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Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: Evidence for a misleading mitochondrial gene tree

https://doi.org/10.1016/j.ympev.2005.12.016

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]

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Mother species–father species: unidirectional hybridization in animals with female choice

inferredcites →https://doi.org/10.1006/jare.2001.0852openalex-snapshot

Do vertebral-line patterns in two horned lizards (Phrynosoma spp.) mimic plant-stem shadows and stem litter?

inferredcites →https://doi.org/10.1006/mpev.1995.1020openalex-snapshot

Phylogenetic Relationships among Phrynosomatid Lizards as Inferred from Mitochondrial Ribosomal DNA Sequences: Substitutional Bias and Information Content of Transitions Relative to Transversions

inferredcites →https://doi.org/10.1006/mpev.1996.0057openalex-snapshot

Molecular Homology Assessment and Phylogeny in the Lizard Family Opluridae (Squamata: Iguania)

inferredcites →https://doi.org/10.1007/978-1-4615-2381-9openalex-snapshot

Molecular Markers, Natural History and Evolution

inferredcites →https://doi.org/10.1007/bf00178256openalex-snapshot

Estimating the pattern of nucleotide substitution

inferredcites →https://doi.org/10.1007/bf02101694openalex-snapshot

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

inferredcites →https://doi.org/10.1007/bf02101990openalex-snapshot

A new method for calculating evolutionary substitution rates

inferredcites →https://doi.org/10.1016/0169-5347(94)90330-1openalex-snapshot

Molecular markers, natural history and evolution

inferredcites →https://doi.org/10.1016/0378-1119(87)90409-4openalex-snapshot

Evolutionary processes and theory

inferredcites →https://doi.org/10.1016/b978-0-12-398760-0.50026-2openalex-snapshot

PHYLOGENETIC RELATIONSHIPS OF MITOCHONDRIAL DNA UNDER VARIOUS DEMOGRAPHIC MODELS OF SPECIATION11Work was supported by an NIH predoctoral fellowship to JEN, and by NSF Grant BSR-8217291.

inferredcites →https://doi.org/10.1016/j.ympev.2003.11.005openalex-snapshot

Horned lizard (Phrynosoma) phylogeny inferred from mitochondrial genes and morphological characters: understanding conflicts using multiple approaches

inferredcites →https://doi.org/10.1016/s0140-1963(18)31074-7openalex-snapshot

Stone mimicry in the round-tailed horned lizard, Phrynosoma modestum (Sauria: Iguanidae)

inferredcites →https://doi.org/10.1038/063415a0openalex-snapshot

The Crocodilians, Lizards, and Snakes of North America

inferredcites →https://doi.org/10.1038/ng0197-47openalex-snapshot

Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes

inferredcites →https://doi.org/10.1046/j.1365-294x.2003.02063.xopenalex-snapshot

The incomplete natural history of mitochondria

inferredcites →https://doi.org/10.1080/106351500750049752openalex-snapshot

Likelihood-Based Tests of Topologies in Phylogenetics

inferredcites →https://doi.org/10.1080/10635150118469openalex-snapshot

Selecting the Best-Fit Model of Nucleotide Substitution

inferredcites →https://doi.org/10.1080/106351502753475871openalex-snapshot

Molecular Systematics of the Eastern Fence Lizard (Sceloporus undulatus): A Comparison of Parsimony, Likelihood, and Bayesian Approaches

inferredcites →https://doi.org/10.1080/10635150290102366openalex-snapshot

Potential Applications and Pitfalls of Bayesian Inference of Phylogeny

inferredcites →https://doi.org/10.1080/10635150490264699openalex-snapshot

Bayesian Phylogenetic Analysis of Combined Data

inferredcites →https://doi.org/10.1080/10635150490423520openalex-snapshot

The Importance of Proper Model Assumption in Bayesian Phylogenetics

inferredcites →https://doi.org/10.1080/10635150490445797openalex-snapshot

Data Partitions and Complex Models in Bayesian Analysis: The Phylogeny of Gymnophthalmid Lizards

inferredcites →https://doi.org/10.1080/10635150490522629openalex-snapshot

Frequentist Properties of Bayesian Posterior Probabilities of Phylogenetic Trees Under Simple and Complex Substitution Models

inferredcites →https://doi.org/10.1080/10635150590924208openalex-snapshot

Polytomies and Bayesian Phylogenetic Inference

inferredcites →https://doi.org/10.1080/10635150590946808openalex-snapshot

Partitioned Bayesian Analyses, Partition Choice, and the Phylogenetic Relationships of Scincid Lizards

inferredcites →https://doi.org/10.1080/106351598260581openalex-snapshot

Combining Data Sets with Different Phylogenetic Histories

inferredcites →https://doi.org/10.1080/10635159950127411openalex-snapshot

Phylogenetic Relationships Among the Phrynosomatid Sand Lizards Inferred from Mitochondrial DNA Sequences Generated by Heterogeneous Evolutionary Processes

inferredcites →https://doi.org/10.1093/bioinformatics/17.8.754openalex-snapshot

MRBAYES: Bayesian inference of phylogenetic trees

inferredcites →https://doi.org/10.1093/bioinformatics/btm388openalex-snapshot

AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics

inferredcites →https://doi.org/10.1093/icb/41.1.134openalex-snapshot

Phylogeography: The History and Formation of Species

inferredcites →https://doi.org/10.1093/molbev/msi129openalex-snapshot

Evaluating the Performance of a Successive-Approximations Approach to Parameter Optimization in Maximum-Likelihood Phylogeny Estimation

inferredcites →https://doi.org/10.1093/nar/25.24.4876openalex-snapshot

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025706openalex-snapshot

Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026201openalex-snapshot

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040071openalex-snapshot

Taxonomic congruence versus total evidence, and amniote phylogeny inferred from fossils, molecules, and morphology.

inferredcites →https://doi.org/10.1093/sysbio/43.3.387openalex-snapshot

Mitochondrial DNA Sequence Divergence and Phylogenetic Relationships among Eight Chromosome Races of the Sceloporus Grammicus Complex (Phrynosomatidae) in Central Mexico

inferredcites →https://doi.org/10.1093/sysbio/46.2.284openalex-snapshot

Molecular Systematics of Short-Horned Lizards: Biogeography and Taxonomy of a Widespread Species Complex

inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb01231.xopenalex-snapshot

PERSPECTIVE: GENE DIVERGENCE, POPULATION DIVERGENCE, AND THE VARIANCE IN COALESCENCE TIME IN PHYLOGEOGRAPHIC STUDIES

inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb00229.xopenalex-snapshot

STOCHASTICITY OVERRULES THE "THREE-TIMES RULE": GENETIC DRIFT, GENETIC DRAFT, AND COALESCENCE TIMES FOR NUCLEAR LOCI VERSUS MITOCHONDRIAL DNA

inferredcites →https://doi.org/10.1111/j.1095-8312.1992.tb00648.xopenalex-snapshot

Phylogenetic relationships and rates of allozyme evolution among the lineages of sceloporine sand lizards

inferredcites →https://doi.org/10.1111/j.1095-8339.1829.tb00258.xopenalex-snapshot

VII. Description of a new Species of Agama, brought from the Columbia River by Mr. Douglass.

inferredcites →https://doi.org/10.1111/j.1365-294x.2006.02892.xopenalex-snapshot

Phylogeography of the flat‐tailed horned lizard (Phrynosoma mcallii) and systematics of the P. mcallii–platyrhinos mtDNA complex

inferredcites →https://doi.org/10.1111/j.1420-9101.2004.00770.xopenalex-snapshot

Evolution of viviparity in horned lizards (Phrynosoma): testing the cold-climate hypothesis

inferredcites →https://doi.org/10.1111/j.1558-5646.1995.tb02308.xopenalex-snapshot

INFERRING PHYLOGENIES FROM mt DNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES

inferredcites →https://doi.org/10.1111/j.1558-5646.1998.tb02259.xopenalex-snapshot

THE EVOLUTION OF FEMALE-BIASED SEXUAL SIZE DIMORPHISM: A POPULATION-LEVEL COMPARATIVE STUDY IN HORNED LIZARDS (PHRYNOSOMA)

inferredcites →https://doi.org/10.1111/j.1558-5646.1999.tb04570.xopenalex-snapshot

MOLECULAR PHYLOGENETICS AND EVOLUTION OF SEXUAL DICHROMATISM AMONG POPULATIONS OF THE YARROW'S SPINY LIZARD (SCELOPORUS JARROVII)

inferredcites →https://doi.org/10.1126/science.1094790openalex-snapshot

How the Horned Lizard Got Its Horns

inferredcites →https://doi.org/10.1126/science.1099742openalex-snapshot

Comment on "How the Horned Lizard Got Its Horns"

inferredcites →https://doi.org/10.1146/annurev.ecolsys.22.1.281openalex-snapshot

Molecular Changes At Speciation

inferredcites →https://doi.org/10.1146/annurev.es.23.110192.002313openalex-snapshot

Phylogenetic Taxonomy

inferredcites →https://doi.org/10.1146/annurev.es.26.110195.003301openalex-snapshot

SEPARATE VERSUS COMBINED ANALYSIS OF PHYLOGENETIC EVIDENCE

inferredcites →https://doi.org/10.1163/156853897x00044openalex-snapshot

Physiological (rapid) change of color in horned lizards

inferredcites →https://doi.org/10.1525/9780520926752openalex-snapshot

Introduction to Horned Lizards of North America

inferredcites →https://doi.org/10.1525/california/9780520228252.001.0001openalex-snapshot

Introduction to Horned Lizards of North America

inferredcites →https://doi.org/10.1643/0045-8511(2000)2000[0222:rmafrc]2.0.co;2openalex-snapshot

Reproductive Mode and Female Reproductive Cycles of Two Endemic Mexican Horned Lizards (Phrynosoma taurusandPhrynosoma braconnieri)

inferredcites →https://doi.org/10.1643/0045-8511(2001)001[0309:paothl]2.0.co;2openalex-snapshot

Phylogenetic Analysis of the Horned Lizards (Phrynosomatidae:Phrynosoma): Evidence from Mitochondrial DNA and Morphology

inferredcites →https://doi.org/10.1643/0045-8511(2001)001[1114:bsvihl]2.0.co;2openalex-snapshot

Blood-Squirting Variability in Horned Lizards (Phrynosoma)

inferredcites →https://doi.org/10.1643/ch-03-157r1openalex-snapshot

Responses of Kit Foxes (Vulpes macrotis) to Antipredator Blood-Squirting and Blood of Texas Horned Lizards (Phrynosoma cornutum)

inferredcites →https://doi.org/10.1655/02-100openalex-snapshot

GEOGRAPHIC VARIATION IN PHRYNOSOMA CORONATUM (LACERTILIA, PHRYNOSOMATIDAE): FURTHER EVIDENCE FOR A PENINSULAR ARCHIPELAGO

inferredcites →https://doi.org/10.1666/0022-3360(2004)078<0989:dapftc>2.0.co;2openalex-snapshot

DEVELOPING A PROTOCOL FOR THE CONVERSION OF RANK-BASED TAXON NAMES TO PHYLOGENETICALLY DEFINED CLADE NAMES, AS EXEMPLIFIED BY TURTLES

inferredcites →https://doi.org/10.1670/0022-1511(2002)036[0578:osotch]2.0.co;2openalex-snapshot

Ontogenetic Scaling of the Cranial Horn Array in Phrynosoma orbiculare (Squamata: Phrynosomatidae)

inferredcites →https://doi.org/10.1894/0038-4909(2004)049<0267:dbsipd>2.0.co;2openalex-snapshot

DEFENSIVE BLOOD SQUIRTING IN PHRYNOSOMA DITMARSI AND A HIGH RATE OF HUMAN-INDUCED BLOOD SQUIRTING IN PHRYNOSOMA ASIO

inferredcites →https://doi.org/10.2307/1441115openalex-snapshot

Temperature Regulation and Diurnal Activity in Horned Lizards

inferredcites →https://doi.org/10.2307/1442073openalex-snapshot

Evolutionary Osteology and Relationships of the Horned Lizard Genus Phrynosoma (Family Iguanidae)

inferredcites →https://doi.org/10.2307/1442418openalex-snapshot

Ecology of Horned Lizards: A Review with Special Reference to Phrynosoma platyrhinos

inferredcites →https://doi.org/10.2307/1445486openalex-snapshot

The Detoxification of Ant (Pogonomyrmex) Venom by a Blood Factor in Horned Lizards (Phrynosoma)

inferredcites →https://doi.org/10.2307/1446212openalex-snapshot

Canid Elicitation of Blood-Squirting in a Horned Lizard (Phrynosoma cornutum)

inferredcites →https://doi.org/10.2307/1447682openalex-snapshot

Molecular Systematics

inferredcites →https://doi.org/10.2307/1466980openalex-snapshot

Evolution of the Lizard Family Phrynosomatidae as Inferred from Diverse Types of Data

inferredcites →https://doi.org/10.2307/2531928openalex-snapshot

Evolutionary Processes and Theory.

inferredcites →https://doi.org/10.2307/2640448openalex-snapshot

Molecular Phylogenetics and Evolution of Sexual Dichromatism among Populations of the Yarrow's Spiny Lizard (Sceloporus jarrovii)

inferredcites →https://doi.org/10.2307/3669384openalex-snapshot

A Comparative Study of Display Behavior in Phrynosoma (Iguanidae)

inferredcites →https://doi.org/10.2307/3671494openalex-snapshot

Defensive Head Posture in Horned Lizards (Phrynosoma: Sauria: Iguanidae)

inferredcites →https://doi.org/10.2307/40023610openalex-snapshot

Comparative Reproductive Ecology of Horned Lizards (Genus Phrynosoma) in Southwestern United States and Northern Mexico

inferredcites →https://doi.org/10.3996/nafa.7.0002openalex-snapshot

ANNOTATED LIST OF THE REPTILES AND BATRACHIANS COLLECTED BY THE DEATH VALLEY EXPEDITION IN 1891, WITH DESCRIPTIONS OF NEW SPECIES

inferredcites →https://doi.org/10.5281/zenodo.16512307openalex-snapshot

Contributions to the herpetology of tropical America

inferredcites →https://doi.org/10.5281/zenodo.16514954openalex-snapshot

Cophosaurus texanus, neue Eidechsengattung aus Texas

inferredcites →https://doi.org/10.5281/zenodo.16673241openalex-snapshot

Taxonomy and distribution of the horned lizard genus Phrynosoma

inferredcites →https://doi.org/10.5479/si.00963801.1437.565openalex-snapshot

A new lizard of the genus Phrynosoma, from Mexico

inferredcites →https://doi.org/10.5860/choice.37-3344openalex-snapshot

Species: new interdisciplinary essays

inferredcites →https://doi.org/10.5860/choice.37-5647openalex-snapshot

Phylogeography: the history and formation of species

inferredcites →https://doi.org/10.5962/bhl.part.18568openalex-snapshot

Thirteenth contribution to the herpetology of tropical America

inferredcites →https://doi.org/10.5962/bhl.title.5499openalex-snapshot

Catalogue of the Specimens of lizards in the collection of the British museum

inferredcites →https://doi.org/10.5962/p.226824openalex-snapshot

A phylogenetic study of the horned lizards, genus Phrynosoma, based on skeletal and external morphology

inferredcites →https://doi.org/10.7551/mitpress/6396.003.0020openalex-snapshot

Getting Rid of Species?

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Phylogenetic structure of Holbrookia lacerata (Cope 1880) (Squamata: Phrynosomatidae): one species or two?

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Functional implications of ear loss in sand lizards

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Brain‐derived neurotrophic factor: mRNA expression and protein distribution in the brain of the teleost Nothobranchius furzeri

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Assessing models of speciation under different biogeographic scenarios; an empirical study using multi‐locus and RNA ‐seq analyses

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A novel method of caenophidian snake sex identification using molecular markers based on two gametologous genes

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Phylogenetic and morphological influence on habitat choice in moisture‐harvesting horned lizards (Phrynosoma spp.)

inferred← citeshttps://doi.org/10.1002/jez.472openalex-snapshot

Horned lizards (Phrynosoma) incapacitate dangerous ant prey with mucus

inferred← citeshttps://doi.org/10.1007/s00239-009-9207-8openalex-snapshot

Molecular Organization and Evolution of 5S rDNA in the Genus Merluccius and Their Phylogenetic Implications

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A novel metaheuristic inspired by horned lizard defense tactics

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The Evolution of Positive Allometry of Weaponry in Horned Lizards (Phrynosoma)

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Shape Variation in the Dermatocranium of the Greater Short-Horned Lizard Phrynosoma hernandesi (Reptilia: Squamata: Phrynosomatidae)

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Bibliography

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Phylogenomic insights into the taxonomy and evolutionary relationships of penduline tits (Remiz spp.)

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Phylogenesis of brain-derived neurotrophic factor (BDNF) in vertebrates

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Thermoregulation of two sympatric species of horned lizards in the Chihuahuan Desert and their local extinction risk

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Phylogeographic structure and historical demography of the western diamondback rattlesnake (Crotalus atrox): A perspective on North American desert biogeography

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Phylogenetic relationships and heterogeneous evolutionary processes among phrynosomatine sand lizards (Squamata, Iguanidae) revisited

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Biogeography and evolution of body size and life history of African frogs: Phylogeny of squeakers (Arthroleptis) and long-fingered frogs (Cardioglossa) estimated from mitochondrial data

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Multigene analysis of phylogenetic relationships and divergence times of primate sucking lice (Phthiraptera: Anoplura)

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Incongruent gene trees, complex evolutionary processes, and the phylogeny of a group of North American minnows (Hybognathus Agassiz 1855)

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Length variation in the N-terminal domain of the recombination-activating gene 1 (RAG1) across squamates

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Species trees for spiny lizards (Genus Sceloporus): Identifying points of concordance and conflict between nuclear and mitochondrial data

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Phylogenetic relationships of phrynosomatid lizards based on nuclear and mitochondrial data, and a revised phylogeny for Sceloporus

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Complex patterns of continental speciation: Molecular phylogenetics and biogeography of sub-Saharan puddle frogs (Phrynobatrachus)

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Incorporating molecular phylogenetics with larval morphology while mitigating the effects of substitution saturation on phylogeny estimation: A new hypothesis of relationships for the flatfish family Pleuronectidae (Percomorpha: Pleuronectiformes)

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Comparison of phylogeographic structure and population history of two Phrynocephalus species in the Tarim Basin and adjacent areas

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Phylogenetic relationships in the spoon tarsus subgroup of Hawaiian drosophila: Conflict and concordance between gene trees

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Evidence of hybridization in the Argentinean lizards Liolaemus gracilis and Liolaemus bibronii (IGUANIA: LIOLAEMINI): An integrative approach based on genes and morphology

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Phylogeny, biogeography, and display evolution in the tree and brush lizard genus Urosaurus (Squamata: Phrynosomatidae)

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Diversification in the Mexican horned lizard Phrynosoma orbiculare across a dynamic landscape

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A molecular phylogeny of the lizard genus Phymaturus (Squamata, Liolaemini): Implications for species diversity and historical biogeography of southern South America

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Testing monophyly without well-supported gene trees: Evidence from multi-locus nuclear data conflicts with existing taxonomy in the snake tribe Thamnophiini

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Mitochondrial introgression via ancient hybridization, and systematics of the Australian endemic pygopodid gecko genus Delma

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Do genes lie? Mitochondrial capture masks the Red Sea collector urchin’s true identity (Echinodermata: Echinoidea: Tripneustes)

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Expected pairwise congruence among gene trees under the coalescent model

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Species delimitation of the blue-spotted spiny lizard within a multilocus, multispecies coalescent framework, results in the recognition of a new Sceloporus species

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Phylogenomic evidence for a recent and rapid radiation of lizards in the Patagonian Liolaemus fitzingerii species group

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A taxonomic conundrum: Characterizing a cryptic radiation of Asian gracile skinks (Squamata: Scincidae: Riopa) in Myanmar

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How mitonuclear discordance and geographic variation have confounded species boundaries in a widely studied snake

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Isolation and divergence of Greater Earless Lizards (Phrynosomatidae: Cophosaurus) in western North America support multiple diversification processes and a complex demographic history

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Rock-dwelling lizards exhibit less sensitivity of sprint speed to increases in substrate rugosity

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Comparative venom-gland transcriptomics and venom proteomics of four Sidewinder Rattlesnake (Crotalus cerastes) lineages reveal little differential expression despite individual variation

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Mitogenomics of historical type specimens of Australasian turtles: clarification of taxonomic confusion and old mitochondrial introgression

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The Andaman day gecko paradox: an ancient endemic without pronounced phylogeographic structure

inferred← citeshttps://doi.org/10.1038/s42003-018-0176-6openalex-snapshot

Incomplete lineage sorting rather than hybridization explains the inconsistent phylogeny of the wisent

inferred← citeshttps://doi.org/10.1051/alr/2020027openalex-snapshot

Genetic variation of Parapenaeopsis sculptilis (Decapoda, Penaeidae) and reassessment of the phylogenetic relationships within the genus Parapenaeopsis based on mitochondrial DNA variation

inferred← citeshttps://doi.org/10.1073/pnas.0906380106openalex-snapshot

Quantifying ecological, morphological, and genetic variation to delimit species in the coast horned lizard species complex ( Phrynosoma )

inferred← citeshttps://doi.org/10.1080/03949370.2022.2082538openalex-snapshot

Escaping from predators: a review of Neotropical lizards defence traits

inferred← citeshttps://doi.org/10.1080/10635150701618527openalex-snapshot

Molecular Phylogenetics of the Lizard Genus Microlophus (Squamata:Tropiduridae): Aligning and Retrieving Indel Signal from Nuclear Introns

inferred← citeshttps://doi.org/10.1080/24701394.2016.1275601openalex-snapshot

DNA barcoding revises a misidentification on mossy frog: new record and distribution extension of Theloderma corticale Boulenger, 1903 (Amphibia: Anura: Rhacophoridae)

inferred← citeshttps://doi.org/10.1093/condor/duz029openalex-snapshot

Archival DNA reveals cryptic biodiversity within the Spotted Shag (Phalacrocorax punctatus) from New Zealand

inferred← citeshttps://doi.org/10.1093/czoolo/61.1.155openalex-snapshot

Are genetically distinct lizard species able to hybridize? A review

inferred← citeshttps://doi.org/10.1093/evolinnean/kzae007openalex-snapshot

What’s in a name? Using species delimitation to inform conservation practice for Chinese giant salamanders (Andrias spp.)

inferred← citeshttps://doi.org/10.1093/gbe/evab260openalex-snapshot

Genome-Scale Data Reveal Deep Lineage Divergence and a Complex Demographic History in the Texas Horned Lizard (Phrynosoma cornutum) throughout the Southwestern and Central United States

inferred← citeshttps://doi.org/10.1093/gbe/evv026openalex-snapshot

Phylogenomics of Phrynosomatid Lizards: Conflicting Signals from Sequence Capture versus Restriction Site Associated DNA Sequencing

inferred← citeshttps://doi.org/10.1093/jhered/est039openalex-snapshot

Biogeographic Determinants of Genetic Diversification in the Mouse Opossum Gracilinanus agilis (Didelphimorphia: Didelphidae)

inferred← citeshttps://doi.org/10.1093/sysbio/syp005openalex-snapshot

Conflicting Mitochondrial and Nuclear Phylogenies for the Widely Disjunct Emys (Testudines: Emydidae) Species Complex, and What They Tell Us about Biogeography and Hybridization

inferred← citeshttps://doi.org/10.1093/sysbio/syp057openalex-snapshot

Species Tree Discordance Traces to Phylogeographic Clade Boundaries in North American Fence Lizards (Sceloporus)

inferred← citeshttps://doi.org/10.1093/sysbio/syr011openalex-snapshot

Inferring Species-Level Phylogenies and Taxonomic Distinctiveness Using Multilocus Data in Sistrurus Rattlesnakes

inferred← citeshttps://doi.org/10.1093/sysbio/syt069openalex-snapshot

Species Delimitation Using Bayes Factors: Simulations and Application to the Sceloporus scalaris Species Group (Squamata: Phrynosomatidae)

inferred← citeshttps://doi.org/10.1093/sysbio/syv053openalex-snapshot

Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies

inferred← citeshttps://doi.org/10.1093/zoolinnean/zlad082openalex-snapshot

Hiding in the mists: molecular phylogenetic position and description of a new genus and species of snake (Dipsadidae: Xenodontinae) from the remote cloud forest of the Lost World

inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaf059openalex-snapshot

Evolutionary history of the Altai grey vole, Microtus obscurus (Rodentia: Cricetidae), reconstructed using modern and ancient genomes

inferred← citeshttps://doi.org/10.1098/rspb.2011.0720openalex-snapshot

Latitude, elevational climatic zonation and speciation in New World vertebrates

inferred← citeshttps://doi.org/10.1098/rspb.2025.2377openalex-snapshot

Cryptic species are widespread across vertebrates

inferred← citeshttps://doi.org/10.1101/2021.02.05.429853openalex-snapshot

Ancient genomes reveal hybridisation between extinct short-faced bears and the extant spectacled bear ( Tremarctos ornatus )

inferred← citeshttps://doi.org/10.1101/2025.09.25.678555openalex-snapshot

Genome-wide signatures of reproductive isolation shape the varied genomic landscape of the roundtail horned lizard ( Phrynosoma modestum )

inferred← citeshttps://doi.org/10.1111/1755-0998.12658openalex-snapshot

Cryptic diversity and discordance in single‐locus species delimitation methods within horned lizards (Phrynosomatidae: Phrynosoma )

inferred← citeshttps://doi.org/10.1111/1755-0998.12970openalex-snapshot

Cryptic diversity in the Mexican highlands: Thousands of UCE loci help illuminate phylogenetic relationships, species limits and divergence times of montane rattlesnakes (Viperidae: Crotalus)

inferred← citeshttps://doi.org/10.1111/azo.12454openalex-snapshot

The veritable horns of a dilemma: Assessing homology of the parietal and squamosal asperities of Phrynosoma (Squamata: Iguania: Phrynosomatidae)

inferred← citeshttps://doi.org/10.1111/bij.12172openalex-snapshot

Phylogeography of the Trans-Volcanic bunchgrass lizard (Sceloporus bicanthalis) across the highlands of south-eastern Mexico

inferred← citeshttps://doi.org/10.1111/bij.12367openalex-snapshot

Multiple origins of parthenogenesis, and a revised species phylogeny for the Southeast Asian butterfly lizards,Leiolepis

inferred← citeshttps://doi.org/10.1111/bij.12558openalex-snapshot

Diversification of North American natricine snakes

inferred← citeshttps://doi.org/10.1111/bij.12626openalex-snapshot

Phylogeography and lineage-specific patterns of genetic diversity and molecular evolution in a group of North American skinks

inferred← citeshttps://doi.org/10.1111/btp.12970openalex-snapshot

Integration of genetic structure into conservation of an endangered, endemic lizard, Ceratophora aspera: A case study from Sri Lanka

inferred← citeshttps://doi.org/10.1111/geb.12053openalex-snapshot

Are lizards feeling the heat? A tale of ecology and evolution under two temperatures

inferred← citeshttps://doi.org/10.1111/j.1096-3642.2012.00866.xopenalex-snapshot

Molecular systematics and evolution of the subgenusMesocarabusThomson, 1875 (Coleoptera: Carabidae:Carabus), based on mitochondrial and nuclear DNA

inferred← citeshttps://doi.org/10.1111/j.1365-2699.2011.02485.xopenalex-snapshot

Discordant patterns of geographic variation between mitochondrial and microsatellite markers in the Mexican black iguana (Ctenosaura pectinata) in a contact zone

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2006.02892.xopenalex-snapshot

Phylogeography of the flat‐tailed horned lizard (Phrynosoma mcallii) and systematics of the P. mcallii–platyrhinos mtDNA complex

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2007.03496.xopenalex-snapshot

Multi‐locus DNA sequence data reveal a history of deep cryptic vicariance and habitat‐driven convergence in the desert night lizard Xantusia vigilis species complex (Squamata: Xantusiidae)

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2007.03556.xopenalex-snapshot

Phylogeny, divergence times and species limits of spiny lizards (Sceloporus magisterspecies group) in western North American deserts and Baja California

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2008.03826.xopenalex-snapshot

Diversification in the northern neotropics: mitochondrial and nuclear DNA phylogeography of the iguana Ctenosaura pectinata and related species

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2009.04202.xopenalex-snapshot

Nuclear sequences reveal mid‐range isolation of an imperilled deep‐water coral population

inferred← citeshttps://doi.org/10.1111/j.1420-9101.2009.01779.xopenalex-snapshot

Assessing concurrent patterns of environmental niche and morphological evolution among species of horned lizards (Phrynosoma)

inferred← citeshttps://doi.org/10.1111/j.1466-8238.2011.00700.xopenalex-snapshot

The ecology of lizard reproductive output

inferred← citeshttps://doi.org/10.1111/j.1469-7998.2008.00460.xopenalex-snapshot

Continental speciation in the tropics: contrasting biogeographic patterns of divergence in the Uroplatus leaf‐tailed gecko radiation of Madagascar

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2007.00239.xopenalex-snapshot

MITOCHONDRIAL INTROGRESSION AND INCOMPLETE LINEAGE SORTING THROUGH SPACE AND TIME: PHYLOGENETICS OF CROTAPHYTID LIZARDS

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2008.00534.xopenalex-snapshot

DIRECTIONAL EVOLUTION OF STOCKINESS COEVOLVES WITH ECOLOGY AND LOCOMOTION IN LIZARDS

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2009.00935.xopenalex-snapshot

ALTERNATE PATHWAYS OF BODY SHAPE EVOLUTION TRANSLATE INTO COMMON PATTERNS OF LOCOMOTOR EVOLUTION IN TWO CLADES OF LIZARDS

inferred← citeshttps://doi.org/10.1111/jbi.13114openalex-snapshot

Pleistocene climatic fluctuations drive isolation and secondary contact in the red diamond rattlesnake ( Crotalus ruber ) in Baja California

inferred← citeshttps://doi.org/10.1111/jbi.14115openalex-snapshot

Community phylogeographic patterns reveal how a barrier filters and structures taxa in North American warm deserts

inferred← citeshttps://doi.org/10.1111/joa.12746openalex-snapshot

The evolution of bite force in horned lizards: the influence of dietary specialization

inferred← citeshttps://doi.org/10.1111/maec.12653openalex-snapshot

Mitochondrial DNA variation of Metapenaeus monoceros (Decapoda, Penaeidae) reveals high genetic variation within Bangladesh with distinct lineages in the Indian Ocean

inferred← citeshttps://doi.org/10.1111/mec.13479openalex-snapshot

Hybridization promotes speciation in Coenonympha butterflies

inferred← citeshttps://doi.org/10.1111/mec.14295openalex-snapshot

Geographical features are the predominant driver of molecular diversification in widely distributed North American whipsnakes

inferred← citeshttps://doi.org/10.1111/mec.16070openalex-snapshot

The effects of climate and demographic history in shaping genomic variation across populations of the Desert Horned Lizard (Phrynosoma platyrhinos)

inferred← citeshttps://doi.org/10.1111/mec.16872openalex-snapshot

Organellar DNA continues to provide a rich source of information in the genomics era

inferred← citeshttps://doi.org/10.1111/mec.17308openalex-snapshot

Population genomics of flat‐tailed horned lizards (Phrynosoma mcallii) informs conservation and management across a fragmented Colorado Desert landscape

inferred← citeshttps://doi.org/10.1111/syen.12393openalex-snapshot

Single nucleotide polymorphism‐based species phylogeny of greater fritillary butterflies (Lepidoptera: Nymphalidae: Speyeria ) demonstrates widespread mitonuclear discordance

inferred← citeshttps://doi.org/10.1111/zoj.12169openalex-snapshot

The role of mitochondrial introgression in illuminating the evolutionary history of Nearctic treefrogs

inferred← citeshttps://doi.org/10.1111/zsc.12349openalex-snapshot

Phylogenetic relationships in the Sceloporus variabilis (Squamata: Phrynosomatidae) complex based on three molecular markers, continuous characters and geometric morphometric data

inferred← citeshttps://doi.org/10.1134/s0026893313010056openalex-snapshot

The problems of molecular phylogenetics with the example of squamate reptiles: Mitochondrial DNA markers

inferred← citeshttps://doi.org/10.1139/cjz-2014-0079openalex-snapshot

Genetic structure of the endangered Greater Short-horned Lizard (Phrynosomahernandesi) in Canada: evidence from mitochondrial and nuclear genes

inferred← citeshttps://doi.org/10.1159/000304050openalex-snapshot

Chromosome Variation, Genomics, Speciation and Evolution in Sceloporus Lizards

inferred← citeshttps://doi.org/10.11646/zootaxa.2027.1.2openalex-snapshot

Molecular phylogenetics and taxonomy of leaf-toed geckos (Phyllodactylidae: Phyllodactylus) inhabiting the peninsula of Baja California

inferred← citeshttps://doi.org/10.11646/zootaxa.3391.1.1openalex-snapshot

A new species of chameleon (Squamata: Chamaeleonidae) from the Aberdare Mountains in the central highlands of Kenya

inferred← citeshttps://doi.org/10.1186/1471-2148-10-58openalex-snapshot

Evolutionary history of anglerfishes (Teleostei: Lophiiformes): a mitogenomic perspective

inferred← citeshttps://doi.org/10.1186/1471-2148-11-170openalex-snapshot

Phylogeography and demographic history of Lacerta lepida in the Iberian Peninsula: multiple refugia, range expansions and secondary contact zones

inferred← citeshttps://doi.org/10.1186/1471-2148-12-14openalex-snapshot

Evolutionary history of the genus Tarentola (Gekkota: Phyllodactylidae) from the Mediterranean Basin, estimated using multilocus sequence data

inferred← citeshttps://doi.org/10.1206/3852.1openalex-snapshot

A NewTropidurus(Tropiduridae) from the Semiarid Brazilian Caatinga: Evidence for Conflicting Signal between Mitochondrial and Nuclear Loci Affecting the Phylogenetic Reconstruction of South American Collared Lizards

inferred← citeshttps://doi.org/10.13128/acta_herpetol-2483openalex-snapshot

Phylogenetic relationships of geckos of the genus Nactus and their relatives (Squamata: Gekkonidae)

inferred← citeshttps://doi.org/10.1371/journal.pone.0166292openalex-snapshot

Ancient Mitochondrial Capture as Factor Promoting Mitonuclear Discordance in Freshwater Fishes: A Case Study in the Genus Squalius (Actinopterygii, Cyprinidae) in Greece

inferred← citeshttps://doi.org/10.1371/journal.pone.0238194openalex-snapshot

Phylogeographic structure of the dunes sagebrush lizard, an endemic habitat specialist

inferred← citeshttps://doi.org/10.1371/journal.pone.0339275openalex-snapshot

Isolated dwarfism and sexual dimorphism in a mainland population of the greater short-horned lizard (Phrynosoma hernandesi) and the Great Plains toad (Anaxyrus cognatus)

inferred← citeshttps://doi.org/10.1515/cppm-2025-0019openalex-snapshot

Classification of water quality based on aesthetic and chemical parameters

inferred← citeshttps://doi.org/10.1641/b580405openalex-snapshot

Systematics and Herpetology in the Age of Genomics

inferred← citeshttps://doi.org/10.1643/ch-09-129openalex-snapshot

A New Species of Snake in the Genus Contia (Squamata: Colubridae) from California and Oregon

inferred← citeshttps://doi.org/10.1643/ch-10-058openalex-snapshot

Molecular Systematics of the Leptodeirini (Colubroidea: Dipsadidae) Revisited: Species-tree Analyses and Multi-locus Data

inferred← citeshttps://doi.org/10.1643/ch-15-248openalex-snapshot

Phylogenomics of Horned Lizards (Genus:Phrynosoma) Using Targeted Sequence Capture Data

inferred← citeshttps://doi.org/10.1643/cp-18-158openalex-snapshot

Predator–Prey Battle of Ecological Icons: Horned Lizards (Phrynosoma spp.) and Harvester Ants (Pogonomyrmex spp.)

inferred← citeshttps://doi.org/10.1643/h2021082openalex-snapshot

Contemporary Methods and Evidence for Species Delimitation

inferred← citeshttps://doi.org/10.1643/h2021139openalex-snapshot

Antipredator Blood-Squirting Defense in Horned Lizards (Phrynosoma): Chemical Isolation of Plasma Component(s), Pogonomyrmex Ant Dietary Origin, and Evolution

inferred← citeshttps://doi.org/10.1655/08-031r1.1openalex-snapshot

Taxonomic Freedom and the Role of Official Lists of Species Names

inferred← citeshttps://doi.org/10.1655/herpetologica-d-13-00077openalex-snapshot

A New Species of Horned Lizard (GenusPhrynosoma) from Guerrero, México, with an Updated Multilocus Phylogeny

inferred← citeshttps://doi.org/10.1655/herpetologica-d-13-00083openalex-snapshot

Molecular Phylogeny of the Liolaemus kriegi Complex (Iguania, Liolaemini)

inferred← citeshttps://doi.org/10.1655/herpetologica-d-17-00028.1openalex-snapshot

Antipredator Nest Guarding by Female Horned Lizards ( Phrynosoma ): Iguanian Parental Care

inferred← citeshttps://doi.org/10.1670/07-072r1.1openalex-snapshot

Antipredator Responses by Texas Horned Lizards to Two Snake Taxa with Different Foraging and Subjugation Strategies

inferred← citeshttps://doi.org/10.1670/18-072openalex-snapshot

Using Road Surveys and N-Mixture Models to Estimate the Abundance of a Cryptic Lizard Species

inferred← citeshttps://doi.org/10.1894/0038-4909-58.4.459openalex-snapshot

Taxonomic Assessment of the Subspecific Status ofPhrynosoma orbiculare(Sauria: Phrynosomatidae) In the Southern Portion of Its Distribution

inferred← citeshttps://doi.org/10.1894/0038-4909-65.1.50openalex-snapshot

BLOOD-SQUIRT OCCURRENCE IN THE MEXICAN PLATEAU HORNED LIZARD (PHRYNOSOMA ORBICULARE)

inferred← citeshttps://doi.org/10.1894/0038-4909-67.2.149openalex-snapshot

RAIN-HARVEST DRINKING BY PHRYNOSOMA DITMARSI IN SONORA, MEXICO

inferred← citeshttps://doi.org/10.1894/0038-4909-67.2.152openalex-snapshot

DEFENSIVE HORN RAISING BY HORNED LIZARDS (PHRYNOSOMA): A UNIQUE BEHAVIORAL RESPONSE IN PHRYNOSOMATID LIZARDS?

inferred← citeshttps://doi.org/10.1894/0038-4909-68.2.75openalex-snapshot

NATURAL HISTORY PATTERNS AND REPRODUCTIVE CYCLE OF AN ENDEMIC HORNED LIZARD (PHRYNOSOMA DITMARSI) IN SONORA, MEXICO

inferred← citeshttps://doi.org/10.1894/0038-4909-69.4.7openalex-snapshot

ANTIPREDATOR BLOOD-SQUIRTING AND SEED-HARVESTING ANTS (POGONOMYRMEX) IN THE EVOLUTION OF MYMECOPHAGY IN HORNED LIZARDS (PHRYNOSOMA)

inferred← citeshttps://doi.org/10.1898/nwn09-05.1openalex-snapshot

Ecology of the Pygmy Short-Horned Lizard [Phrynosoma (Tapaja) douglasii] in Washington

inferred← citeshttps://doi.org/10.22201/ib.20078706e.2018.1.1925openalex-snapshot

Masa relativa de la camada en Phrynosoma orbiculare (Squamata: Phrynosomatidae) en el Parque Estatal Sierra Morelos, Toluca, Estado de México

inferred← citeshttps://doi.org/10.23880/izab-16000569openalex-snapshot

Molecular Markers and Taxonomic Explosion in Herpetology: More or Less Robust Taxonomy? True and False Advantages of DNA Markers

inferred← citeshttps://doi.org/10.26686/wgtn.17064731openalex-snapshot

Phylogeography of the New Zealand whelks Cominella maculosa and C. virgata

inferred← citeshttps://doi.org/10.26686/wgtn.17064731.v1openalex-snapshot

Phylogeography of the New Zealand whelks Cominella maculosa and C. virgata

inferred← citeshttps://doi.org/10.29057/icbi.v11i21.10743openalex-snapshot

Determinación de áreas prioritarias de conservación para el género Phrynosoma

inferred← citeshttps://doi.org/10.2984/1534-6188(2008)62[351:mpotef]2.0.co;2openalex-snapshot

Molecular Phylogeography of the Endemic Five-lined Skink (Plestiodon marginatus) (Reptilia: Scincidae) of the Ryukyu Archipelago, Japan, with Special Reference to the Relationship of a Northern Tokara Population1

inferred← citeshttps://doi.org/10.3109/19401736.2013.770488openalex-snapshot

Genetic variability of the tokay gecko based on mitochondrial and nuclear DNA

inferred← citeshttps://doi.org/10.3109/19401736.2014.1003826openalex-snapshot

The complete mitochondrial genome of the black-tailed brush lizard Urosaurus nigricaudus (Reptilia, Squamata, Phrynosomatidae)

inferred← citeshttps://doi.org/10.3109/19401736.2014.880887openalex-snapshot

DNA barcoding revises a misidentification on musk deer

inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.1457openalex-snapshot

Molecular phylogenetics of the North American snake tribe Thamnophiini

inferred← citeshttps://doi.org/10.3389/fevo.2021.678110openalex-snapshot

Phylogenomic Assessment of Biodiversity Using a Reference-Based Taxonomy: An Example With Horned Lizards (Phrynosoma)

inferred← citeshttps://doi.org/10.3390/taxonomy1020009openalex-snapshot

Taxonomy of Horned Lizards, Genus Phrynosoma (Squamata, Phrynosomatidae)

inferred← citeshttps://doi.org/10.34917/2817915openalex-snapshot

Historical diversification of montane herpetofauna within and between the sierras of Mexico

inferred← citeshttps://doi.org/10.3996/122014-jfwm-093openalex-snapshot

Genetic Structure is Inconsistent with Subspecies Designations in the Western Massasauga Sistrurus tergeminus

inferred← citeshttps://doi.org/10.5204/thesis.eprints.116286openalex-snapshot

On the Evolution of Kangaroos and their Kin (Family Macropodidae) Using Retrotransposons, Nuclear Genes and Whole Mitochondrial Genomes

inferred← citeshttps://doi.org/10.5735/086.051.0306openalex-snapshot

Natural Hybridization in Lizards of the GenusTupinambis(Teiidae) in the Southernmost Contact Zone of their Distribution Range

inferred← citeshttps://doi.org/10.6026/97320630009755openalex-snapshot

Comparative insights using the molecular homology model of BDNF (Brain derived neurotrophic factor) of Varanus komodoensis and the known NGF (Nerve growth factor) structure of Naja atra

inferred← citeshttps://doi.org/10.7287/peerj.6744v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Introgressive hybridization in a Spiny-Tailed Iguana, Ctenosaura pectinata, and its implications for taxonomy and conservation (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.6744v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Introgressive hybridization in a Spiny-Tailed Iguana, Ctenosaura pectinata, and its implications for taxonomy and conservation (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.6744v0.2/reviews/2openalex-snapshot

Peer Review #2 of "Introgressive hybridization in a Spiny-Tailed Iguana, Ctenosaura pectinata, and its implications for taxonomy and conservation (v0.2)"

inferred← citeshttps://doi.org/10.7550/rmb.32119openalex-snapshot

Biogeografía de la Zona de Transición Mexicana con base en un análisis de árboles reconciliados

inferred← citeshttps://doi.org/10.7717/peerj.6744openalex-snapshot

Introgressive hybridization in a Spiny-Tailed Iguana, Ctenosaura pectinata , and its implications for taxonomy and conservation

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.