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Crystal Structure of Bacillus cereus Class Ib Ribonucleotide Reductase Di-iron NrdF in Complex with NrdI

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Tracking Flavin Conformations in Protein Crystal Structures with Raman Spectroscopy and QM/MM Calculations
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Influence of cell concentration, temperature, and press performance on flow characteristics and disintegration in the freeze‐pressing of Saccharomyces cerevisiae with the X‐press
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Structure, function, and mechanism of ribonucleotide reductases
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How different oxidation states of crystalline myoglobin are influenced by X-rays
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Ribonucleotide reductase class I with different radical generating clusters
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Crystal structure of the biologically active form of class Ib ribonucleotide reductase small subunit from Mycobacterium tuberculosis
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High catalytic activity achieved with a mixed manganese–iron site in protein R2 of Chlamydia ribonucleotide reductase
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The First Holocomplex Structure of Ribonucleotide Reductase Gives New Insight into its Mechanism of Action
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Iron and Free Radical in Ribonucleotide Reductase
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Defining Redox State of X-Ray Crystal Structures by Single-Crystal Ultraviolet–Visible Microspectrophotometry
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Crystal Structure of the Di-iron/Radical Protein of Ribonucleotide Reductase from Corynebacterium ammoniagenes,
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Escherichia coli Class Ib Ribonucleotide Reductase Contains a Dimanganese(III)-Tyrosyl Radical Cofactor in Vivo
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Bacillus subtilis Class Ib Ribonucleotide Reductase Is a Dimanganese(III)-Tyrosyl Radical Enzyme
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The Dimanganese(II) Site of Bacillus subtilis Class Ib Ribonucleotide Reductase
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Circular Dichroism and Magnetic Circular Dichroism Studies of the Biferrous Site of the Class Ib Ribonucleotide Reductase from Bacillus cereus: Comparison to the Class Ia Enzymes
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2.6 Å X-ray Crystal Structure of Human p53R2, a p53-Inducible Ribonucleotide Reductase,
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An Active Dimanganese(III)−Tyrosyl Radical Cofactor in Escherichia coli Class Ib Ribonucleotide Reductase
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Structure of Salmonella typhimurium nrdF Ribonucleotide Reductase in Its Oxidized and Reduced Forms,
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Geometric and Electronic Structure/Function Correlations in Non-Heme Iron Enzymes
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A Tyrosyl−Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes
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Mechanism of Assembly of the Dimanganese-Tyrosyl Radical Cofactor of Class Ib Ribonucleotide Reductase: Enzymatic Generation of Superoxide Is Required for Tyrosine Oxidation via a Mn(III)Mn(IV) Intermediate
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Structure of ribonucleotide reductase protein R1
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Ribonucleotide reductase
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X-ray reduction correlates with soaking accessibility as judged from four non-crystallographically related diiron sites
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Dynamics in transient complexes of redox proteins
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NrdI, a flavodoxin involved in maintenance of the diferric-tyrosyl radical cofactor in Escherichia coli class Ib ribonucleotide reductase
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Structural interconversions modulate activity of Escherichia coli ribonucleotide reductase
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A second class I ribonucleotide reductase in Enterobacteriaceae: characterization of the Salmonella typhimurium enzyme.
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The Active Form of the R2F Protein of Class Ib Ribonucleotide Reductase from Corynebacterium ammoniagenesIs a Diferric Protein
inferredcites →https://doi.org/10.1074/jbc.m006367200openalex-snapshot
Cloning and Characterization of Ribonucleotide Reductase fromChlamydia trachomatis
inferredcites →https://doi.org/10.1074/jbc.m111.278119openalex-snapshot
NrdH-Redoxin Protein Mediates High Enzyme Activity in Manganese-reconstituted Ribonucleotide Reductase from Bacillus anthracis
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Rapid X-ray Photoreduction of Dimetal-Oxygen Cofactors in Ribonucleotide Reductase
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Crystal Structural Studies of Changes in the Native Dinuclear Iron Center of Ribonucleotide Reductase Protein R2 from Mouse
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Oligomerization Status Directs Overall Activity Regulation of the Escherichia coli Class Ia Ribonucleotide Reductase
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The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
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Cryo-protection of protein crystals against radiation damage in electron and X-ray diffraction
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Likelihood-enhanced fast translation functions
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Scaling and assessment of data quality
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An introduction to data reduction: space-group determination, scaling and intensity statistics
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Overview of the CCP 4 suite and current developments
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Refinement of Macromolecular Structures by the Maximum-Likelihood Method
inferredcites →https://doi.org/10.1107/s0907444999009506openalex-snapshot
The Rossmann Fourier autoindexing algorithm in MOSFLM
inferredcites →https://doi.org/10.1107/s0909049508040120openalex-snapshot
A new on-axis multimode spectrometer for the macromolecular crystallography beamlines of the Swiss Light Source
inferredcites →https://doi.org/10.1107/s0909049508040430openalex-snapshot
Absorbed dose calculations for macromolecular crystals: improvements to RADDOSE
inferredcites →https://doi.org/10.1111/j.1742-4658.2010.07815.xopenalex-snapshot
High‐resolution crystal structures of the flavoprotein NrdI in oxidized and reduced states – an unusual flavodoxin
inferredcites →https://doi.org/10.1126/science.1098419openalex-snapshot
The Radical Site in Chlamydial Ribonucleotide Reductase Defines a New R2 Subclass
inferredcites →https://doi.org/10.1126/science.1141179openalex-snapshot
A Manganese(IV)/Iron(III) Cofactor in Chlamydia trachomatis Ribonucleotide Reductase
inferredcites →https://doi.org/10.1126/science.1190187openalex-snapshot
Structural Basis for Activation of Class Ib Ribonucleotide Reductase
inferredcites →https://doi.org/10.1146/annurev-biochem-061408-095817openalex-snapshot
Class I Ribonucleotide Reductases: Metallocofactor Assembly and Repair In Vitro and In Vivo
inferredcites →https://doi.org/10.1146/annurev.biochem.75.103004.142443openalex-snapshot
Ribonucleotide Reductases
inferredcites →https://doi.org/10.1186/1471-2164-10-589openalex-snapshot
RNRdb, a curated database of the universal enzyme family ribonucleotide reductase, reveals a high level of misannotation in sequences deposited to Genbank
inferredcites →https://doi.org/10.1186/1472-6807-8-49openalex-snapshot
HOLLOW: Generating Accurate Representations of Channel and Interior Surfaces in Molecular Structures
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HF-EPR, Raman, UV/VIS Light Spectroscopic, and DFT Studies of the Ribonucleotide Reductase R2 Tyrosyl Radical from Epstein-Barr Virus
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Spectroscopic Studies of the Iron and Manganese Reconstituted Tyrosyl Radical in Bacillus Cereus Ribonucleotide Reductase R2 Protein

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Structural Insights into the Initiation of Free Radical Formation in the Class Ib Ribonucleotide Reductases in Mycobacteria
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Structural Insights into the Initiation of Free Radical Formation in the Class Ib Ribonucleotide Reductases in Mycobacteria
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Assembly of Dimanganese and Heterometallic Manganese Proteins
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A Research‐inspired biochemistry laboratory module–combining expression, purification, crystallization, structure‐solving, and characterization of a flavodoxin‐like protein
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Synthesis, Spectroscopic, Computational, Biological and Molecular docking studies on 3‐allyl 2,6‐diaryl piperidin‐4‐ones
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Ferritin-Like Proteins: A Conserved Core for a Myriad of Enzyme Complexes
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The class Ib ribonucleotide reductase from Mycobacterium tuberculosis has two active R2F subunits
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Class Id ribonucleotide reductase utilizes a Mn2(IV,III) cofactor and undergoes large conformational changes on metal loading
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Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access
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Structure-Function Relationships in Assembly of the Radical-Initiating Cofactors of Class Ia–e Ribonucleotide Reductases
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Structural insights into the initiation of free radical formation in the Class Ib ribonucleotide reductases in Mycobacteria
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Mechanism of DOPA radical generation and transfer in metal-free class Ie ribonucleotide reductase based on density functional theory
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The periodic table of ribonucleotide reductases
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A Structurally Divergent Class Ia Ribonucleotide Reductase from a Tick-Borne Pathogen
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Activation of the Class Ib Ribonucleotide Reductase by a Flavodoxin Reductase in Bacillus cereus
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Bacterial Metallostasis: Metal Sensing, Metalloproteome Remodeling, and Metal Trafficking
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Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens
inferred← citeshttps://doi.org/10.1074/jbc.m113.533554openalex-snapshot
Streptococcus sanguinis Class Ib Ribonucleotide Reductase
inferred← citeshttps://doi.org/10.1074/jbc.m115.675223openalex-snapshot
Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor
inferred← citeshttps://doi.org/10.1074/jbc.r114.596684openalex-snapshot
Choosing the Right Metal: Case Studies of Class I Ribonucleotide Reductases
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Molecular architectures and functions of radical enzymes and their (re)activating proteins
inferred← citeshttps://doi.org/10.1101/2023.06.06.543845openalex-snapshot
Structural insights into the initiation of free radical formation in the Class Ib ribonucleotide reductases
inferred← citeshttps://doi.org/10.64898/2026.06.02.729529openalex-snapshot
CryoEM reveals the dynamic conformational landscape and C-terminal gating mechanism of Mycobacterial Class Ib ribonucleotide reductase
inferred← citeshttps://doi.org/10.7554/elife.79226openalex-snapshot
Redox-controlled reorganization and flavin strain within the ribonucleotide reductase R2b–NrdI complex monitored by serial femtosecond crystallography
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