshot
Drivers of Microbiome Biodiversity: A Review of General Rules, Feces, and Ignorance
inferredcites →https://doi.org/10.1128/mbio.01326-16openalex-snapshot
Metabolism of Toxic Sugars by Strains of the Bee Gut Symbiont Gilliamella apicola
inferredcites →https://doi.org/10.1128/mbio.01630-17openalex-snapshot
Diversification of Type VI Secretion System Toxins Reveals Ancient Antagonism among Bee Gut Microbes
inferredcites →https://doi.org/10.1128/msystems.00731-19openalex-snapshot
Consistent Metagenome-Derived Metrics Verify and Delineate Bacterial Species Boundaries
inferredcites →https://doi.org/10.1136/gut.2009.202515openalex-snapshot
Bacterial infection causes stress-induced memory dysfunction in mice
inferredcites →https://doi.org/10.1146/annurev-genet-111212-133307openalex-snapshot
The Genotypic View of Social Interactions in Microbial Communities
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2105-11-119openalex-snapshot
Prodigal: prokaryotic gene recognition and translation initiation site identification
inferredcites →https://doi.org/10.1186/1471-2164-16-1openalex-snapshot
Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing
inferredcites →https://doi.org/10.1186/s12862-018-1272-4openalex-snapshot
Factors driving effective population size and pan-genome evolution in bacteria
inferredcites →https://doi.org/10.1186/s12864-015-1476-6openalex-snapshot
Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut
inferredcites →https://doi.org/10.1186/s13059-015-0646-9openalex-snapshot
Inter-individual differences in the gene content of human gut bacterial species
inferredcites →https://doi.org/10.1186/s13059-015-0721-2openalex-snapshot
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
inferredcites →https://doi.org/10.1371/journal.pbio.0050077openalex-snapshot
The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
inferredcites →https://doi.org/10.1371/journal.pbio.0050168openalex-snapshot
What's Killing American Honey Bees?
inferredcites →https://doi.org/10.1371/journal.pbio.1001388openalex-snapshot
Revisiting an Old Riddle: What Determines Genetic Diversity Levels within Species?
inferredcites →https://doi.org/10.1371/journal.pbio.2003467openalex-snapshot
Disentangling metabolic functions of bacteria in the honey bee gut
inferredcites →https://doi.org/10.1371/journal.pgen.1004596openalex-snapshot
Hidden Diversity in Honey Bee Gut Symbionts Detected by Single-Cell Genomics
inferredcites →https://doi.org/10.2307/1929150openalex-snapshot
On the Relation Between Species and Area
inferredcites →https://doi.org/10.3389/fmicb.2016.01475openalex-snapshot
Beyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut Microbiota
inferredcites →https://doi.org/10.3390/insects4040558openalex-snapshot
Ecology, Behaviour and Control of Apis cerana with a Focus on Relevance to the Australian Incursion
inferredcites →https://doi.org/10.3896/ibra.1.52.4.07openalex-snapshot
Standard methods for research onApis melliferagut symbionts
inferredcites →https://doi.org/10.48550/arxiv.1207.3907openalex-snapshot
Haplotype-based variant detection from short-read sequencing
inferredcites →https://doi.org/10.5281/zenodo.1146014openalex-snapshot
GNU Parallel 20210322 ('2002-01-06')
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Species diversity in space and time
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/ggn2.202100065openalex-snapshot
Recovering High‐Quality Host Genomes from Gut Metagenomic Data through Genotype Imputation
inferred← citeshttps://doi.org/10.1007/978-3-031-98913-1_6openalex-snapshot
Honey: The “Marvel Molecule” of Mother Nature Augments Some Cutting-Edge Technologies for Analytical Validation
inferred← citeshttps://doi.org/10.1007/s00040-021-00837-1openalex-snapshot
The gut microbiota of bumblebees
inferred← citeshttps://doi.org/10.1007/s00203-022-02800-5openalex-snapshot
Distinct gut microbiota profiles of Asian honey bee (Apis cerana) foragers
inferred← citeshttps://doi.org/10.1007/s00248-022-02027-3openalex-snapshot
Temporal Changes in Gut Microbiota Composition and Pollen Diet Associated with Colony Weakness of a Stingless Bee
inferred← citeshttps://doi.org/10.1007/s00248-025-02544-xopenalex-snapshot
Bacteria in Honeybee Crops Are Decoupled from Those in Floral Nectar and Bee Mouths
inferred← citeshttps://doi.org/10.1007/s00284-025-04525-2openalex-snapshot
Host-Driven Functional Divergence in Gut Microbiota of Honeybees Apis cerana and Apis mellifera: Implications for Pollination, Nutrition, and Sustainable Apiculture
inferred← citeshttps://doi.org/10.1007/s10482-026-02422-7openalex-snapshot
Species-specific structuring of gut bacterial and fungal communities in honey bees Apis cerana and Apis mellifera
inferred← citeshttps://doi.org/10.1007/s11274-025-04654-7openalex-snapshot
Metagenomic analysis of microbial communities and associated resistance genes, virulence genes, and mobile genetic elements in natural honey from Mu Cang Chai, Vietnam
inferred← citeshttps://doi.org/10.1016/b978-0-323-95424-2.00029-7openalex-snapshot
Microbial symbiosis in social insects
inferred← citeshttps://doi.org/10.1016/j.biotechadv.2023.108245openalex-snapshot
Carbohydrate flow through agricultural ecosystems: Implications for synthesis and microbial conversion of carbohydrates
inferred← citeshttps://doi.org/10.1016/j.celrep.2024.114408openalex-snapshot
Temporospatial dynamics and host specificity of honeybee gut bacteria
inferred← citeshttps://doi.org/10.1016/j.cois.2021.12.011openalex-snapshot
Tripartite interactions: how immunity, microbiota and pathogens interact and affect pathogen virulence evolution
inferred← citeshttps://doi.org/10.1016/j.cub.2020.05.040openalex-snapshot
Microbiome Evolution: Having the Guts to Be Different
inferred← citeshttps://doi.org/10.1016/j.envpol.2022.120278openalex-snapshot
Antibiotics-induced changes in intestinal bacteria result in the sensitivity of honey bee to virus
inferred← citeshttps://doi.org/10.1016/j.jare.2021.08.002openalex-snapshot
Genetic divergence and functional convergence of gut bacteria between the Eastern honey bee Apis cerana and the Western honey bee Apis mellifera
inferred← citeshttps://doi.org/10.1016/j.micres.2025.128048openalex-snapshot
Strain diversity and host specificity of the gut symbiont Gilliamella in Apis mellifera, Apis cerana and Bombus terrestris
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.161637openalex-snapshot
Ecotoxicological effects of common fungicides on the eastern honeybee Apis cerana cerana (Hymenoptera)
inferred← citeshttps://doi.org/10.1016/j.syapm.2025.126591openalex-snapshot
Tenuifilum osseticum sp. nov., a novel thermophilic hydrolytic bacterium within the Tenuifilaceae isolated from a North Ossetian thermal spring, and emended description of the genus Tenuifilum
inferred← citeshttps://doi.org/10.1016/j.tim.2021.02.005openalex-snapshot
Evolution of Microbiota–Host Associations: The Microbe’s Perspective
inferred← citeshttps://doi.org/10.1038/s41467-023-43352-6openalex-snapshot
Identification of peptides from honeybee gut symbionts as potential antimicrobial agents against Melissococcus plutonius
inferred← citeshttps://doi.org/10.1038/s41467-025-64115-5openalex-snapshot
Evolution of gut microbiota across honeybee species revealed by comparative metagenomics
inferred← citeshttps://doi.org/10.1038/s41467-025-64706-2openalex-snapshot
Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota
inferred← citeshttps://doi.org/10.1038/s41522-024-00557-xopenalex-snapshot
Host specificity and cophylogeny in the “animal-gut bacteria-phage” tripartite system
inferred← citeshttps://doi.org/10.1038/s41522-025-00798-4openalex-snapshot
Honeybee-Gilliamella synergy in carbohydrate metabolism enhances host thermogenesis in cold acclimation
inferred← citeshttps://doi.org/10.1038/s41579-023-00990-3openalex-snapshot
The honeybee microbiota and its impact on health and disease
inferred← citeshttps://doi.org/10.1038/s41598-025-12823-9openalex-snapshot
Antibiotic treatment of honey bee colonies alters early gut microbiome assembly and induces persistent dysbiosis in newly emerged workers
inferred← citeshttps://doi.org/10.1038/s41598-025-90763-0openalex-snapshot
High abundance of lactobacilli in the gut microbiome of honey bees during winter
inferred← citeshttps://doi.org/10.1073/pnas.2000228117openalex-snapshot
Honey bees harbor a diverse gut virome engaging in nested strain-level interactions with the microbiota
inferred← citeshttps://doi.org/10.1073/pnas.2104378118openalex-snapshot
Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groups
inferred← citeshttps://doi.org/10.1073/pnas.2115013119openalex-snapshot
Species divergence in gut-restricted bacteria of social bees
inferred← citeshttps://doi.org/10.1080/00218839.2022.2047422openalex-snapshot
Impacts of Apis cerana gut microbes on Nosema ceranae proliferation in Apis mellifera
inferred← citeshttps://doi.org/10.1080/1828051x.2024.2424404openalex-snapshot
Effect of host genetics on gut microbiota composition in an italian honeybee breeding population
inferred← citeshttps://doi.org/10.1093/femsec/fiac084openalex-snapshot
Phylogenomic analysis and metabolic role reconstruction of mutualistic Rhizobiales hindgut symbionts of Acromyrmex leaf-cutting ants
inferred← citeshttps://doi.org/10.1093/femsre/fuab056openalex-snapshot
Pesticide-induced disturbances of bee gut microbiotas
inferred← citeshttps://doi.org/10.1093/ismejo/wraf016openalex-snapshot
Life history strategies complement niche partitioning to support the coexistence of closely related Gilliamella species in the bee gut
inferred← citeshttps://doi.org/10.1093/ismejo/wrag127openalex-snapshot
Host and microbial factors influence bacterial colonization of the honey bee gut
inferred← citeshttps://doi.org/10.1093/jee/toag064openalex-snapshot
Strain-dependent resistance of yellow mealworm (Coleoptera: Tenebrionidae) to bacterial infection with and without probiotic supplementation
inferred← citeshttps://doi.org/10.1093/lambio/ovad134openalex-snapshot
Effects of the combination of Lactobacillus helveticus and isomalto-oligosaccharide on survival, gut microbiota, and immune function in Apis cerana worker bees
inferred← citeshttps://doi.org/10.1093/molbev/msae256openalex-snapshot
Co-evolution and Gene Transfers Drive Speciation Patterns in Host-Associated Bacteria
inferred← citeshttps://doi.org/10.1098/rspb.2020.1480openalex-snapshot
Thermal niches of specialized gut symbionts: the case of social bees
inferred← citeshttps://doi.org/10.1098/rstb.2023.0071openalex-snapshot
The role of animal hosts in shaping gut microbiome variation
inferred← citeshttps://doi.org/10.1099/ijsem.0.004712openalex-snapshot
Frischella japonica sp. nov., an anaerobic member of the Orbales in the Gammaproteobacteria, isolated from the gut of the eastern honey bee, Apis cerana japonica Fabricius
inferred← citeshttps://doi.org/10.1101/2020.05.19.103937openalex-snapshot
Host-associated microbe PCR (hamPCR): accessing new biology through convenient measurement of both microbial load and community composition
inferred← citeshttps://doi.org/10.1101/2020.12.17.423353openalex-snapshot
Honeybee genetics shape the strain-level structure of gut microbiota in social transmission
inferred← citeshttps://doi.org/10.1101/2022.01.23.477436openalex-snapshot
Diet outweighs genetics in shaping gut microbiomes in Asian honeybee
inferred← citeshttps://doi.org/10.1101/2025.11.24.690285openalex-snapshot
BarTn7: Optimizing Bacterial Lineage Tracking at Sub-Species Resolution for Population Dynamics in Ecological and Evolutionary Studies
inferred← citeshttps://doi.org/10.1111/1365-2435.14650openalex-snapshot
Probing the functional significance of wild animal microbiomes using omics data
inferred← citeshttps://doi.org/10.1111/1744-7917.13040openalex-snapshot
Bumblebees with the socially transmitted microbiome: A novel model organism for gut microbiota research
inferred← citeshttps://doi.org/10.1111/1744-7917.13365openalex-snapshot
A review on recent taxonomic updates of gut bacteria associated with social bees, with a curated genomic reference database
inferred← citeshttps://doi.org/10.1111/1758-2229.12895openalex-snapshot
Getting to know our microbial friends by dropping into their neighbourhood
inferred← citeshttps://doi.org/10.1111/jeb.14216openalex-snapshot
Cryptic community structure and metabolic interactions among the heritable facultative symbionts of the pea aphid
inferred← citeshttps://doi.org/10.1128/aem.02036-24openalex-snapshot
Bumble bee gut microbial community structure differs between species and commercial suppliers, but metabolic potential remains largely consistent
inferred← citeshttps://doi.org/10.1128/mbio.00751-21openalex-snapshot
Host Species and Geography Differentiate Honeybee Gut Bacterial Communities by Changing the Relative Contribution of Community Assembly Processes
inferred← citeshttps://doi.org/10.1128/mbio.03538-22openalex-snapshot
Deep Divergence and Genomic Diversification of Gut Symbionts of Neotropical Stingless Bees
inferred← citeshttps://doi.org/10.1128/mmbr.00080-23openalex-snapshot
Host specificity of gut microbiota associated with social bees: patterns and processes
inferred← citeshttps://doi.org/10.1128/msphere.00262-24openalex-snapshot
Fecal transplant allows transmission of the gut microbiota in honey bees
inferred← citeshttps://doi.org/10.1128/msystems.00166-25openalex-snapshot
Evolutionary trends in Bombella apis CRISPR-Cas systems
inferred← citeshttps://doi.org/10.1128/spectrum.00706-25openalex-snapshot
Types and characteristics of shared microbiota within families of ethnic minorities in Inner Mongolia
inferred← citeshttps://doi.org/10.1128/spectrum.01941-22openalex-snapshot
Opposing Growth Responses of Lepidopteran Larvae to the Establishment of Gut Microbiota
inferred← citeshttps://doi.org/10.1128/spectrum.02105-21openalex-snapshot
Amplicon Sequencing of Single-Copy Protein-Coding Genes Reveals Accurate Diversity for Sequence-Discrete Microbiome Populations
inferred← citeshttps://doi.org/10.1134/s1062359025610377openalex-snapshot
Honey Bees and Probiotics: Indigenous Honey Bees Gut Microbial Communities and Their Potential Probiotic Attributes
inferred← citeshttps://doi.org/10.1134/s2079086425600602openalex-snapshot
Harnessing the Gut Microbiota of Honeybees: Unlocking Microbial Insights for Sustainable Apiculture Practices
inferred← citeshttps://doi.org/10.1146/annurev-ento-020723-102548openalex-snapshot
Toward an Integrated Understanding of the Lepidoptera Microbiome
inferred← citeshttps://doi.org/10.1186/s13059-023-03131-4openalex-snapshot
Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers
inferred← citeshttps://doi.org/10.1186/s40168-021-01163-1openalex-snapshot
Strain-level analysis reveals the vertical microbial transmission during the life cycle of bumblebee
inferred← citeshttps://doi.org/10.1186/s40168-021-01174-yopenalex-snapshot
Honey bee genetics shape the strain-level structure of gut microbiota in social transmission
inferred← citeshttps://doi.org/10.1186/s40168-022-01268-1openalex-snapshot
Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.1186/s40168-022-01333-9openalex-snapshot
Strain-level profiling with picodroplet microfluidic cultivation reveals host-specific adaption of honeybee gut symbionts
inferred← citeshttps://doi.org/10.1186/s40793-023-00467-zopenalex-snapshot
Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.1186/s42523-023-00248-6openalex-snapshot
A phylogenomic and comparative genomic analysis of Commensalibacter, a versatile insect symbiont
inferred← citeshttps://doi.org/10.1186/s42523-024-00350-3openalex-snapshot
Diet affects reproductive development and microbiota composition in honey bees
inferred← citeshttps://doi.org/10.1264/jsme2.me23081openalex-snapshot
Gustatory Responsiveness of Honey Bees Colonized with a Defined or Conventional Gut Microbiota
inferred← citeshttps://doi.org/10.13057/biodiv/d220246openalex-snapshot
Composition and diversity of bacteria from giant Asian honeybee Apis dorsata gut
inferred← citeshttps://doi.org/10.13057/biodiv/d260417openalex-snapshot
16S rRNA metagenomic analysis of the Asiatic worker honeybee (Apis cerana) gut microbiome from an apiary in Bandung, Indonesia
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1924066/v1openalex-snapshot
Gut microbiome profiling of term versus preterm infants using Nanopore MinION and Illumina MiSeq sequencing
inferred← citeshttps://doi.org/10.21203/rs.3.rs-225332/v1openalex-snapshot
Gut Bacterial Inhabitants of Open Nested Honey Bee, Apis Florea
inferred← citeshttps://doi.org/10.21597/jist.1204926openalex-snapshot
Gut Bacterial Microbiota of The Honeybee, Apis mellifera (Hymenoptera: Apidae) with a New Host Record
inferred← citeshttps://doi.org/10.2903/sp.efsa.2024.en-8602openalex-snapshot
Roadmap for the integration of environmental microbiomes in risk assessments under EFSA's remit
inferred← citeshttps://doi.org/10.3330/hikakuseiriseika.42.37openalex-snapshot
Influence of gut microbiota on behaviors of a honey bee
inferred← citeshttps://doi.org/10.3389/fevo.2022.837381openalex-snapshot
Gut Bacterial Flora of Open Nested Honeybee, Apis florea
inferred← citeshttps://doi.org/10.3389/fmicb.2021.717990openalex-snapshot
Resistance and Vulnerability of Honeybee (Apis mellifera) Gut Bacteria to Commonly Used Pesticides
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1016608openalex-snapshot
Gut bacteria reflect the adaptation of Diestrammena japanica (Orthoptera: Rhaphidophoridae) to the cave
inferred← citeshttps://doi.org/10.3389/fmicb.2022.934459openalex-snapshot
Significant compositional and functional variation reveals the patterns of gut microbiota evolution among the widespread Asian honeybee populations
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1148466openalex-snapshot
Gut microbiome profiling of neonates using Nanopore MinION and Illumina MiSeq sequencing
inferred← citeshttps://doi.org/10.3389/fmicb.2025.1733283openalex-snapshot
Sucrose supplementation influences gut microbial diversity and functional shifts in Apis cerana indica
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1814222openalex-snapshot
Significant strain microdiversity in mother-infant dyad cohorts across ethnic groups reveals population specificity of bifidobacteria microbiota transmission
inferred← citeshttps://doi.org/10.3389/fvets.2023.1149876openalex-snapshot
Gut microbial diversity in Apis cerana indica and Apis florea colonies: a comparative study
inferred← citeshttps://doi.org/10.3390/ijms24065354openalex-snapshot
Ternary Mixture of Azoxystrobin, Boscalid and Pyraclostrobin Disrupts the Gut Microbiota and Metabolic Balance of Honeybees (Apis cerana cerana)
inferred← citeshttps://doi.org/10.3390/insects14050444openalex-snapshot
Basic Structures of Gut Bacterial Communities in Eusocial Insects
inferred← citeshttps://doi.org/10.3390/insects16020112openalex-snapshot
Gut Microbiome Diversity in European Honeybees (Apis mellifera L.) from La Union, Northern Luzon, Philippines
inferred← citeshttps://doi.org/10.3390/insects16050478openalex-snapshot
Host Specificity of Snodgrassella in Eastern and Western Honeybees and Its Effects on Naturally Occurring Deformed Wing Virus Titers
inferred← citeshttps://doi.org/10.3390/microorganisms8101578openalex-snapshot
Inter- and Intra-Species Diversity of Lactic Acid Bacteria in Apis mellifera ligustica Colonies
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928870openalex-snapshot
Additional file 2 of Strain-level analysis reveals the vertical microbial transmission during the life cycle of bumblebee
inferred← citeshttps://doi.org/10.6084/m9.figshare.16928873openalex-snapshot
Additional file 3 of Strain-level analysis reveals the vertical microbial transmission during the life cycle of bumblebee
inferred← citeshttps://doi.org/10.6084/m9.figshare.19695749openalex-snapshot
Additional file 1 of Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.6084/m9.figshare.19695755openalex-snapshot
Additional file 2 of Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.6084/m9.figshare.19695758openalex-snapshot
Additional file 3 of Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.6084/m9.figshare.19695761openalex-snapshot
Additional file 4 of Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.6084/m9.figshare.19695764openalex-snapshot
Additional file 5 of Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.6084/m9.figshare.19695767openalex-snapshot
Additional file 6 of Geographical resistome profiling in the honeybee microbiome reveals resistance gene transfer conferred by mobilizable plasmids
inferred← citeshttps://doi.org/10.6084/m9.figshare.20761552openalex-snapshot
Additional file 1 of Strain-level profiling with picodroplet microfluidic cultivation reveals host-specific adaption of honeybee gut symbionts
inferred← citeshttps://doi.org/10.6084/m9.figshare.20761555openalex-snapshot
Additional file 4 of Strain-level profiling with picodroplet microfluidic cultivation reveals host-specific adaption of honeybee gut symbionts
inferred← citeshttps://doi.org/10.6084/m9.figshare.20761558openalex-snapshot
Additional file 5 of Strain-level profiling with picodroplet microfluidic cultivation reveals host-specific adaption of honeybee gut symbionts
inferred← citeshttps://doi.org/10.6084/m9.figshare.20761561openalex-snapshot
Additional file 6 of Strain-level profiling with picodroplet microfluidic cultivation reveals host-specific adaption of honeybee gut symbionts
inferred← citeshttps://doi.org/10.6084/m9.figshare.24779172openalex-snapshot
Additional file 1 of Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers
inferred← citeshttps://doi.org/10.6084/m9.figshare.24779359openalex-snapshot
Additional file 2 of Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577404openalex-snapshot
Additional file 1 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577407openalex-snapshot
Additional file 2 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577410openalex-snapshot
Additional file 3 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577413openalex-snapshot
Additional file 4 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577416openalex-snapshot
Additional file 5 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577419openalex-snapshot
Additional file 6 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577422openalex-snapshot
Additional file 7 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26577425openalex-snapshot
Additional file 8 of Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
inferred← citeshttps://doi.org/10.6084/m9.figshare.26651256openalex-snapshot
Additional file 3 of Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers
inferred← citeshttps://doi.org/10.64898/2026.02.05.704103openalex-snapshot
Pervasive and dynamic gut dysbiosis in wild bumble bees
inferred← citeshttps://doi.org/10.64898/2026.02.27.708436openalex-snapshot
Host-structured adult butterfly microbiomes share a common core across continents
inferred← citeshttps://doi.org/10.7554/elife.66186openalex-snapshot
Host-associated microbe PCR (hamPCR) enables convenient measurement of both microbial load and community composition
inferred← citeshttps://doi.org/10.7554/elife.68583openalex-snapshot
Niche partitioning facilitates coexistence of closely related honey bee gut bacteria
inferred← citeshttps://doi.org/10.7717/peerj.20050openalex-snapshot
Dynamics of the hindgut microbiota of the Japanese honey bees (Apis cerana japonica) throughout the overwintering period
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