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Species Tree Discordance Traces to Phylogeographic Clade Boundaries in North American Fence Lizards (Sceloporus)

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/tax.562013openalex-snapshot

Concordance trees, concordance factors, and the exploration of reticulate genealogy

inferredcites →https://doi.org/10.1007/bf02101694openalex-snapshot

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

inferredcites →https://doi.org/10.1007/s10709-008-9293-3openalex-snapshot

Multilocus phylogeography and phylogenetics using sequence-based markers

inferredcites →https://doi.org/10.1016/j.ympev.2005.12.016openalex-snapshot

Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: Evidence for a misleading mitochondrial gene tree

inferredcites →https://doi.org/10.1016/j.ympev.2008.09.008openalex-snapshot

Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow

inferredcites →https://doi.org/10.1016/s0169-5347(00)02026-7openalex-snapshot

Intraspecific gene genealogies: trees grafting into networks

inferredcites →https://doi.org/10.1016/s0169-5347(03)00018-1openalex-snapshot

The utility of single nucleotide polymorphisms in inferences of population history

inferredcites →https://doi.org/10.1038/nature02053openalex-snapshot

Genome-scale approaches to resolving incongruence in molecular phylogenies

inferredcites →https://doi.org/10.1073/pnas.0607004104openalex-snapshot

High-resolution species trees without concatenation

inferredcites →https://doi.org/10.1080/106351502753475871openalex-snapshot

Molecular Systematics of the Eastern Fence Lizard (Sceloporus undulatus): A Comparison of Parsimony, Likelihood, and Bayesian Approaches

inferredcites →https://doi.org/10.1080/10635150390192717openalex-snapshot

Sampling Strategies for Delimiting Species: Genes, Individuals, and Populations in the Liolaemus elongatus-kriegi Complex (Squamata: Liolaemidae) in Andean-Patagonian South America

inferredcites →https://doi.org/10.1080/10635150500354928openalex-snapshot

Inferring Phylogeny Despite Incomplete Lineage Sorting

inferredcites →https://doi.org/10.1080/10635150600863109openalex-snapshot

Incorporating Allelic Variation for Reconstructing the Evolutionary History of Organisms from Multiple Genes: An Example from Rosa in North America

inferredcites →https://doi.org/10.1080/10635150601146041openalex-snapshot

Inconsistency of Phylogenetic Estimates from Concatenated Data under Coalescence

inferredcites →https://doi.org/10.1080/10635150701429982openalex-snapshot

Species Trees from Gene Trees: Reconstructing Bayesian Posterior Distributions of a Species Phylogeny Using Estimated Gene Tree Distributions

inferredcites →https://doi.org/10.1080/10635150802044011openalex-snapshot

Multilocus Phylogenetics of a Rapid Radiation in the Genus Thomomys (Rodentia: Geomyidae)

inferredcites →https://doi.org/10.1080/10635150802302443openalex-snapshot

An Integrative Method for Delimiting Cohesion Species: Finding the Population-Species Interface in a Group of Californian Trapdoor Spiders with Extreme Genetic Divergence and Geographic Structuring

inferredcites →https://doi.org/10.1080/10635150802422290openalex-snapshot

Comparison of Species Tree Methods for Reconstructing the Phylogeny of Bearded Manakins (Aves: Pipridae, Manacus) from Multilocus Sequence Data

inferredcites →https://doi.org/10.1086/379378openalex-snapshot

A Comparison of Bayesian Methods for Haplotype Reconstruction from Population Genotype Data

inferredcites →https://doi.org/10.1093/bioinformatics/16.2.130openalex-snapshot

TOPAL 2.0: improved detection of mosaic sequences within multiple alignments

inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot

MrBayes 3: Bayesian phylogenetic inference under mixed models

inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

inferredcites →https://doi.org/10.1093/bioinformatics/btm388openalex-snapshot

AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics

inferredcites →https://doi.org/10.1093/bioinformatics/btn556openalex-snapshot

AUGIST: inferring species trees while accommodating gene tree uncertainty

inferredcites →https://doi.org/10.1093/molbev/msh018openalex-snapshot

Neighbor-Net: An Agglomerative Method for the Construction of Phylogenetic Networks

inferredcites →https://doi.org/10.1093/molbev/msj030openalex-snapshot

Application of Phylogenetic Networks in Evolutionary Studies

inferredcites →https://doi.org/10.1093/molbev/msl170openalex-snapshot

Bayesian Estimation of Concordance among Gene Trees

inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot

MUSCLE: multiple sequence alignment with high accuracy and high throughput

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026092openalex-snapshot

Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot

Relationships between gene trees and species trees.

inferredcites →https://doi.org/10.1093/sysbio/38.1.7openalex-snapshot

A Concern for Evidence and a Phylogenetic Hypothesis of Relationships among Epicrates (Boidae, Serpentes)

inferredcites →https://doi.org/10.1093/sysbio/46.3.523openalex-snapshot

Gene Trees in Species Trees

inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03194.xopenalex-snapshot

Hybridization between multiple fence lizard lineages in an ecotone: locally discordant variation in mitochondrial DNA, chromosomes, and morphology

inferredcites →https://doi.org/10.1111/j.1471-8286.2006.01547.xopenalex-snapshot

Anonymous nuclear markers for the eastern fence lizard, Sceloporus undulatus

inferredcites →https://doi.org/10.1111/j.1558-5646.2007.00239.xopenalex-snapshot

MITOCHONDRIAL INTROGRESSION AND INCOMPLETE LINEAGE SORTING THROUGH SPACE AND TIME: PHYLOGENETICS OF CROTAPHYTID LIZARDS

inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00414.xopenalex-snapshot

ESTIMATING SPECIES TREES USING MULTIPLE-ALLELE DNA SEQUENCE DATA

inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00549.xopenalex-snapshot

IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?

inferredcites →https://doi.org/10.1146/annurev.ecolsys.34.011802.132421openalex-snapshot

Species-Level Paraphyly and Polyphyly: Frequency, Causes, and Consequences, with Insights from Animal Mitochondrial DNA

inferredcites →https://doi.org/10.1146/annurev.genom.9.081307.164407openalex-snapshot

Phylogenetic Inference Using Whole Genomes

inferredcites →https://doi.org/10.1371/journal.pgen.0020068openalex-snapshot

Discordance of Species Trees with Their Most Likely Gene Trees

inferredcites →https://doi.org/10.1534/genetics.107.076422openalex-snapshot

Integrating Phylogenetic and Population Genetic Analyses of Multiple Loci to Test Species Divergence Hypotheses in Passerina Buntings

inferredcites →https://doi.org/10.1655/0018-0831(2002)058[0277:grapos]2.0.co;2openalex-snapshot

GENETIC RELATIONSHIPS AMONG POPULATIONS OF SCELOPORUS UNDULATUS FAIL TO SUPPORT PRESENT SUBSPECIFIC DESIGNATIONS

inferredcites →https://doi.org/10.2307/1467007openalex-snapshot

Phylogeny of the Spiny Lizards (Sceloporus) Based on Molecular and Morphological Evidence

inferredcites →https://doi.org/10.3417/0026-6493(2006)93[8:pwspap]2.0.co;2openalex-snapshot

PROBLEMS WITH SPECIES: PATTERNS AND PROCESSES OF SPECIES FORMATION IN SALAMANDERS1

inferredcites →https://doi.org/10.3724/sp.j.1002.2008.08016openalex-snapshot

Taxon sampling and the accuracy of phylogenetic analyses

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Genotyping validates the efficacy of photographic identification in a capture‐mark‐recapture study based on the head scale patterns of the prairie lizard (Sceloporus consobrinus)

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Latitudinal Clines in an Ectothermic Vertebrate: Patterns in Body Size, Growth Rate, and Reproductive Effort Suggest Countergradient Responses in the Prairie Lizard

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Occurrence data uncover patterns of allopatric divergence and interspecies interactions in the evolutionary history of Sceloporus lizards

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Diminishing returns limit energetic costs of climate change

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Shared and unique responses in the microbiome of allopatric lizards reared in a standardized environment

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Morphological features of the yolk processing pattern in the eastern fence lizard, Sceloporus undulatus (Phrynosomatidae)

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The Dynamic Discipline of Species Delimitation: Progress Toward Effectively Recognizing Species Boundaries in Natural Populations

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Native predator eats invasive toxic prey: evidence for increased incidence of consumption rather than aversion-learning

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Evaluation of traditionally circumscribed species in the lichen-forming genus Usnea, section Usnea (Parmeliaceae, Ascomycota) using a six-locus dataset

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Ultrastructural analysis of spermiogenesis in the Eastern Fence Lizard, Sceloporus undulatus (Squamata: Phrynosomatidae)

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Species trees for spiny lizards (Genus Sceloporus): Identifying points of concordance and conflict between nuclear and mitochondrial data

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Multilocus analysis of a taxonomically densely sampled dataset reveal extensive non-monophyly in the avian family Locustellidae

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Nuclear–mitochondrial discordance and gene flow in a recent radiation of toads

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Lizards from the end of the world: Phylogenetic relationships of the Liolaemus lineomaculatus section (Squamata: Iguania: Liolaemini)

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A multigenic perspective on phylogenetic relationships in the largest family of salamanders, the Plethodontidae

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Complex patterns of speciation in cosmopolitan “rock posy” lichens – Discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota)

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Species tree inference in a recent radiation of orioles (Genus Icterus): Multiple markers and methods reveal cytonuclear discordance in the northern oriole group

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Evidence of hybridization in the Argentinean lizards Liolaemus gracilis and Liolaemus bibronii (IGUANIA: LIOLAEMINI): An integrative approach based on genes and morphology

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Phylogeny, biogeography, and display evolution in the tree and brush lizard genus Urosaurus (Squamata: Phrynosomatidae)

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Multilocus phylogeny and species delimitation within the Natterer’s bat species complex in the Western Palearctic

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Molecular phylogeny of African bush-shrikes and allies: Tracing the biogeographic history of an explosive radiation of corvoid birds

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The effects of sampling on delimiting species from multi-locus sequence data

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Molecular phylogeny of extant equids and effects of ancestral polymorphism in resolving species-level phylogenies

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Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): Insights on diversity, distributions, and a comparison of species tree and concatenated topologies

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Sampling strategies for species trees: The effects on phylogenetic inference of the number of genes, number of individuals, and whether loci are mitochondrial, sex-linked, or autosomal

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Multi-locus species tree for the Amazonian peacock basses (Cichlidae: Cichla): Emergent phylogenetic signal despite limited nuclear variation

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Aridification driven diversification of fan-throated lizards from the Indian subcontinent

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Multilocus phylogeny, species age and biogeography of the Lesser Antillean anoles

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Phylogenomic data reveal reticulation and incongruence among mitochondrial candidate species in Dusky Salamanders (Desmognathus)

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Phylogenomics reveal recent Origins and paraphyletic relationships of the Mexican horned pitvipers (Ophryacus and Mixcoatlus)

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Evaluating evolutionary history in the face of high gene tree discordance in Australian Gehyra (Reptilia: Gekkonidae)

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Bayesian species delimitation using multilocus sequence data

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Sequence-based species delineation and molecular phylogenetics of the transitional Nearctic–Neotropical grasshopper genusTaeniopoda(Orthoptera, Romaleidae)

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Molecular Evolution

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.002.0003openalex-snapshot

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.002.0004openalex-snapshot

Foreword

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.002.0005openalex-snapshot

Preface

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0001openalex-snapshot

Models of nucleotide substitution

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0002openalex-snapshot

Models of amino acid and codon substitution

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0003openalex-snapshot

Phylogeny reconstruction: overview

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0004openalex-snapshot

Maximum likelihood methods

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0005openalex-snapshot

Comparison of phylogenetic methods and tests on trees

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0006openalex-snapshot

Bayesian theory

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0007openalex-snapshot

Bayesian computation (MCMC)

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0008openalex-snapshot

Bayesian phylogenetics

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0009openalex-snapshot

Coalescent theory and species trees

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0010openalex-snapshot

Molecular clock and estimation of species divergence times

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0011openalex-snapshot

Neutral and adaptive protein evolution

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0012openalex-snapshot

Simulating molecular evolution

inferred← citeshttps://doi.org/10.1093/acprof:oso/9780199602605.003.0013openalex-snapshot

Appendices

inferred← citeshttps://doi.org/10.1093/biolinnean/blw043openalex-snapshot

Inter- and intraspecific variation in sperm morphology of Sceloporus consobrinus and Sceloporus undulatus (Squamata: Phrynosomatidae)

inferred← citeshttps://doi.org/10.1093/conphys/cot018openalex-snapshot

Heat tolerance during embryonic development has not diverged among populations of a widespread species (Sceloporus undulatus)

inferred← citeshttps://doi.org/10.1093/cz/zoz002openalex-snapshot

Genetic variation and cryptic lineage diversity of the Nigerian red-headed rock agama Agama agama associate with eco-geographic zones

inferred← citeshttps://doi.org/10.1093/gbe/evt186openalex-snapshot

Comparative Species Divergence across Eight Triplets of Spiny Lizards (Sceloporus) Using Genomic Sequence Data

inferred← citeshttps://doi.org/10.1093/gigascience/giab066openalex-snapshot

A chromosome-level genome assembly for the eastern fence lizard ( Sceloporus undulatus ), a reptile model for physiological and evolutionary ecology

inferred← citeshttps://doi.org/10.1093/jhered/est093openalex-snapshot

Rise and Fall of a Hybrid Zone: Implications for the Roles of Aggression, Mate Choice, and Secondary Succession

inferred← citeshttps://doi.org/10.1093/molbev/msp274openalex-snapshot

Bayesian Inference of Species Trees from Multilocus Data

inferred← citeshttps://doi.org/10.1093/molbev/mss008openalex-snapshot

Concatenation and Concordance in the Reconstruction of Mouse Lemur Phylogeny: An Empirical Demonstration of the Effect of Allele Sampling in Phylogenetics

inferred← citeshttps://doi.org/10.1093/obo/9780199941728-0041openalex-snapshot

Phylogeography

inferred← citeshttps://doi.org/10.1093/sysbio/syaa008openalex-snapshot

The Multispecies Coalescent Model Outperforms Concatenation Across Diverse Phylogenomic Data Sets

inferred← citeshttps://doi.org/10.1093/sysbio/syag061openalex-snapshot

Gene Flow Creates Fuzzy Species Boundaries in Fence Lizards

inferred← citeshttps://doi.org/10.1093/sysbio/syq073openalex-snapshot

The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods

inferred← citeshttps://doi.org/10.1093/sysbio/syr003openalex-snapshot

Comparing Two Bayesian Methods for Gene Tree/Species Tree Reconstruction: Simulations with Incomplete Lineage Sorting and Horizontal Gene Transfer

inferred← citeshttps://doi.org/10.1093/sysbio/syr011openalex-snapshot

Inferring Species-Level Phylogenies and Taxonomic Distinctiveness Using Multilocus Data in Sistrurus Rattlesnakes

inferred← citeshttps://doi.org/10.1093/sysbio/syr027openalex-snapshot

Estimating Species Trees from Unrooted Gene Trees

inferred← citeshttps://doi.org/10.1093/sysbio/syr101openalex-snapshot

A Species Tree for the Australo-Papuan Fairy-wrens and Allies (Aves: Maluridae)

inferred← citeshttps://doi.org/10.1093/sysbio/syr105openalex-snapshot

Accuracy and Precision of Species Trees: Effects of Locus, Individual, and Base Pair Sampling on Inference of Species Trees in Lizards of the Liolaemus darwinii Group (Squamata, Liolaemidae)

inferred← citeshttps://doi.org/10.1093/sysbio/syt049openalex-snapshot

The Influence of Gene Flow on Species Tree Estimation: A Simulation Study

inferred← citeshttps://doi.org/10.1093/sysbio/syt057openalex-snapshot

Poor Fit to the Multispecies Coalescent is Widely Detectable in Empirical Data

inferred← citeshttps://doi.org/10.1093/sysbio/syu078openalex-snapshot

The Effects of Inference Method, Population Sampling, and Gene Sampling on Species Tree Inferences: An Empirical Study in Slender Salamanders (Plethodontidae: Batrachoseps)

inferred← citeshttps://doi.org/10.1098/rspb.2015.0837openalex-snapshot

Resolving the life cycle alters expected impacts of climate change

inferred← citeshttps://doi.org/10.1101/136069openalex-snapshot

De novo assembly and annotation of the eastern fence lizard ( Sceloporus undulatus ) transcriptome

inferred← citeshttps://doi.org/10.1101/2023.08.25.554877openalex-snapshot

Competition and the century-long decline of a once common lizard, Sceloporus consobrinus

inferred← citeshttps://doi.org/10.1101/2023.11.23.568248openalex-snapshot

Phylogeny Inference Under Time-Decaying Migration and Varying Information Content

inferred← citeshttps://doi.org/10.1101/860809openalex-snapshot

The Multispecies Coalescent Model Outperforms Concatenation across Diverse Phylogenomic Data Sets

inferred← citeshttps://doi.org/10.1111/1365-2435.12406openalex-snapshot

Thermoregulatory behaviour limits local adaptation of thermal niches and confers sensitivity to climate change

inferred← citeshttps://doi.org/10.1111/1365-2435.14114openalex-snapshot

Active regulation of ultraviolet light exposure overrides thermal preference behaviour in eastern fence lizards

inferred← citeshttps://doi.org/10.1111/bij.12172openalex-snapshot

Phylogeography of the Trans-Volcanic bunchgrass lizard (Sceloporus bicanthalis) across the highlands of south-eastern Mexico

inferred← citeshttps://doi.org/10.1111/bij.12285openalex-snapshot

Multilocus phylogeography of the Patagonian lizard complexLiolaemus kriegi(Iguania: Liolaemini)

inferred← citeshttps://doi.org/10.1111/brv.12243openalex-snapshot

The effects of sex hormones on immune function: a meta-analysis

inferred← citeshttps://doi.org/10.1111/eth.13402openalex-snapshot

Population differences in multimodal lizard communication are not well explained by habitat or history

inferred← citeshttps://doi.org/10.1111/evo.12280openalex-snapshot

THE INFLUENCE OF SAMPLING DESIGN ON SPECIES TREE INFERENCE: A NEW RELATIONSHIP FOR THE NEW WORLD CHICKADEES (AVES:POECILE)

inferred← citeshttps://doi.org/10.1111/gcb.13476openalex-snapshot

Lizards fail to plastically adjust nesting behavior or thermal tolerance as needed to buffer populations from climate warming

inferred← citeshttps://doi.org/10.1111/j.1095-8312.2011.01644.xopenalex-snapshot

Colonization of novel White Sands habitat is associated with changes in lizard anti-predator behaviour

inferred← citeshttps://doi.org/10.1111/j.1095-8312.2011.01846.xopenalex-snapshot

The roles of pre- and post-hatching growth rates in generating a latitudinal cline of body size in the eastern fence lizard (Sceloporus undulatus)

inferred← citeshttps://doi.org/10.1111/j.1095-8312.2012.01929.xopenalex-snapshot

Inferring the evolutionary history of divergence despite gene flow in a lizard species, Scincella lateralis (Scincidae), composed of cryptic lineages

inferred← citeshttps://doi.org/10.1111/j.1095-8312.2012.01978.xopenalex-snapshot

Miocene divergence, phenotypically cryptic lineages, and contrasting distribution patterns in common lichen-forming fungi (Ascomycota: Parmeliaceae)

inferred← citeshttps://doi.org/10.1111/j.1096-3642.2011.00747.xopenalex-snapshot

Molecular systematics of the Philippine forest skinks (Squamata: Scincidae: Sphenomorphus): testing morphological hypotheses of interspecific relationships

inferred← citeshttps://doi.org/10.1111/j.1096-3642.2011.00801.xopenalex-snapshot

The phylogenetic systematics of blue-tailed skinks (Plestiodon) and the family Scincidae

inferred← citeshttps://doi.org/10.1111/j.1365-2699.2010.02403.xopenalex-snapshot

A time-calibrated phylogenetic approach to assessing the phylogeography, colonization history and phenotypic evolution of snakes in the Japanese Izu Islands

inferred← citeshttps://doi.org/10.1111/j.1365-2699.2012.02780.xopenalex-snapshot

Geographical structure and cryptic lineages within common green iguanas, Iguana iguana

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2010.04676.xopenalex-snapshot

Patterns of persistence and isolation indicate resilience to climate change in montane rainforest lizards

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2010.04722.xopenalex-snapshot

Lizards as model organisms for linking phylogeographic and speciation studies

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2011.05211.xopenalex-snapshot

Refugial isolation and divergence in the Narrowheaded Gartersnake species complex (Thamnophis rufipunctatus) as revealed by multilocus DNA sequence data

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2011.05270.xopenalex-snapshot

Isolation-driven divergence: speciation in a widespread North American songbird (Aves: Certhiidae)

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2012.05747.xopenalex-snapshot

Testing hypotheses for genealogical discordance in a rainforest lizard

inferred← citeshttps://doi.org/10.1111/j.1420-9101.2010.02063.xopenalex-snapshot

Male territoriality and ‘sex confusion’ in recently adapted lizards at White Sands

inferred← citeshttps://doi.org/10.1111/j.1469-7998.2010.00752.xopenalex-snapshot

Male vocalizations, female discrimination and molecular phylogeny: multiple perspectives on the taxonomic status of a critically endangered Caribbean frog

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2010.00993.xopenalex-snapshot

DIVERSIFICATION AND PERSISTENCE AT THE ARID-MONSOONAL INTERFACE: AUSTRALIA-WIDE BIOGEOGRAPHY OF THE BYNOE'S GECKO (HETERONOTIA BINOEI; GEKKONIDAE)

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2012.01640.xopenalex-snapshot

SPECIES DELIMITATION WITH ABC AND OTHER COALESCENT-BASED METHODS: A TEST OF ACCURACY WITH SIMULATIONS AND AN EMPIRICAL EXAMPLE WITH LIZARDS OF THE LIOLAEMUS DARWINII COMPLEX (SQUAMATA: LIOLAEMIDAE)

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2012.01682.xopenalex-snapshot

DEEP DIVERSIFICATION AND LONG-TERM PERSISTENCE IN THE SOUTH AMERICAN ‘DRY DIAGONAL’: INTEGRATING CONTINENT-WIDE PHYLOGEOGRAPHY AND DISTRIBUTION MODELING OF GECKOS

inferred← citeshttps://doi.org/10.1111/jbi.12118openalex-snapshot

Local representation of global diversity in a cosmopolitan lichen‐forming fungal species complex (Rhizoplaca, Ascomycota)

inferred← citeshttps://doi.org/10.1111/jbi.12397openalex-snapshot

Sun skink diversification across the Indian–Southeast Asian biogeographical interface

inferred← citeshttps://doi.org/10.1111/jbi.12645openalex-snapshot

Deep divergence and structure in the Tropical Oceanic Pacific: a multilocus phylogeography of a widespread gekkonid lizard (Squamata: Gekkonidae:Gehyra oceanica)

inferred← citeshttps://doi.org/10.1111/jzo.13104openalex-snapshot

Within‐individual covariation masks an among‐individual performance tradeoff in the prairie lizard

inferred← citeshttps://doi.org/10.1111/jzo.70077openalex-snapshot

Autumn season lizard metabolism is explained by temperature and body mass but does not support cold adaptation across the latitudinal thermal gradient

inferred← citeshttps://doi.org/10.1111/mec.12814openalex-snapshot

Diversification and asymmetrical gene flow across time and space: lineage sorting and hybridization in polytypic barking frogs

inferred← citeshttps://doi.org/10.1111/mec.13122openalex-snapshot

Estimating the temporal and spatial extent of gene flow among sympatric lizard populations (genus Sceloporus ) in the southern Mexican highlands

inferred← citeshttps://doi.org/10.1111/mec.13883openalex-snapshot

The influence of locus number and information content on species delimitation: an empirical test case in an endangered Mexican salamander

inferred← citeshttps://doi.org/10.1111/mec.14295openalex-snapshot

Geographical features are the predominant driver of molecular diversification in widely distributed North American whipsnakes

inferred← citeshttps://doi.org/10.1111/mec.70276openalex-snapshot

Origins of Diversity in the Eastern Gulf Coastal Plain of North America: High Endemism Within a Biodiversity Hotspot

inferred← citeshttps://doi.org/10.1111/zoj.12187openalex-snapshot

Here be dragons: a phylogenetic and biogeographical study of the Smaug warreni species complex (Squamata: Cordylidae) in southern Africa

inferred← citeshttps://doi.org/10.1111/zsc.12281openalex-snapshot

Disintegrating over space and time: Paraphyly and species delimitation in the Wehrle's Salamander complex

inferred← citeshttps://doi.org/10.1111/zsc.70077openalex-snapshot

Striking Suture Zone Mismatch Between Nuclear and Mitochondrial Markers in North African Chalcides ocellatus (Squamata: Scincidae)

inferred← citeshttps://doi.org/10.1159/000293285openalex-snapshot

Chromosome Evolution and Diversification in North American Spiny Lizards (Genus Sceloporus)

inferred← citeshttps://doi.org/10.1163/15685381-bja10163openalex-snapshot

More cryptic diversity among spiny lizards of the Sceloporus torquatus complex discovered through a multilocus approach

inferred← citeshttps://doi.org/10.1163/18759866-08501004openalex-snapshot

Systematics and phylogeny of Sitana (Reptilia: Agamidae) of Peninsular India, with the description of one new genus and five new species

inferred← citeshttps://doi.org/10.1186/1471-2148-10-292openalex-snapshot

Evolutionary history of mammalian sucking lice (Phthiraptera: Anoplura)

inferred← citeshttps://doi.org/10.1186/1471-2148-14-38openalex-snapshot

Discord between morphological and phylogenetic species boundaries: incomplete lineage sorting and recombination results in fuzzy species boundaries in an asexual fungal pathogen

inferred← citeshttps://doi.org/10.1186/s12862-016-0628-xopenalex-snapshot

Phylogenomics of a rapid radiation: is chromosomal evolution linked to increased diversification in north american spiny lizards (Genus Sceloporus)?

inferred← citeshttps://doi.org/10.1371/journal.pone.0025827openalex-snapshot

Multi-Locus Estimates of Population Structure and Migration in a Fence Lizard Hybrid Zone

inferred← citeshttps://doi.org/10.1371/journal.pone.0072506openalex-snapshot

Evolutionary History of the Grey-Faced Sengi, Rhynchocyon udzungwensis, from Tanzania: A Molecular and Species Distribution Modelling Approach

inferred← citeshttps://doi.org/10.1371/journal.pone.0085240openalex-snapshot

Pleistocene Speciation in North American Lichenized Fungi and the Impact of Alternative Species Circumscriptions and Rates of Molecular Evolution on Divergence Estimates

inferred← citeshttps://doi.org/10.1371/journal.pone.0092233openalex-snapshot

Snake and Bird Predation Drive the Repeated Convergent Evolution of Correlated Life History Traits and Phenotype in the Izu Island Scincid Lizard (Plestiodon latiscutatus)

inferred← citeshttps://doi.org/10.1371/journal.pone.0150022openalex-snapshot

Multilocus Phylogeography and Species Delimitation in the Cumberland Plateau Salamander, Plethodon kentucki: Incongruence among Data Sets and Methods

inferred← citeshttps://doi.org/10.1371/journal.pone.0172349openalex-snapshot

One species or four? Yes!...and, no. Or, arbitrary assignment of lineages to species obscures the diversification processes of Neotropical fishes

inferred← citeshttps://doi.org/10.1643/ch-10-058openalex-snapshot

Molecular Systematics of the Leptodeirini (Colubroidea: Dipsadidae) Revisited: Species-tree Analyses and Multi-locus Data

inferred← citeshttps://doi.org/10.1643/ch-16-552openalex-snapshot

Coalescent Species Tree Inference ofColuberandMasticophis

inferred← citeshttps://doi.org/10.1655/herpetologica-d-13-00077openalex-snapshot

A New Species of Horned Lizard (GenusPhrynosoma) from Guerrero, México, with an Updated Multilocus Phylogeny

inferred← citeshttps://doi.org/10.1655/herpetologica-d-13-00083openalex-snapshot

Molecular Phylogeny of the Liolaemus kriegi Complex (Iguania, Liolaemini)

inferred← citeshttps://doi.org/10.1655/herpetologica-d-24-00029openalex-snapshot

Habitat Occupancy of Sceloporus tristichus Lizards is Predicted by Microclimatic Conditions of the Forest Understory

inferred← citeshttps://doi.org/10.1655/herpmonographs-d-11-00012.1openalex-snapshot

Phylogeography of Northern Populations of the Black-Tailed Rattlesnake (Crotalus molossus Baird And Girard, 1853), With the Revalidation of C. ornatus Hallowell, 1854

inferred← citeshttps://doi.org/10.1670/12-156openalex-snapshot

Reproductive Biology ofSceloporus consobrinus(Phrynosomatidae): Male Germ Cell Development and Reproductive Cycle Comparisons within Spiny Lizards

inferred← citeshttps://doi.org/10.1670/19-006openalex-snapshot

Mechanisms Influencing Countergradient Variation in Prairie Lizards, Sceloporus consobrinus

inferred← citeshttps://doi.org/10.2174/092986612798472820openalex-snapshot

PSCL: Predicting Protein Subcellular Localization Based on Optimal Functional Domains

inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.18openalex-snapshot

Model-based approaches to discovering diversity : new implementations, tests of adequacy and an empirical application to central American Diptera

inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.287openalex-snapshot

Systematics and Species Delimitation in New Guinea Skink Species Complexes (Squamata: Scincidae)

inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.3762openalex-snapshot

Evolutionary history of isolation and dispersal in North American ground skinks (Scinella lateralis)

inferred← citeshttps://doi.org/10.3390/d15070881openalex-snapshot

Paleoclimatic Reconstruction Based on the Late Pleistocene San Josecito Cave Stratum 720 Fauna Using Fossil Mammals, Reptiles, and Birds

inferred← citeshttps://doi.org/10.3398/064.081.0412openalex-snapshot

Molecular Identification of Sceloporus Lizards in the Laramie Mountains, Wyoming

inferred← citeshttps://doi.org/10.3732/ajb.1200146openalex-snapshot

Neogene‐dominated diversification in neotropical montane lichens: Dating divergence events in the lichen‐forming fungal genus Oropogon (Parmeliaceae)

inferred← citeshttps://doi.org/10.3732/ajb.1400106openalex-snapshot

Phylogenomics of the carrot genus (Daucus, Apiaceae)

inferred← citeshttps://doi.org/10.3996/122014-jfwm-093openalex-snapshot

Genetic Structure is Inconsistent with Subspecies Designations in the Western Massasauga Sistrurus tergeminus

inferred← citeshttps://doi.org/10.4172/2329-9002.1000114openalex-snapshot

Phylogenetic Model Choice: Justifying a Species Tree or Concatenation Analysis

inferred← citeshttps://doi.org/10.69905/v867s883openalex-snapshot

Inventario de la Herpetofauna de México 2023

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.